; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007466 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007466
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHeavy metal-associated isoprenylated plant protein 3-like
Genome locationscaffold447:285379..286576
RNA-Seq ExpressionMS007466
SyntenyMS007466
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily
IPR044526 - Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031499.1 heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo var. makuwa]3.7e-4770.12Show/hide
Query:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADV----NANGVDRVRFASNGVNYLRLV-ASPSLSIRSEGRLPAVKQP-VSTLSSSP---ENVFQV
        KKLGGFTCHS   TAVCI A+PRSA VV RRLARAD     +AN  +R R  SN V Y +LV +SPSLS+RSEG+   +K+P +  + SSP    NVF V
Subjt:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADV----NANGVDRVRFASNGVNYLRLV-ASPSLSIRSEGRLPAVKQP-VSTLSSSP---ENVFQV

Query:  VVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP
        VV+RVALHCQGCASKV+RHL+KMEG VTSFSIDLEAKRVTVMGHISP GVL+SISKVKRAELWP
Subjt:  VVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP

KAG7011417.1 Protein SODIUM POTASSIUM ROOT DEFECTIVE 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-4568.52Show/hide
Query:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARA----DVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSS----PENVFQVV
        KKLGGF C SP ATAVCI A+PRSAVV  R LARA    + NANG +RVR  SN V Y +L  SPS    ++     VK+PV+ + SS    PENVF VV
Subjt:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARA----DVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSS----PENVFQVV

Query:  VLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
        V++VALHCQGCASKV+RHLTKMEG VTSFSIDLEAKRVTVMGHISP GVLES+SKVKRAELW
Subjt:  VLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

XP_022154425.1 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like [Momordica charantia]7.6e-7798.09Show/hide
Query:  KKKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALH
        KKKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALH
Subjt:  KKKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALH

Query:  CQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWPM
        CQGCASKV+RHLTKMEG VTSFSIDLEAKRVTVMG ISPHGVLESISKVKRAELWPM
Subjt:  CQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWPM

XP_022967633.1 heavy metal-associated isoprenylated plant protein 35-like [Cucurbita maxima]3.2e-4367.5Show/hide
Query:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARAD--VNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSS----PENVFQVVVL
        KKLGGF CHSP ATAVCI A+PRSA VV   LARA+   N NG+ RVR  +N V Y +L  SPS    ++     VK+PV+ + SS    PENVF VVV+
Subjt:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARAD--VNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSS----PENVFQVVVL

Query:  RVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
        +VALHCQGCASKV+RHLTKMEG VTSFSIDLEAK+VTVMGHISP GVLES+SKVKRAELW
Subjt:  RVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

XP_038888352.1 heavy metal-associated isoprenylated plant protein 35-like [Benincasa hispida]7.4e-4872.96Show/hide
Query:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADV--NANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVST-LSSSPENVFQVVVLRVA
        KKLGGF CHSP ATAVCI A+PRSA VV RRLARAD   NAN  +R R  SN V Y +LV S +LS+RS      +K+ V   LS  PENVF VVV+RVA
Subjt:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADV--NANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVST-LSSSPENVFQVVVLRVA

Query:  LHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWPM
        LHCQGCASKV+RHL KMEG VTSFSIDLEAKRVTVMGHISP GVLESISKVKRAELWPM
Subjt:  LHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWPM

TrEMBL top hitse value%identityAlignment
A0A0A0K2I2 HMA domain-containing protein5.0e-4266.67Show/hide
Query:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADV----NANGVDR-VRFASNG-VNYLRLV-ASPSLSIRSEGRLPAVKQP-VSTLSSSP---ENVF
        KKLGGF CHS   TAVCI ++PRS  VV RRLAR D     +AN  +R  RF SN  V Y +LV +SPSLS+RSEG+   +K+P +  + SSP    NVF
Subjt:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADV----NANGVDR-VRFASNG-VNYLRLV-ASPSLSIRSEGRLPAVKQP-VSTLSSSP---ENVF

Query:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
         VVV+RVALHCQGCASKV+RHL++MEG VTSFSIDLEAKRVTVMGHISP GVL+SISKVKRAELW
Subjt:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

A0A5A7SQB0 Heavy metal-associated isoprenylated plant protein 3-like1.8e-4770.12Show/hide
Query:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADV----NANGVDRVRFASNGVNYLRLV-ASPSLSIRSEGRLPAVKQP-VSTLSSSP---ENVFQV
        KKLGGFTCHS   TAVCI A+PRSA VV RRLARAD     +AN  +R R  SN V Y +LV +SPSLS+RSEG+   +K+P +  + SSP    NVF V
Subjt:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADV----NANGVDRVRFASNGVNYLRLV-ASPSLSIRSEGRLPAVKQP-VSTLSSSP---ENVFQV

Query:  VVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP
        VV+RVALHCQGCASKV+RHL+KMEG VTSFSIDLEAKRVTVMGHISP GVL+SISKVKRAELWP
Subjt:  VVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP

A0A6J1DJK2 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like3.7e-7798.09Show/hide
Query:  KKKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALH
        KKKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALH
Subjt:  KKKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALH

Query:  CQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWPM
        CQGCASKV+RHLTKMEG VTSFSIDLEAKRVTVMG ISPHGVLESISKVKRAELWPM
Subjt:  CQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWPM

A0A6J1HJ48 protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like1.1e-4167.74Show/hide
Query:  CHSPTATAVCISANPRSAVVVPRRLARA----DVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSS----PENVFQVVVLRVALH
        C SP ATAVCI A+PRSAVV  R LARA    + NANG +RVR  SN V Y +L  SPS    ++     VK+PV+ + SS    PENVF VVV++VALH
Subjt:  CHSPTATAVCISANPRSAVVVPRRLARA----DVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSS----PENVFQVVVLRVALH

Query:  CQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
        CQGCASKV+RHLTKMEG VTSFSIDLEAKRVTVMGHISP GVLES+SKVKRAELW
Subjt:  CQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

A0A6J1HVM5 heavy metal-associated isoprenylated plant protein 35-like1.6e-4367.5Show/hide
Query:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARAD--VNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSS----PENVFQVVVL
        KKLGGF CHSP ATAVCI A+PRSA VV   LARA+   N NG+ RVR  +N V Y +L  SPS    ++     VK+PV+ + SS    PENVF VVV+
Subjt:  KKLGGFTCHSPTATAVCISANPRSAVVVPRRLARAD--VNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSS----PENVFQVVVL

Query:  RVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
        +VALHCQGCASKV+RHLTKMEG VTSFSIDLEAK+VTVMGHISP GVLES+SKVKRAELW
Subjt:  RVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

SwissProt top hitse value%identityAlignment
O82089 Copper transport protein CCH4.9e-1047.06Show/hide
Query:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKV-KRAELWPM
        Q VVL+V + CQGC   V R L KMEG V SF ID++ ++VTV G++ P  V +++SK  K+   WP+
Subjt:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKV-KRAELWPM

Q58FZ0 Protein SODIUM POTASSIUM ROOT DEFECTIVE 23.5e-1663.08Show/hide
Query:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
        QVVVL+V+LHC+GC  KVR+HL +M+G VTSF+ID  AK+VTV G I+P  +L+SISKVK A+ W
Subjt:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

Q8LDS4 Protein SODIUM POTASSIUM ROOT DEFECTIVE 11.9e-1755.17Show/hide
Query:  PAVKQPVSTLSSSPE---NVFQVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP
        P    P S+  S PE   +  QVVVLRV+LHC+GCA KV++HL+K++G VTS++ID  AK+VTV G ++P  VL SISKVK A+ WP
Subjt:  PAVKQPVSTLSSSPE---NVFQVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP

Q8RXH8 Protein SODIUM POTASSIUM ROOT DEFECTIVE 39.5e-1456.76Show/hide
Query:  SSPENVFQVVVLRVAL--HCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
        SS     QVVVLRV+L  HC+GC  KV++HL+KM+G VTSF+ID  +K+VTV G I+P  VL  +SKVK A+ W
Subjt:  SSPENVFQVVVLRVAL--HCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

Q94BT9 Copper transport protein ATX11.4e-0946.97Show/hide
Query:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKV-KRAELW
        Q VVLRVA+ C+GC   V+R L KMEG V SF +D++ ++VTV G++ P  VL++++K  K+   W
Subjt:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKV-KRAELW

Arabidopsis top hitse value%identityAlignment
AT2G28660.1 Chloroplast-targeted copper chaperone protein1.8e-2050.98Show/hide
Query:  RLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP
        R V S + S  S           +  S +P    QVVVLRV++HC+GC  KVR+H++KMEG VTS++IDL  K+VTV+G I+P G++ESISKVK A+LWP
Subjt:  RLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP

Query:  MS
         S
Subjt:  MS

AT2G37390.1 Chloroplast-targeted copper chaperone protein2.5e-1763.08Show/hide
Query:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
        QVVVL+V+LHC+GC  KVR+HL +M+G VTSF+ID  AK+VTV G I+P  +L+SISKVK A+ W
Subjt:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

AT2G37390.2 Chloroplast-targeted copper chaperone protein2.5e-1763.08Show/hide
Query:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW
        QVVVL+V+LHC+GC  KVR+HL +M+G VTSF+ID  AK+VTV G I+P  +L+SISKVK A+ W
Subjt:  QVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELW

AT5G02600.1 Heavy metal transport/detoxification superfamily protein1.3e-1855.17Show/hide
Query:  PAVKQPVSTLSSSPE---NVFQVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP
        P    P S+  S PE   +  QVVVLRV+LHC+GCA KV++HL+K++G VTS++ID  AK+VTV G ++P  VL SISKVK A+ WP
Subjt:  PAVKQPVSTLSSSPE---NVFQVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP

AT5G02600.2 Heavy metal transport/detoxification superfamily protein1.3e-1855.17Show/hide
Query:  PAVKQPVSTLSSSPE---NVFQVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP
        P    P S+  S PE   +  QVVVLRV+LHC+GCA KV++HL+K++G VTS++ID  AK+VTV G ++P  VL SISKVK A+ WP
Subjt:  PAVKQPVSTLSSSPE---NVFQVVVLRVALHCQGCASKVRRHLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAGAAGCTTGGAGGGTTCACGTGCCACTCCCCGACCGCCACCGCGGTCTGCATCTCCGCCAATCCCCGCTCCGCGGTGGTTGTGCCGAGGAGGCTGGCTAGAGCTGA
TGTTAATGCCAATGGTGTCGACCGCGTTAGGTTCGCGAGCAATGGTGTGAACTACTTGAGGCTTGTTGCATCTCCGAGCTTGAGCATTCGCAGTGAGGGAAGGCTGCCCG
CCGTAAAGCAACCAGTGTCGACACTTTCTTCTTCACCGGAGAATGTCTTTCAGGTGGTGGTTTTGAGGGTGGCGCTTCATTGTCAAGGCTGTGCTAGTAAGGTTAGGAGA
CATCTCACCAAGATGGAAGGTAGGGTGACATCATTCAGCATAGATCTTGAGGCAAAGAGAGTGACTGTGATGGGACATATCTCACCGCACGGTGTTTTGGAGAGTATTTC
TAAGGTGAAAAGGGCCGAGTTATGGCCAATGTCGTTAAAC
mRNA sequenceShow/hide mRNA sequence
AAGAAGAAGCTTGGAGGGTTCACGTGCCACTCCCCGACCGCCACCGCGGTCTGCATCTCCGCCAATCCCCGCTCCGCGGTGGTTGTGCCGAGGAGGCTGGCTAGAGCTGA
TGTTAATGCCAATGGTGTCGACCGCGTTAGGTTCGCGAGCAATGGTGTGAACTACTTGAGGCTTGTTGCATCTCCGAGCTTGAGCATTCGCAGTGAGGGAAGGCTGCCCG
CCGTAAAGCAACCAGTGTCGACACTTTCTTCTTCACCGGAGAATGTCTTTCAGGTGGTGGTTTTGAGGGTGGCGCTTCATTGTCAAGGCTGTGCTAGTAAGGTTAGGAGA
CATCTCACCAAGATGGAAGGTAGGGTGACATCATTCAGCATAGATCTTGAGGCAAAGAGAGTGACTGTGATGGGACATATCTCACCGCACGGTGTTTTGGAGAGTATTTC
TAAGGTGAAAAGGGCCGAGTTATGGCCAATGTCGTTAAAC
Protein sequenceShow/hide protein sequence
KKKLGGFTCHSPTATAVCISANPRSAVVVPRRLARADVNANGVDRVRFASNGVNYLRLVASPSLSIRSEGRLPAVKQPVSTLSSSPENVFQVVVLRVALHCQGCASKVRR
HLTKMEGRVTSFSIDLEAKRVTVMGHISPHGVLESISKVKRAELWPMSLN