| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037436.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.6e-22 | 43.07 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPL-DFIPTFCKFGSSKSGWFHIIKFKELIS
RNFL + + ++L RW +T PK GGLGI + +NTALL KW+WRF + SLW +I AKY + DF PT K+ S K+ W IIK
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPL-DFIPTFCKFGSSKSGWFHIIKFKELIS
Query: NEIQRQI-SGRNTSFWHHNWTGRGLLCSLLPRFFALS
N +I G N SFWH NW G L + PR + LS
Subjt: NEIQRQI-SGRNTSFWHHNWTGRGLLCSLLPRFFALS
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| KAA0058554.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.2e-22 | 44.53 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-S
RNFL +G K SHL+ W VT PK++GGLGI ++ N ALLSK +WR+ ++P SLW LI KY K IP+ SSK+ W II + S
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-S
Query: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
N +G SFW+ NW+ G L + PR FALSL
Subjt: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
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| TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.2e-24 | 43.8 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-S
RNFL +G K SHL+ W VT PK++GGLGI ++ N ALLSKW+WR+ ++P SLW LI KY K +P+ SSK+ W II + S
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-S
Query: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
N+ +G SFW+ NW+ G L + PR FALS+
Subjt: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
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| TYK05690.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 1.2e-22 | 43.07 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELIS-
RNFL +G K SHL+ W VT PK++GGLGI ++ N ALLSKW+WR+ ++P SLW LI KY K +P+ SSK+ W II E
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELIS-
Query: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
N+ +G SFW NW+ G L + R FALS+
Subjt: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
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| TYK05808.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 7.0e-23 | 41.61 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELISN
RNFL +G K SHL+ W VT K++GGLGI ++ +N ALLSKW+WR+ ++P SLW LI KY K IP+ SSK+ W II + +
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELISN
Query: EIQRQISGRN-TSFWHHNWTGRGLLCSLLPRFFALSL
++ + SFW+ NW+ G L + PR FALS+
Subjt: EIQRQISGRN-TSFWHHNWTGRGLLCSLLPRFFALSL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UTS4 LINE-1 retrotransposable element ORF2 protein | 5.8e-23 | 44.53 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-S
RNFL +G K SHL+ W VT PK++GGLGI ++ N ALLSK +WR+ ++P SLW LI KY K IP+ SSK+ W II + S
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-S
Query: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
N +G SFW+ NW+ G L + PR FALSL
Subjt: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
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| A0A5A7UWW1 LINE-1 retrotransposable element ORF2 protein | 7.6e-23 | 42.42 | Show/hide |
Query: EGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-SNEIQR
+G K SHL+ W VT PK++GGLGI ++ N ALLSKW+WR+ ++P SLW LI KY K +P+ SSK+ W II + SN+
Subjt: EGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-SNEIQR
Query: QISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
+G SFW+ NW+ G L + PR FALS+
Subjt: QISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
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| A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein | 1.1e-24 | 43.8 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-S
RNFL +G K SHL+ W VT PK++GGLGI ++ N ALLSKW+WR+ ++P SLW LI KY K +P+ SSK+ W II + S
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELI-S
Query: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
N+ +G SFW+ NW+ G L + PR FALS+
Subjt: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
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| A0A5D3C2W8 LINE-1 retrotransposable element ORF2 protein | 5.8e-23 | 43.07 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELIS-
RNFL +G K SHL+ W VT PK++GGLGI ++ N ALLSKW+WR+ ++P SLW LI KY K +P+ SSK+ W II E
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELIS-
Query: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
N+ +G SFW NW+ G L + R FALS+
Subjt: NEIQRQISGRNTSFWHHNWTGRGLLCSLLPRFFALSL
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| A0A5D3C3M3 LINE-1 retrotransposable element ORF2 protein | 3.4e-23 | 41.61 | Show/hide |
Query: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELISN
RNFL +G K SHL+ W VT K++GGLGI ++ +N ALLSKW+WR+ ++P SLW LI KY K IP+ SSK+ W II + +
Subjt: RNFLLEGCDNFKSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKSGWFHIIKFKELISN
Query: EIQRQISGRN-TSFWHHNWTGRGLLCSLLPRFFALSL
++ + SFW+ NW+ G L + PR FALS+
Subjt: EIQRQISGRN-TSFWHHNWTGRGLLCSLLPRFFALSL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | 3.7e-06 | 30 | Show/hide |
Query: VTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKS------GWFHIIKFKELISNEIQRQI-SGRNTSFW
V LPK +GGLG+ NT L K +WR + GSLW + + D + KF +S+ W +++ + L ++ I +G FW
Subjt: VTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKS------GWFHIIKFKELISNEIQRQI-SGRNTSFW
Query: HHNWTGRGLL
NWT G L
Subjt: HHNWTGRGLL
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| AT4G29090.1 Ribonuclease H-like superfamily protein | 1.2e-09 | 28.95 | Show/hide |
Query: KSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFK------PLDFIPTFCKFGSSKSGWFHIIKFKELISNEIQRQ
K H WD ++ K +GG+G I++ N ALL K +WR ++ P SL + + K++Y K PL P+F W I +E++ +
Subjt: KSSHLVRWDFVTLPKDDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFK------PLDFIPTFCKFGSSKSGWFHIIKFKELISNEIQRQ
Query: I-SGRNTSFWHHNW
+ +G + W H W
Subjt: I-SGRNTSFWHHNW
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| ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein | 6.2e-09 | 33.61 | Show/hide |
Query: FLLEGCDNFKSSHLVRWDFVTLPK-DDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKS-GWFHIIKFKELISN
F C+N + V W + K DDGGLG + N ALL+K +R I P +L S L++++Y F + C G+ S W II +EL+S
Subjt: FLLEGCDNFKSSHLVRWDFVTLPK-DDGGLGIGKIDSMNTALLSKWIWRFITDPGSLWSSLIKAKYSFKPLDFIPTFCKFGSSKS-GWFHIIKFKELISN
Query: EIQRQI-SGRNTSFWHHNW
+ R I G +T W W
Subjt: EIQRQI-SGRNTSFWHHNW
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