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MS007554 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007554
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold401:115513..115671
RNA-Seq ExpressionMS007554
SyntenyMS007554
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW74568.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.3e-0949.06Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN
        GPTPF+FEN WLQHH+F      WW      GW GH F++KL+ ++  +K+WN
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN

RVX20162.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.3e-0950.94Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN
        GPTPF+FEN WLQHHSF+     WW      GW GH F++KL+ ++  +K WN
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN

TYK17996.1 reverse transcriptase [Cucumis melo var. makuwa]1.0e-0949.06Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN
        GP PF+FEN+WL   SF P+++ WW N+ + GWP HG + KLK L+  ++ WN
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN

XP_022158956.1 uncharacterized protein LOC111025405 [Momordica charantia]7.5e-1357.69Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIW
        G TPF+FEN WL H +F P ++ WW N PL GWPGHG + KLK L+  IK+W
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIW

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]7.7e-1048.08Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIW
        GP+PF+FEN WL++ SF    + WW N  + GW G  FIQKL+G+++ +K+W
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIW

TrEMBL top hitse value%identityAlignment
A0A438GQW5 LINE-1 retrotransposable element ORF2 protein6.4e-1049.06Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN
        GPTPF+FEN WLQHH+F      WW      GW GH F++KL+ ++  +K+WN
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN

A0A438KG26 Transposon TX1 uncharacterized 149 kDa protein1.1e-0950.94Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN
        GPTPF+FEN WLQHHSF+     WW      GW GH F++KL+ ++  +K WN
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN

A0A5D3D3Q8 Reverse transcriptase4.9e-1049.06Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN
        GP PF+FEN+WL   SF P+++ WW N+ + GWP HG + KLK L+  ++ WN
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN

A0A6J1E2G6 uncharacterized protein LOC1110254053.6e-1357.69Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIW
        G TPF+FEN WL H +F P ++ WW N PL GWPGHG + KLK L+  IK+W
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIW

A5B7Z9 Reverse transcriptase domain-containing protein (Fragment)1.1e-0950.94Show/hide
Query:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN
        GPTPF+FEN WLQHHSF+     WW      GW GH F++KL+ ++  +K WN
Subjt:  GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGCCCACCCCTTTCCAGTTTGAGAATGCATGGTTGCAGCATCACTCCTTCTCGCCTATGATCAAATATTGGTGGGCAAATTCTCCCCTAAGGGGCTGGCCGGGACATGG
CTTCATACAGAAACTAAAGGGGCTGGAGGAAGGGATCAAAATCTGGAAC
mRNA sequenceShow/hide mRNA sequence
GGGCCCACCCCTTTCCAGTTTGAGAATGCATGGTTGCAGCATCACTCCTTCTCGCCTATGATCAAATATTGGTGGGCAAATTCTCCCCTAAGGGGCTGGCCGGGACATGG
CTTCATACAGAAACTAAAGGGGCTGGAGGAAGGGATCAAAATCTGGAAC
Protein sequenceShow/hide protein sequence
GPTPFQFENAWLQHHSFSPMIKYWWANSPLRGWPGHGFIQKLKGLEEGIKIWN