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MS007555 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007555
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGPI-anchor transamidase isoform X1
Genome locationscaffold401:117413..117604
RNA-Seq ExpressionMS007555
SyntenyMS007555
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062564.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]1.8e-0550Show/hide
Query:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        KALLS++WFE N+RIF GK     E   IAK  A+ WC+ +  F  YS   L +NW AFI
Subjt:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]4.1e-0543.33Show/hide
Query:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        KALL E+W ERN+RIF  K R   E    A   A+ WC     F +YS   +C+NW  F+
Subjt:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

TYK28784.1 GPI-anchor transamidase isoform X1 [Cucumis melo var. makuwa]1.8e-0550Show/hide
Query:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        KALLS++WFE N+RIF GK     E   IAK  A+ WC+ +  F  YS   L +NW AFI
Subjt:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]8.4e-1162.3Show/hide
Query:  IKALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        +KALLSELWFERN R+FE K R   E F  AKFKAS WC   D F  +SPSM+  NW AFI
Subjt:  IKALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]3.0e-0852.46Show/hide
Query:  IKALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        +KALL++LWFERN+RIF  K  S  +    A+ +AS WC+ SD F +YS S   +NWEAFI
Subjt:  IKALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

TrEMBL top hitse value%identityAlignment
A0A5A7V5N8 GPI-anchor transamidase isoform X18.8e-0650Show/hide
Query:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        KALLS++WFE N+RIF GK     E   IAK  A+ WC+ +  F  YS   L +NW AFI
Subjt:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

A0A5D3DC06 Mediator of RNA polymerase II transcription subunit 8 isoform X22.6e-0549.12Show/hide
Query:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKA-SQWCVRSDLFSSYSPSMLCMNW
        KALLSELWFERN+ IF GK +  +E    AK  A   WC  +  F  YS   +C+NW
Subjt:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKA-SQWCVRSDLFSSYSPSMLCMNW

A0A5D3DE60 zf-RVT domain-containing protein2.0e-0543.33Show/hide
Query:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        KALL E+W ERN+RIF  K R   E    A   A+ WC     F +YS   +C+NW  F+
Subjt:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

A0A5D3DZ52 GPI-anchor transamidase isoform X18.8e-0650Show/hide
Query:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        KALLS++WFE N+RIF GK     E   IAK  A+ WC+ +  F  YS   L +NW AFI
Subjt:  KALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

A0A6J1DIE2 uncharacterized protein LOC1110207654.1e-1162.3Show/hide
Query:  IKALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI
        +KALLSELWFERN R+FE K R   E F  AKFKAS WC   D F  +SPSM+  NW AFI
Subjt:  IKALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAAAAGCTCTTCTTTCCGAATTATGGTTTGAGAGAAATGAACGAATATTTGAAGGCAAGAATCGATCTCCTATGGAGTGTTTCTCAATCGCCAAATTCAAAGCCTCCCA
ATGGTGTGTTCGTTCCGACCTCTTCTCTTCTTATTCTCCTAGTATGCTTTGTATGAATTGGGAGGCTTTTATAATTCCCCTT
mRNA sequenceShow/hide mRNA sequence
ATAAAAGCTCTTCTTTCCGAATTATGGTTTGAGAGAAATGAACGAATATTTGAAGGCAAGAATCGATCTCCTATGGAGTGTTTCTCAATCGCCAAATTCAAAGCCTCCCA
ATGGTGTGTTCGTTCCGACCTCTTCTCTTCTTATTCTCCTAGTATGCTTTGTATGAATTGGGAGGCTTTTATAATTCCCCTT
Protein sequenceShow/hide protein sequence
IKALLSELWFERNERIFEGKNRSPMECFSIAKFKASQWCVRSDLFSSYSPSMLCMNWEAFIIPL