; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007339 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007339
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor bHLH94-like
Genome locationscaffold25:2512444..2513570
RNA-Seq ExpressionMS007339
SyntenyMS007339
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139191.1 transcription factor bHLH94 [Cucumis sativus]2.1e-12378.4Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP
        MALEAVV+ QDPL Y+GSKDLYSL GGGIW+ G F       DFPENQTENFPF DWNSSSSV    PSP+AA SRNGL+     PPLEAES TP+P+RP
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP

Query:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS
        R+RRPK+RKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKELEQ+VQ LST  +++KGK +  S+    +S+S+S
Subjt:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS

Query:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL
        +S IPF+EFFSFPQF AMEGC  V E  TQCSS +ADIEVTMVENHANLKIRSKRRPKQ+LK+VAGLHSLSLSVLHLNIST++QI LYCLSVKVEDDCKL
Subjt:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL

Query:  TSVDEIASALHQLLSRIEEDSLMN
        +SVDEIASALHQLLSRIEEDSLMN
Subjt:  TSVDEIASALHQLLSRIEEDSLMN

XP_008454918.1 PREDICTED: transcription factor bHLH94-like [Cucumis melo]7.3e-12478.7Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP
        MALEAVV+ QDPL Y+GSKDLYSL GGGIW+ GSF       DFPENQTENFPF DWNSSSSV    PSP+AA SRNGL+     PPLEAES TP+P+RP
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP

Query:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS
        R+RRPK+RKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKELEQ+VQ LST  +++KGK +  S+    +S+S+S
Subjt:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS

Query:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL
        +S IPF+EFFSFPQF AMEGC  V E  TQCSS +ADIEVTMVENHANLKIRSKRRPKQ+LK+VAGLHSLSLSVLHLNIST++QI LYCLSVKVEDDCKL
Subjt:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL

Query:  TSVDEIASALHQLLSRIEEDSLMN
        +SVDEIASALHQLLSRIEEDSLMN
Subjt:  TSVDEIASALHQLLSRIEEDSLMN

XP_022150737.1 transcription factor bHLH96-like [Momordica charantia]1.7e-16599.68Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPLEAESRTPNPVRPRRRRPKTRK
        MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPLEAESRTPNPVRPRRRRPKTRK
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPLEAESRTPNPVRPRRRRPKTRK

Query:  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSSSSHIPFSEF
        NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSSSSHIPFSEF
Subjt:  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSSSSHIPFSEF

Query:  FSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASAL
        FSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMV+NHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASAL
Subjt:  FSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASAL

Query:  HQLLSRIEEDSLMN
        HQLLSRIEEDSLMN
Subjt:  HQLLSRIEEDSLMN

XP_022946286.1 transcription factor bHLH94-like isoform X2 [Cucurbita moschata]1.4e-11473.46Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLAPSP---DAAISRNGLIFSDPNPPLEAESRTPNPVR
        MALEAVV+         S+DLY+ FGGGIW+ GSF       DFPE QTEN+PF DWNSSSSVL P P   + AISR        NPPLEAESRTPNP+R
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLAPSP---DAAISRNGLIFSDPNPPLEAESRTPNPVR

Query:  PRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSS
        PR+RRPK+RKNKE+IENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKELEQ+VQ LST +  +KG                
Subjt:  PRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSS

Query:  SSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL
        SSS  PFSEFF+FPQF +MEGCCS+GE  TQCSSIADIEVTMVENHANLKIRSKRRPKQ LK+VAGLHSL LSVLHLNIST++QI LYCLSVKVEDDCKL
Subjt:  SSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL

Query:  TSVDEIASALHQLLSRIEEDSLMN
         SVDEIASALHQLL RIEE+S+MN
Subjt:  TSVDEIASALHQLLSRIEEDSLMN

XP_022999125.1 transcription factor bHLH94-like [Cucurbita maxima]1.1e-11473.46Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLAPSP---DAAISRNGLIFSDPNPPLEAESRTPNPVR
        MALEAVV+         S+DLY+ FGGGIW+ GSF       DFPE QTENFPF DWNSSSSV  P P   + AISR        NPPLEAESRTPNP+R
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLAPSP---DAAISRNGLIFSDPNPPLEAESRTPNPVR

Query:  PRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSS
        PR+RRPK+RKNKE+IENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKELEQ+VQ LST ++ +KG                
Subjt:  PRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSS

Query:  SSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL
        SSS  PFSEFF+FPQF +MEGCCS+GE  TQCSSIADIEVTMVENHANLKIRSKRRPKQ LK+VAGLHSL LSVLHLNIST++QI LYCLSVKVEDDCKL
Subjt:  SSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL

Query:  TSVDEIASALHQLLSRIEEDSLMN
         SVDEIASALHQLL RIEE+S+MN
Subjt:  TSVDEIASALHQLLSRIEEDSLMN

TrEMBL top hitse value%identityAlignment
A0A0A0LIK9 Helix-loop-helix-like protein1.0e-12378.4Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP
        MALEAVV+ QDPL Y+GSKDLYSL GGGIW+ G F       DFPENQTENFPF DWNSSSSV    PSP+AA SRNGL+     PPLEAES TP+P+RP
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP

Query:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS
        R+RRPK+RKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKELEQ+VQ LST  +++KGK +  S+    +S+S+S
Subjt:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS

Query:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL
        +S IPF+EFFSFPQF AMEGC  V E  TQCSS +ADIEVTMVENHANLKIRSKRRPKQ+LK+VAGLHSLSLSVLHLNIST++QI LYCLSVKVEDDCKL
Subjt:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL

Query:  TSVDEIASALHQLLSRIEEDSLMN
        +SVDEIASALHQLLSRIEEDSLMN
Subjt:  TSVDEIASALHQLLSRIEEDSLMN

A0A1S3C0F1 transcription factor bHLH94-like3.5e-12478.7Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP
        MALEAVV+ QDPL Y+GSKDLYSL GGGIW+ GSF       DFPENQTENFPF DWNSSSSV    PSP+AA SRNGL+     PPLEAES TP+P+RP
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP

Query:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS
        R+RRPK+RKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKELEQ+VQ LST  +++KGK +  S+    +S+S+S
Subjt:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS

Query:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL
        +S IPF+EFFSFPQF AMEGC  V E  TQCSS +ADIEVTMVENHANLKIRSKRRPKQ+LK+VAGLHSLSLSVLHLNIST++QI LYCLSVKVEDDCKL
Subjt:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL

Query:  TSVDEIASALHQLLSRIEEDSLMN
        +SVDEIASALHQLLSRIEEDSLMN
Subjt:  TSVDEIASALHQLLSRIEEDSLMN

A0A5A7U2P2 Transcription factor bHLH94-like3.5e-12478.7Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP
        MALEAVV+ QDPL Y+GSKDLYSL GGGIW+ GSF       DFPENQTENFPF DWNSSSSV    PSP+AA SRNGL+     PPLEAES TP+P+RP
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLA--PSPDAAISRNGLIFSDPNPPLEAESRTPNPVRP

Query:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS
        R+RRPK+RKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKELEQ+VQ LST  +++KGK +  S+    +S+S+S
Subjt:  RRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSS

Query:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL
        +S IPF+EFFSFPQF AMEGC  V E  TQCSS +ADIEVTMVENHANLKIRSKRRPKQ+LK+VAGLHSLSLSVLHLNIST++QI LYCLSVKVEDDCKL
Subjt:  SSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSS-IADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL

Query:  TSVDEIASALHQLLSRIEEDSLMN
        +SVDEIASALHQLLSRIEEDSLMN
Subjt:  TSVDEIASALHQLLSRIEEDSLMN

A0A6J1DBJ5 transcription factor bHLH96-like8.3e-16699.68Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPLEAESRTPNPVRPRRRRPKTRK
        MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPLEAESRTPNPVRPRRRRPKTRK
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPLEAESRTPNPVRPRRRRPKTRK

Query:  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSSSSHIPFSEF
        NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSSSSHIPFSEF
Subjt:  NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSSSSHIPFSEF

Query:  FSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASAL
        FSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMV+NHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASAL
Subjt:  FSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASAL

Query:  HQLLSRIEEDSLMN
        HQLLSRIEEDSLMN
Subjt:  HQLLSRIEEDSLMN

A0A6J1KEF4 transcription factor bHLH94-like5.1e-11573.46Show/hide
Query:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLAPSP---DAAISRNGLIFSDPNPPLEAESRTPNPVR
        MALEAVV+         S+DLY+ FGGGIW+ GSF       DFPE QTENFPF DWNSSSSV  P P   + AISR        NPPLEAESRTPNP+R
Subjt:  MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSF-------DFPENQTENFPFGDWNSSSSVLAPSP---DAAISRNGLIFSDPNPPLEAESRTPNPVR

Query:  PRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSS
        PR+RRPK+RKNKE+IENQRMTHIAVERNRRKQMNEYLSVLRSLMP+SYVQRGDQASIIGGAINFVKELEQ+VQ LST ++ +KG                
Subjt:  PRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSS

Query:  SSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL
        SSS  PFSEFF+FPQF +MEGCCS+GE  TQCSSIADIEVTMVENHANLKIRSKRRPKQ LK+VAGLHSL LSVLHLNIST++QI LYCLSVKVEDDCKL
Subjt:  SSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKL

Query:  TSVDEIASALHQLLSRIEEDSLMN
         SVDEIASALHQLL RIEE+S+MN
Subjt:  TSVDEIASALHQLLSRIEEDSLMN

SwissProt top hitse value%identityAlignment
Q56XR0 Transcription factor bHLH712.9e-4645.19Show/hide
Query:  PSPDAAISRNGL--IFSDPNPPLEAESRTPNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVK
        P  D  IS+N +  I +   PP      T    + RRR+P+  KN+EE ENQRMTHIAVERNRR+QMN++LSVLRSLMP  +  +GDQASI+GGAI+F+K
Subjt:  PSPDAAISRNGL--IFSDPNPPLEAESRTPNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVK

Query:  ELEQKVQFLSTAQ-MDSKGKNSEASSNSSSSSSSSSSSHIP----FSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRR-----
        ELE K+  L   +  ++K   S  SS S  S+    + H P     S+FF      + E     G   +  + + D+EVT++E HAN++I S+RR     
Subjt:  ELEQKVQFLSTAQ-MDSKGKNSEASSNSSSSSSSSSSSHIP----FSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRR-----

Query:  ------PKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEED
              P Q+ K+VA L SLSLS+LHL+++T+D  A+Y +S KVE+ C+L+SVD+IA A+H +LS IEE+
Subjt:  ------PKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEED

Q56YJ8 Transcription factor FAMA1.9e-3744.17Show/hide
Query:  EAESRTPNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEA
        E ++ T   V+ +R+R +T K  EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SYVQRGDQASIIGGAI FV+ELEQ +Q L     +S+ +    
Subjt:  EAESRTPNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEA

Query:  SSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGG--------TQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNIST
               +++++SS  P +   +  Q   + G  +  EGG           S +AD+EV ++   A +KI S+RRP Q++K +A L  L LS+LH NI+T
Subjt:  SSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGG--------TQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNIST

Query:  MDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEEDS
        M+Q  LY  +VK+  + + T+ ++IAS++ Q+ S I  ++
Subjt:  MDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEEDS

Q9C7T4 Transcription factor bHLH968.0e-5746.01Show/hide
Query:  MALEAVVYPQDPLIYSGSKD--LYSLFGGGIWSGGSFDFPEN----QTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNP---PLEAESRTP-----
        MALEAVVYPQDP  Y   KD   Y L+          D   N    Q +   F   N +      S D   +   L +    P    ++ ES+ P     
Subjt:  MALEAVVYPQDPLIYSGSKD--LYSLFGGGIWSGGSFDFPEN----QTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNP---PLEAESRTP-----

Query:  -NPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSS
            R +RRR ++ KNKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP  Y QRGDQASI+GGAIN++KELE  +Q   + +   K    +  +    
Subjt:  -NPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSS

Query:  SSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVE
        + ++S+SS  PFS+FF+FPQ+S      +  EG      +A+IEVTMVE+HA+LKI +K+RP+Q+LK+V+ + SL L++LHLN++T D   LY +SVKVE
Subjt:  SSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVE

Query:  DDCKLTSVDEIASALHQLLSRIEEDS
        +  +L +V++IA+A++Q+L RIEE+S
Subjt:  DDCKLTSVDEIASALHQLLSRIEEDS

Q9M128 Transcription factor bHLH571.2e-4147.01Show/hide
Query:  EAESRTPN---PVRPRRRRPKTR--KNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFL-STAQMDSK
        E + RT N    V+ +R+R +TR  KNK+E+ENQRMTHIAVERNRR+QMNE+L+ LRSLMP S++QRGDQASI+GGAI+F+KELEQ +Q L +  + D  
Subjt:  EAESRTPN---PVRPRRRRPKTR--KNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFL-STAQMDSK

Query:  GKNSEASSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMD
         +  + +S SSSSS + ++S I      S   F+A  G      GG       ++E T+++NH +LK+R KR  +Q+LK +  +  L L++LHL IS+  
Subjt:  GKNSEASSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMD

Query:  QIALYCLSVKVEDDCKLTSVDEIASALHQLLSRI
           +Y  ++K+ED CKL S DEIA+A+HQ+  +I
Subjt:  QIALYCLSVKVEDDCKLTSVDEIASALHQLLSRI

Q9SK91 Transcription factor bHLH941.1e-5345.29Show/hide
Query:  MALEAVVYPQDPLIYSGS------KDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPL---------EAESRT
        M LEAVVYPQDP  Y  +       DLYS            +F    T+N      +  S V     D    R+   +    P L         + ES  
Subjt:  MALEAVVYPQDPLIYSGS------KDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPL---------EAESRT

Query:  PNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLS---TAQMDSKGKNSEASSN
        P   R +RRR +  KNKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+VKELE  +Q +    T   D KG        
Subjt:  PNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLS---TAQMDSKGKNSEASSN

Query:  SSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSV
             +S+SS   PF++FFSFPQ+S      S  +     SS A+IEVT+ E+HAN+KI +K++P+Q+LK++  L SL L++LHLN++T+    LY +SV
Subjt:  SSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSV

Query:  KVEDDCKLTSVDEIASALHQLLSRIEEDS
        +VE+  +L +VD+IA+AL+Q + RI+E++
Subjt:  KVEDDCKLTSVDEIASALHQLLSRIEEDS

Arabidopsis top hitse value%identityAlignment
AT1G22490.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.7e-5545.29Show/hide
Query:  MALEAVVYPQDPLIYSGS------KDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPL---------EAESRT
        M LEAVVYPQDP  Y  +       DLYS            +F    T+N      +  S V     D    R+   +    P L         + ES  
Subjt:  MALEAVVYPQDPLIYSGS------KDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPL---------EAESRT

Query:  PNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLS---TAQMDSKGKNSEASSN
        P   R +RRR +  KNKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+VKELE  +Q +    T   D KG        
Subjt:  PNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLS---TAQMDSKGKNSEASSN

Query:  SSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSV
             +S+SS   PF++FFSFPQ+S      S  +     SS A+IEVT+ E+HAN+KI +K++P+Q+LK++  L SL L++LHLN++T+    LY +SV
Subjt:  SSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSV

Query:  KVEDDCKLTSVDEIASALHQLLSRIEEDS
        +VE+  +L +VD+IA+AL+Q + RI+E++
Subjt:  KVEDDCKLTSVDEIASALHQLLSRIEEDS

AT1G72210.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein5.7e-5846.01Show/hide
Query:  MALEAVVYPQDPLIYSGSKD--LYSLFGGGIWSGGSFDFPEN----QTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNP---PLEAESRTP-----
        MALEAVVYPQDP  Y   KD   Y L+          D   N    Q +   F   N +      S D   +   L +    P    ++ ES+ P     
Subjt:  MALEAVVYPQDPLIYSGSKD--LYSLFGGGIWSGGSFDFPEN----QTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNP---PLEAESRTP-----

Query:  -NPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSS
            R +RRR ++ KNKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP  Y QRGDQASI+GGAIN++KELE  +Q   + +   K    +  +    
Subjt:  -NPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSS

Query:  SSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVE
        + ++S+SS  PFS+FF+FPQ+S      +  EG      +A+IEVTMVE+HA+LKI +K+RP+Q+LK+V+ + SL L++LHLN++T D   LY +SVKVE
Subjt:  SSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVE

Query:  DDCKLTSVDEIASALHQLLSRIEEDS
        +  +L +V++IA+A++Q+L RIEE+S
Subjt:  DDCKLTSVDEIASALHQLLSRIEEDS

AT3G24140.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.3e-3844.17Show/hide
Query:  EAESRTPNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEA
        E ++ T   V+ +R+R +T K  EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SYVQRGDQASIIGGAI FV+ELEQ +Q L     +S+ +    
Subjt:  EAESRTPNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEA

Query:  SSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGG--------TQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNIST
               +++++SS  P +   +  Q   + G  +  EGG           S +AD+EV ++   A +KI S+RRP Q++K +A L  L LS+LH NI+T
Subjt:  SSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGG--------TQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNIST

Query:  MDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEEDS
        M+Q  LY  +VK+  + + T+ ++IAS++ Q+ S I  ++
Subjt:  MDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEEDS

AT4G01460.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.8e-4347.01Show/hide
Query:  EAESRTPN---PVRPRRRRPKTR--KNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFL-STAQMDSK
        E + RT N    V+ +R+R +TR  KNK+E+ENQRMTHIAVERNRR+QMNE+L+ LRSLMP S++QRGDQASI+GGAI+F+KELEQ +Q L +  + D  
Subjt:  EAESRTPN---PVRPRRRRPKTR--KNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFL-STAQMDSK

Query:  GKNSEASSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMD
         +  + +S SSSSS + ++S I      S   F+A  G      GG       ++E T+++NH +LK+R KR  +Q+LK +  +  L L++LHL IS+  
Subjt:  GKNSEASSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMD

Query:  QIALYCLSVKVEDDCKLTSVDEIASALHQLLSRI
           +Y  ++K+ED CKL S DEIA+A+HQ+  +I
Subjt:  QIALYCLSVKVEDDCKLTSVDEIASALHQLLSRI

AT5G46690.1 beta HLH protein 712.0e-4745.19Show/hide
Query:  PSPDAAISRNGL--IFSDPNPPLEAESRTPNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVK
        P  D  IS+N +  I +   PP      T    + RRR+P+  KN+EE ENQRMTHIAVERNRR+QMN++LSVLRSLMP  +  +GDQASI+GGAI+F+K
Subjt:  PSPDAAISRNGL--IFSDPNPPLEAESRTPNPVRPRRRRPKTRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVK

Query:  ELEQKVQFLSTAQ-MDSKGKNSEASSNSSSSSSSSSSSHIP----FSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRR-----
        ELE K+  L   +  ++K   S  SS S  S+    + H P     S+FF      + E     G   +  + + D+EVT++E HAN++I S+RR     
Subjt:  ELEQKVQFLSTAQ-MDSKGKNSEASSNSSSSSSSSSSSHIP----FSEFFSFPQFSAMEGCCSVGEGGTQCSSIADIEVTMVENHANLKIRSKRR-----

Query:  ------PKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEED
              P Q+ K+VA L SLSLS+LHL+++T+D  A+Y +S KVE+ C+L+SVD+IA A+H +LS IEE+
Subjt:  ------PKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTAGAAGCTGTGGTTTATCCTCAAGACCCATTAATTTACAGCGGCAGCAAAGATCTCTACAGCTTGTTTGGAGGAGGGATTTGGAGCGGTGGGAGCTTCGATTT
TCCCGAGAACCAAACAGAAAATTTCCCATTTGGCGATTGGAACTCCTCATCCTCTGTTTTGGCTCCTTCCCCCGACGCCGCCATTTCGAGAAATGGGTTGATTTTCAGCG
ACCCAAATCCGCCATTGGAGGCCGAATCAAGAACTCCGAATCCAGTTCGACCGAGAAGAAGAAGACCCAAAACCAGAAAGAACAAAGAGGAAATCGAGAATCAGAGAATG
ACCCACATTGCAGTTGAACGAAATCGAAGAAAACAGATGAATGAGTACCTCTCTGTTCTTCGATCCCTAATGCCAGATTCTTATGTCCAAAGGGGGGACCAAGCTTCAAT
CATTGGGGGTGCTATAAATTTCGTGAAGGAGCTTGAGCAGAAAGTTCAATTTCTCTCCACAGCTCAAATGGATTCGAAGGGGAAGAATTCAGAAGCTTCTTCAAATTCTT
CTTCTTCTTCTTCATCTTCTTCTTCCTCACACATCCCTTTCTCTGAGTTCTTCAGCTTCCCTCAGTTCTCAGCAATGGAGGGTTGTTGTTCTGTGGGTGAAGGTGGGACC
CAGTGCTCCTCCATTGCTGATATTGAAGTAACAATGGTGGAAAATCATGCAAACTTGAAAATCAGGTCAAAGAGAAGGCCTAAACAGGTGCTGAAAATGGTGGCTGGCTT
GCATTCTCTCTCCCTCTCTGTTCTTCATCTCAATATCTCTACTATGGACCAAATTGCCCTCTACTGTCTCAGTGTTAAGGTTGAAGATGATTGCAAGCTGACTTCTGTTG
ATGAAATTGCTTCTGCTCTGCATCAGTTGCTTTCTAGAATAGAAGAAGATTCACTCATGAAC
mRNA sequenceShow/hide mRNA sequence
ATGGCACTAGAAGCTGTGGTTTATCCTCAAGACCCATTAATTTACAGCGGCAGCAAAGATCTCTACAGCTTGTTTGGAGGAGGGATTTGGAGCGGTGGGAGCTTCGATTT
TCCCGAGAACCAAACAGAAAATTTCCCATTTGGCGATTGGAACTCCTCATCCTCTGTTTTGGCTCCTTCCCCCGACGCCGCCATTTCGAGAAATGGGTTGATTTTCAGCG
ACCCAAATCCGCCATTGGAGGCCGAATCAAGAACTCCGAATCCAGTTCGACCGAGAAGAAGAAGACCCAAAACCAGAAAGAACAAAGAGGAAATCGAGAATCAGAGAATG
ACCCACATTGCAGTTGAACGAAATCGAAGAAAACAGATGAATGAGTACCTCTCTGTTCTTCGATCCCTAATGCCAGATTCTTATGTCCAAAGGGGGGACCAAGCTTCAAT
CATTGGGGGTGCTATAAATTTCGTGAAGGAGCTTGAGCAGAAAGTTCAATTTCTCTCCACAGCTCAAATGGATTCGAAGGGGAAGAATTCAGAAGCTTCTTCAAATTCTT
CTTCTTCTTCTTCATCTTCTTCTTCCTCACACATCCCTTTCTCTGAGTTCTTCAGCTTCCCTCAGTTCTCAGCAATGGAGGGTTGTTGTTCTGTGGGTGAAGGTGGGACC
CAGTGCTCCTCCATTGCTGATATTGAAGTAACAATGGTGGAAAATCATGCAAACTTGAAAATCAGGTCAAAGAGAAGGCCTAAACAGGTGCTGAAAATGGTGGCTGGCTT
GCATTCTCTCTCCCTCTCTGTTCTTCATCTCAATATCTCTACTATGGACCAAATTGCCCTCTACTGTCTCAGTGTTAAGGTTGAAGATGATTGCAAGCTGACTTCTGTTG
ATGAAATTGCTTCTGCTCTGCATCAGTTGCTTTCTAGAATAGAAGAAGATTCACTCATGAAC
Protein sequenceShow/hide protein sequence
MALEAVVYPQDPLIYSGSKDLYSLFGGGIWSGGSFDFPENQTENFPFGDWNSSSSVLAPSPDAAISRNGLIFSDPNPPLEAESRTPNPVRPRRRRPKTRKNKEEIENQRM
THIAVERNRRKQMNEYLSVLRSLMPDSYVQRGDQASIIGGAINFVKELEQKVQFLSTAQMDSKGKNSEASSNSSSSSSSSSSSHIPFSEFFSFPQFSAMEGCCSVGEGGT
QCSSIADIEVTMVENHANLKIRSKRRPKQVLKMVAGLHSLSLSVLHLNISTMDQIALYCLSVKVEDDCKLTSVDEIASALHQLLSRIEEDSLMN