; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007322 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007322
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box domain LysM domain containing protein
Genome locationscaffold25:2371330..2373324
RNA-Seq ExpressionMS007322
SyntenyMS007322
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR018392 - LysM domain
IPR036047 - F-box-like domain superfamily
IPR036779 - LysM domain superfamily
IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586259.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]9.6e-13388.89Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPE-ADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLK
        MGCCCD+DDDVEILRHL+P+  V SP    P   DSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+K
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPE-ADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLK

Query:  DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP
        DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP

Query:  TTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        TTHHLYG+ T +QGMSSVQV K+VLHSLSRSMMVDDETA+YYLSIS GDPRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

XP_004139174.1 F-box protein At1g55000 [Cucumis sativus]6.5e-13790.33Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD
        MGCCCDQDDDVEILRHLNP+ A+HSP   PP AD S A+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD

Query:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT
        V+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVAVLYLDGIP 
Subjt:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT

Query:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        T HLYGKVT EQGMSSVQVNK+VLHSLSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

XP_022150720.1 F-box protein At1g55000 [Momordica charantia]5.4e-15299.63Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD
        MGCCCDQDDDVEILRHLNPA AVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD

Query:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT
        VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT
Subjt:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT

Query:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

XP_022937590.1 F-box protein At1g55000 [Cucurbita moschata]4.3e-13389.26Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPE-ADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLK
        MGCCCD+DDDVEILRHL+P+  V SP    P   DSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+K
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPE-ADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLK

Query:  DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP
        DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP

Query:  TTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T +QGMSSVQV K+VLHSLSRSMMVDDETA+YYLSIS GDPRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

XP_038877035.1 F-box protein At1g55000 [Benincasa hispida]1.3e-13288.48Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD
        MGCCCDQDDDVEILRHLNP+  V S    PP  DSS  VLSPMNSHF ALSCRDILRLIFE LSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD

Query:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT
        V+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNM+SDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP 
Subjt:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT

Query:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        THHLYGK TCE+GMSSVQVNK+VLH LSRSMMVDDETA+YYLSIS+GDPRAALTEFAEDIRWERH+SIA
Subjt:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

TrEMBL top hitse value%identityAlignment
A0A0A0LFS6 LysM domain-containing protein3.1e-13790.33Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD
        MGCCCDQDDDVEILRHLNP+ A+HSP   PP AD S A+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD

Query:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT
        V+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LINSICYIEMDAIAKREVAVLYLDGIP 
Subjt:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT

Query:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        T HLYGKVT EQGMSSVQVNK+VLHSLSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

A0A5A7TYE5 Lipoxygenase5.6e-11091.28Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD
        MGCCCDQDDDVEILRHLNP+  VHSP   PP AD STA+LSPMNSHFFALSCRDILRLIFE LSIPDLARSSCVCRLW SVASD EIVAGAFKAPWK+KD
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD

Query:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT
        V+GKPSS SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP 
Subjt:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT

Query:  THHLYGKVTCEQGMSSVQ
        T HLYGKVT EQGMSSVQ
Subjt:  THHLYGKVTCEQGMSSVQ

A0A6J1D9A3 F-box protein At1g550002.6e-15299.63Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD
        MGCCCDQDDDVEILRHLNPA AVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKD

Query:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT
        VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT
Subjt:  VIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPT

Query:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

A0A6J1FH66 F-box protein At1g550002.1e-13389.26Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPE-ADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLK
        MGCCCD+DDDVEILRHL+P+  V SP    P   DSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+K
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPE-ADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLK

Query:  DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP
        DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP

Query:  TTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T +QGMSSVQV K+VLHSLSRSMMVDDETA+YYLSIS GDPRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

A0A6J1HS58 F-box protein At1g550002.3e-13288.52Show/hide
Query:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPE-ADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLK
        MGCCCD+DDDVEILRHL+P+  V SP    P    SSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCV RLW SVASD EIV+GAFKAPWK+K
Subjt:  MGCCCDQDDDVEILRHLNPAFAVHSPATLPPE-ADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLK

Query:  DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP
        DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQV+DIKRLNNMMSDHGIYSRER+LIPIGNPNILINSICYIEMDAIAKREVA LYLDGIP
Subjt:  DVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIP

Query:  TTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T +QGMSSVQV K+VLHSLSRSMMVDDETA+YYLSIS GDPRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA

SwissProt top hitse value%identityAlignment
Q5HZA4 LysM and putative peptidoglycan-binding domain-containing protein 16.7e-0432.95Show/hide
Query:  SSGSFWRDNC--LGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPI-GNPNILINSICYIEMDAIAKREV
        S GS  + +C  + +  + H++  GD+LA LA+KY V +  IKR N + ++  I+ ++ L IPI   P  L N +   E +   + EV
Subjt:  SSGSFWRDNC--LGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPI-GNPNILINSICYIEMDAIAKREV

Q9FZ32 F-box protein At1g550007.3e-7560.91Show/hide
Query:  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRL
        AL CRD L +IF+KL++ DLAR+SCVC++W SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQVMDIKRL
Subjt:  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    ++++ SL RSM VDD TA YYL+I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGD

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

Arabidopsis top hitse value%identityAlignment
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein5.2e-7660.91Show/hide
Query:  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRL
        AL CRD L +IF+KL++ DLAR+SCVC++W SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQVMDIKRL
Subjt:  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    ++++ SL RSM VDD TA YYL+I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGD

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.2 peptidoglycan-binding LysM domain-containing protein5.2e-7660.91Show/hide
Query:  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRL
        AL CRD L +IF+KL++ DLAR+SCVC++W SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQVMDIKRL
Subjt:  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    ++++ SL RSM VDD TA YYL+I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGD

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.3 peptidoglycan-binding LysM domain-containing protein5.2e-7660.91Show/hide
Query:  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRL
        AL CRD L +IF+KL++ DLAR+SCVC++W SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQVMDIKRL
Subjt:  ALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGD
        NNMMSDHGIYSR+RLLIPI NP IL N+ CY+E+D  AKREVAVLYL+G P         T +Q   S    ++++ SL RSM VDD TA YYL+I+ GD
Subjt:  NNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARYYLSISHGD

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein8.7e-0740Show/hide
Query:  PSSGS--FWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPI
        PSS S  F   N   +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L IP+
Subjt:  PSSGS--FWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPI

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein9.6e-0641.27Show/hide
Query:  PSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPI
        PSS S     C G   I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Subjt:  PSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGCTGTTGCGATCAAGACGACGACGTTGAGATCTTGAGGCACCTCAATCCCGCGTTCGCCGTTCACTCTCCGGCCACCTTACCTCCGGAGGCGGATTCCTCCAC
CGCCGTATTATCTCCGATGAACTCCCACTTCTTCGCCCTATCGTGCCGCGACATCCTACGCCTCATCTTCGAGAAGCTTTCGATTCCCGACTTGGCTCGTTCCAGCTGCG
TCTGCCGTCTCTGGCAGTCGGTTGCTTCCGATCATGAGATCGTCGCCGGAGCTTTCAAAGCTCCTTGGAAACTAAAAGACGTGATCGGGAAGCCCAGCTCCGGTAGCTTC
TGGAGAGACAATTGTCTCGGAAAGTTTGCGATCTCCCATCGGATTCTCCGCGGCGATAGCTTGGCAAGTCTAGCCGTCAAGTATTCGGTTCAGGTTATGGACATAAAACG
TCTAAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGAAATCCCAATATACTTATTAACAGTATATGCTACATCGAGATGGATG
CGATCGCGAAACGGGAAGTTGCAGTGTTGTATTTGGATGGCATCCCGACAACCCATCATCTGTATGGTAAGGTGACATGTGAACAGGGTATGTCCTCTGTTCAAGTGAAT
AAGCAGGTACTTCATTCTTTGAGTCGGAGCATGATGGTGGATGATGAAACCGCTCGATATTACTTGTCCATTTCCCATGGAGATCCTCGAGCTGCTCTCACAGAATTCGC
CGAGGACATTAGGTGGGAGAGGCATATGAGCATTGCC
mRNA sequenceShow/hide mRNA sequence
ATGGGATGCTGTTGCGATCAAGACGACGACGTTGAGATCTTGAGGCACCTCAATCCCGCGTTCGCCGTTCACTCTCCGGCCACCTTACCTCCGGAGGCGGATTCCTCCAC
CGCCGTATTATCTCCGATGAACTCCCACTTCTTCGCCCTATCGTGCCGCGACATCCTACGCCTCATCTTCGAGAAGCTTTCGATTCCCGACTTGGCTCGTTCCAGCTGCG
TCTGCCGTCTCTGGCAGTCGGTTGCTTCCGATCATGAGATCGTCGCCGGAGCTTTCAAAGCTCCTTGGAAACTAAAAGACGTGATCGGGAAGCCCAGCTCCGGTAGCTTC
TGGAGAGACAATTGTCTCGGAAAGTTTGCGATCTCCCATCGGATTCTCCGCGGCGATAGCTTGGCAAGTCTAGCCGTCAAGTATTCGGTTCAGGTTATGGACATAAAACG
TCTAAACAACATGATGAGCGACCATGGCATATACTCGAGAGAAAGATTGTTAATCCCCATTGGAAATCCCAATATACTTATTAACAGTATATGCTACATCGAGATGGATG
CGATCGCGAAACGGGAAGTTGCAGTGTTGTATTTGGATGGCATCCCGACAACCCATCATCTGTATGGTAAGGTGACATGTGAACAGGGTATGTCCTCTGTTCAAGTGAAT
AAGCAGGTACTTCATTCTTTGAGTCGGAGCATGATGGTGGATGATGAAACCGCTCGATATTACTTGTCCATTTCCCATGGAGATCCTCGAGCTGCTCTCACAGAATTCGC
CGAGGACATTAGGTGGGAGAGGCATATGAGCATTGCC
Protein sequenceShow/hide protein sequence
MGCCCDQDDDVEILRHLNPAFAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSF
WRDNCLGKFAISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVN
KQVLHSLSRSMMVDDETARYYLSISHGDPRAALTEFAEDIRWERHMSIA