; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007459 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007459
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationscaffold447:157307..158300
RNA-Seq ExpressionMS007459
SyntenyMS007459
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]2.8e-10093.81Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWSTSDRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-SGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPY
        GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS  GGGG GRYGPDRNGDRFGGRNRSSGDRGGSGSDR++RDRSGPY
Subjt:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-SGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPY

Query:  ERRSSCGFRS
        ERR S GFRS
Subjt:  ERRSSCGFRS

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]5.7e-10192.45Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWSTSDRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSG
        GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY      GGGGSGRYGPDRNGDRFGGRNRS+GDRGGSGSDR++RDRSG
Subjt:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSG

Query:  PYERRSSCGFRS
        PYERR S GFRS
Subjt:  PYERRSSCGFRS

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]1.7e-10899.03Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEEVEYRCFIGGLSWSTSDR LKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERR
        RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERR
Subjt:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERR

Query:  SSCGFRS
        SS GFRS
Subjt:  SSCGFRS

XP_022988948.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]4.1e-9992.42Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSG--GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYE
        RDHDRDRNRDFGGGRGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS G  GGGSGRYGPDRNGDR GGRNR +GDRGGSGSDR++RDRSGPYE
Subjt:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSG--GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYE

Query:  RRS--SCGFRS
        RRS  S GFRS
Subjt:  RRS--SCGFRS

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]9.8e-10193.33Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWSTSDRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--SGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPY
        GRDHDRDR RD GG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS   GGGGSGRYGPDRNGDRFGGRNRS+GDRGGSGSDR++RDRSGPY
Subjt:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS--SGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPY

Query:  ERRSSCGFRS
        ERR S GFRS
Subjt:  ERRSSCGFRS

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein1.4e-10093.81Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWSTSDRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-SGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPY
        GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKYS  GGGG GRYGPDRNGDRFGGRNRSSGDRGGSGSDR++RDRSGPY
Subjt:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYS-SGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPY

Query:  ERRSSCGFRS
        ERR S GFRS
Subjt:  ERRSSCGFRS

A0A1S3C164 glycine-rich RNA-binding protein RZ1A2.8e-10192.45Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWSTSDRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSG
        GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY      GGGGSGRYGPDRNGDRFGGRNRS+GDRGGSGSDR++RDRSG
Subjt:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY----SSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSG

Query:  PYERRSSCGFRS
        PYERR S GFRS
Subjt:  PYERRSSCGFRS

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A8.1e-10999.03Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEEVEYRCFIGGLSWSTSDR LKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERR
        RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERR
Subjt:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERR

Query:  SSCGFRS
        SS GFRS
Subjt:  SSCGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like2.9e-9891.9Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS-SGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYER
        RD++RDRNRDFGGGRGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS  GGGGSGRYGPDRNGDR GGRNR +GDRGGSGSDR++RDRSGPYER
Subjt:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS-SGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYER

Query:  RS--SCGFRS
        RS  S GFRS
Subjt:  RS--SCGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like2.0e-9992.42Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSG--GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYE
        RDHDRDRNRDFGGGRGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKYS G  GGGSGRYGPDRNGDR GGRNR +GDRGGSGSDR++RDRSGPYE
Subjt:  RDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSG--GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYE

Query:  RRS--SCGFRS
        RRS  S GFRS
Subjt:  RRS--SCGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A3.3e-2746.15Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G +L++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGRSITV++AQ ++GSG    G        
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSG
             R  GGG  S  G  +  G  G+        GGR G Y G    YSS GGG G YG    G R GG     G  GG G
Subjt:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSG

Q03250 Glycine-rich RNA-binding protein 78.8e-2844.15Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGR------YGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSG
                GGG     G  ++ G  G ++    S GG GGR      Y G    YSS GGG G YG    G R GG     G+ GG G
Subjt:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGR------YGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C1.1e-2540.5Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQG--SGRDHDGDRP
        MA +   R F+GGLS   +DR L+ AF +FG +L+ ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G   G  H     
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQG--SGRDHDGDRP

Query:  RGRDHDRDRNRDFGGGRGS----NSGDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDR
        R   +       FGGG G        +CFKCG+ GH+AR+CPS  GGRGG  GG   + S+ GG  GR     + DR+  R R   DR    +    RDR
Subjt:  RGRDHDRDRNRDFGGGRGS----NSGDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDR

Q99070 Glycine-rich RNA-binding protein 22.8e-2641.75Show/hide
Query:  AEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGR
        A +VEYRCF+GGL+W+T++  L++AF  FG ++++KV+ D+ +GRSRGFGFVTF  +++M +AI+ MNG +LDGR+ITV++AQ   G G           
Subjt:  AEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGR

Query:  DHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDD---KYSSG--GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHN
                  GGG G   G        G+  RE    GG GG YGGR +    Y  G  GGG G YG    G  +GG     G+RG SG +  N
Subjt:  DHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDD---KYSSG--GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHN

Q9LIN3 Glycine-rich RNA-binding protein RZ1A1.4e-6558Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+E+ EYRCFIGGL+W+TSDRGL++AFEK+GHL+EAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSSG
         R +DRDR+R   GGRG   GDCFKCGKPGHFARECPSE  R G                                            RY  +DD+Y S 
Subjt:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSSG

Query:  GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERRSSCGF
         GG  RYGPDR+G+R GGR+R  G RG  G +RH+R    PY+R  + GF
Subjt:  GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERRSSCGF

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 26.2e-2944.15Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGR------YGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSG
                GGG     G  ++ G  G ++    S GG GGR      Y G    YSS GGG G YG    G R GG     G+ GG G
Subjt:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGR------YGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSG

AT2G21660.2 cold, circadian rhythm, and rna binding 22.6e-2746.71Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG    G   RG   
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGG--RDDKYSSGGGGSGRYGPDRNG
               +GGG G   G     G  G ++    S GG GG YGG  R+     GGG  G YG    G
Subjt:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGG--RDDKYSSGGGGSGRYGPDRNG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain9.8e-6758Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+E+ EYRCFIGGL+W+TSDRGL++AFEK+GHL+EAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSSG
         R +DRDR+R   GGRG   GDCFKCGKPGHFARECPSE  R G                                            RY  +DD+Y S 
Subjt:  GRDHDRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGG--------------------------------------------RYGGRDDKYSSG

Query:  GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERRSSCGF
         GG  RYGPDR+G+R GGR+R  G RG  G +RH+R    PY+R  + GF
Subjt:  GGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERRSSCGF

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.3e-2645.41Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG    G   RG   
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGR---YGPDRNGDRFGGRNRSSGDRGGSG
                GGG  S  G  +  G  G ++      GG GG Y  R   Y SGGGG GR    G  R G  +GG +  S   GG G
Subjt:  DRDRNRDFGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGR---YGPDRNGDRFGGRNRSSGDRGGSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain7.6e-2740.5Show/hide
Query:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQG--SGRDHDGDRP
        MA +   R F+GGLS   +DR L+ AF +FG +L+ ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G   G  H     
Subjt:  MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQG--SGRDHDGDRP

Query:  RGRDHDRDRNRDFGGGRGS----NSGDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDR
        R   +       FGGG G        +CFKCG+ GH+AR+CPS  GGRGG  GG   + S+ GG  GR     + DR+  R R   DR    +    RDR
Subjt:  RGRDHDRDRNRDFGGGRGS----NSGDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGAGGTGGAGTATCGCTGCTTTATTGGTGGCCTTTCATGGTCAACGTCTGACAGAGGCCTGAAAGAAGCGTTTGAAAAGTTTGGCCATCTTCTCGAGGCCAA
GGTAGTTGTTGACAAGTTTTCTGGACGTTCCCGTGGTTTTGGCTTCGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATAAAAGCCATGAATGGAATGGATTTAG
ATGGCCGGAGTATTACTGTTGATAAGGCTCAGCCAAACCAAGGTTCGGGTAGAGATCATGATGGCGATCGTCCACGTGGTCGTGATCATGATCGTGATCGAAATCGAGAT
TTTGGCGGTGGACGTGGATCTAACAGTGGAGATTGTTTTAAATGTGGGAAGCCTGGACATTTTGCTCGGGAGTGTCCTAGTGAAGGTGGTAGAGGAGGTAGGTATGGTGG
TAGGGATGACAAATATAGTAGTGGTGGTGGTGGCAGTGGTCGTTATGGTCCTGATCGAAATGGAGATCGATTTGGCGGGCGCAATAGGAGTAGTGGTGATCGAGGAGGTT
CAGGAAGCGATCGACATAATCGTGACCGGTCTGGGCCATATGAGCGACGCAGTTCTTGTGGTTTTCGTTCT
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAGAGGTGGAGTATCGCTGCTTTATTGGTGGCCTTTCATGGTCAACGTCTGACAGAGGCCTGAAAGAAGCGTTTGAAAAGTTTGGCCATCTTCTCGAGGCCAA
GGTAGTTGTTGACAAGTTTTCTGGACGTTCCCGTGGTTTTGGCTTCGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATAAAAGCCATGAATGGAATGGATTTAG
ATGGCCGGAGTATTACTGTTGATAAGGCTCAGCCAAACCAAGGTTCGGGTAGAGATCATGATGGCGATCGTCCACGTGGTCGTGATCATGATCGTGATCGAAATCGAGAT
TTTGGCGGTGGACGTGGATCTAACAGTGGAGATTGTTTTAAATGTGGGAAGCCTGGACATTTTGCTCGGGAGTGTCCTAGTGAAGGTGGTAGAGGAGGTAGGTATGGTGG
TAGGGATGACAAATATAGTAGTGGTGGTGGTGGCAGTGGTCGTTATGGTCCTGATCGAAATGGAGATCGATTTGGCGGGCGCAATAGGAGTAGTGGTGATCGAGGAGGTT
CAGGAAGCGATCGACATAATCGTGACCGGTCTGGGCCATATGAGCGACGCAGTTCTTGTGGTTTTCGTTCT
Protein sequenceShow/hide protein sequence
MAEEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGRDHDRDRNRD
FGGGRGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYSSGGGGSGRYGPDRNGDRFGGRNRSSGDRGGSGSDRHNRDRSGPYERRSSCGFRS