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MS007547 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007547
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncilia- and flagella-associated protein 251-like
Genome locationscaffold401:24414..24677
RNA-Seq ExpressionMS007547
SyntenyMS007547
Gene Ontology termsGO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]1.1e-0542.31Show/hide
Query:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK
        ++  Q+++V +L S+ EV+N R   K   EKQSQE L+KN PP ISLE++D +VD +K +E     E++D  ++ K K
Subjt:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK

KAE8650946.1 hypothetical protein Csa_001290 [Cucumis sativus]8.6e-0639.58Show/hide
Query:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVD--IDKVVEYA---------INHEKEDADQDGKGKEKEKEVN
        ++  Q+++V +L S+ EV+N R P K   EKQS+ESL+KN PPS+SLE++D ++D  ID+ V YA         I++++   D D   + K K V+
Subjt:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVD--IDKVVEYA---------INHEKEDADQDGKGKEKEKEVN

KAE8651836.1 hypothetical protein Csa_006724 [Cucumis sativus]6.6e-0644.87Show/hide
Query:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVD--IDKVVEYAIN--HEKEDADQD
        ++  Q+++V +L S+ EV+N + P K   EKQS+ESL+KN PPS SLE++D ++D  ID+ V YA +   +KE  D D
Subjt:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVD--IDKVVEYAIN--HEKEDADQD

TYK08201.1 40S ribosomal protein S15-4 [Cucumis melo var. makuwa]1.1e-0542.31Show/hide
Query:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK
        ++  Q+++V +L S+ EV+N R   K   EKQSQE L+KN PP ISLE++D +VD +K +E     E++D  ++ K K
Subjt:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK

XP_022156699.1 cilia- and flagella-associated protein 251-like [Momordica charantia]1.1e-3291.95Show/hide
Query:  QEIRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGKEKEKEVN
        QEIRSVQKQM GMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPS SL+LLD+EVDIDK+V+YAINHEKEDADQDGKGKEKEKE N
Subjt:  QEIRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGKEKEKEVN

TrEMBL top hitse value%identityAlignment
A0A5A7VE89 Protein Ycf2-like5.4e-0642.31Show/hide
Query:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK
        ++  Q+++V +L S+ EV+N R   K   EKQSQE L+KN PP ISLE++D +VD +K +E     E++D  ++ K K
Subjt:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK

A0A5A7VIA9 Uncharacterized protein5.4e-0642.31Show/hide
Query:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK
        ++  Q+++V +L S+ EV+N R   K   EKQSQE L+KN PP ISLE++D +VD +K +E     E++D  ++ K K
Subjt:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK

A0A5D3C8N2 40S ribosomal protein S15-45.4e-0642.31Show/hide
Query:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK
        ++  Q+++V +L S+ EV+N R   K   EKQSQE L+KN PP ISLE++D +VD +K +E     E++D  ++ K K
Subjt:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK

A0A5D3DFX6 Uncharacterized protein5.4e-0642.31Show/hide
Query:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK
        ++  Q+++V +L S+ EV+N R   K   EKQSQE L+KN PP ISLE++D +VD +K +E     E++D  ++ K K
Subjt:  IRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGK

A0A6J1DUB5 cilia- and flagella-associated protein 251-like5.2e-3391.95Show/hide
Query:  QEIRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGKEKEKEVN
        QEIRSVQKQM GMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPS SL+LLD+EVDIDK+V+YAINHEKEDADQDGKGKEKEKE N
Subjt:  QEIRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGKEKEKEVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAGAAATTAGAAGTGTCCAGAAACAAATGGTGGGGATGTTGACTTCTATATTAGAAGTAATCAATGATAGATTTCCACCGAAATCAAACATTGAAAAACAATCCCAAGA
ATCACTTCAGAAGAACGTACCTCCATCGATAAGTCTTGAGCTTCTTGACGAAGAAGTAGATATTGATAAAGTTGTGGAATATGCAATCAATCATGAGAAAGAGGATGCAG
ATCAGGATGGGAAAGGGAAAGAAAAGGAAAAAGAGGTAAATCTA
mRNA sequenceShow/hide mRNA sequence
CAAGAAATTAGAAGTGTCCAGAAACAAATGGTGGGGATGTTGACTTCTATATTAGAAGTAATCAATGATAGATTTCCACCGAAATCAAACATTGAAAAACAATCCCAAGA
ATCACTTCAGAAGAACGTACCTCCATCGATAAGTCTTGAGCTTCTTGACGAAGAAGTAGATATTGATAAAGTTGTGGAATATGCAATCAATCATGAGAAAGAGGATGCAG
ATCAGGATGGGAAAGGGAAAGAAAAGGAAAAAGAGGTAAATCTA
Protein sequenceShow/hide protein sequence
QEIRSVQKQMVGMLTSILEVINDRFPPKSNIEKQSQESLQKNVPPSISLELLDEEVDIDKVVEYAINHEKEDADQDGKGKEKEKEVNL