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MS007567 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007567
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF641 domain-containing protein
Genome locationscaffold401:259655..259917
RNA-Seq ExpressionMS007567
SyntenyMS007567
Gene Ontology termsGO:0009639 - response to red or far red light (biological process)
GO:0009959 - negative gravitropism (biological process)
InterPro domainsIPR040225 - Protein gravitropic in the light 1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4380595.1 hypothetical protein G4B88_008746 [Cannabis sativa]5.0e-2262.07Show/hide
Query:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        S+ C  KY+LV+HP+M+AS FGNLD+RTLV   K+P TPFYQIFA++A  VW+LQGIA S +PKA  F V   SKFSD YME+V+ D
Subjt:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

KAF4389583.1 hypothetical protein F8388_009716 [Cannabis sativa]5.0e-2262.07Show/hide
Query:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        S+ C  KY+LV+HP+M+AS FGNLD+RTLV   K+P TPFYQIFA++A  VW+LQGIA S +PKA  F V   SKFSD YME+V+ D
Subjt:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

XP_022997720.1 protein GRAVITROPIC IN THE LIGHT 1 [Cucurbita maxima]1.5e-2368.6Show/hide
Query:  QICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        + C+ KY+LV+HP+M+AS FGNLDHRTLVQC K+P T FYQIFA++A  VWIL GIA S N KAE FVVRS+SKF DT+ME+VK D
Subjt:  QICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

XP_023521973.1 protein GRAVITROPIC IN THE LIGHT 1-like [Cucurbita pepo subsp. pepo]1.3e-2267.44Show/hide
Query:  QICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        + C+ KY+LV+HP+M+AS FGNLDHRTLVQC K+P T FYQIFA++A  VWIL GIA ST  KAE FVVRS+S F DT+ME+VK D
Subjt:  QICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

XP_030506267.1 protein GRAVITROPIC IN THE LIGHT 1 [Cannabis sativa]5.0e-2262.07Show/hide
Query:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        S+ C  KY+LV+HP+M+AS FGNLD+RTLV   K+P TPFYQIFA++A  VW+LQGIA S +PKA  F V   SKFSD YME+V+ D
Subjt:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

TrEMBL top hitse value%identityAlignment
A0A2N9G0L0 DUF641 domain-containing protein8.3e-2362.07Show/hide
Query:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        ++ C  KY+LV+HPM++AS FGNLDHRT V   K+P TPFYQIFA++A  VW+LQGIA S NPKAE F V+  SKFSD +ME+V+ D
Subjt:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

A0A6J1KAR0 protein GRAVITROPIC IN THE LIGHT 17.5e-2468.6Show/hide
Query:  QICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        + C+ KY+LV+HP+M+AS FGNLDHRTLVQC K+P T FYQIFA++A  VWIL GIA S N KAE FVVRS+SKF DT+ME+VK D
Subjt:  QICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

A0A7J6GCA4 DUF641 domain-containing protein2.4e-2262.07Show/hide
Query:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        S+ C  KY+LV+HP+M+AS FGNLD+RTLV   K+P TPFYQIFA++A  VW+LQGIA S +PKA  F V   SKFSD YME+V+ D
Subjt:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

A0A7J6H301 DUF641 domain-containing protein2.4e-2262.07Show/hide
Query:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        S+ C  KY+LV+HP+M+AS FGNLD+RTLV   K+P TPFYQIFA++A  VW+LQGIA S +PKA  F V   SKFSD YME+V+ D
Subjt:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

A0A803PVT2 Uncharacterized protein2.4e-2262.07Show/hide
Query:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        S+ C  KY+LV+HP+M+AS FGNLD+RTLV   K+P TPFYQIFA++A  VW+LQGIA S +PKA  F V   SKFSD YME+V+ D
Subjt:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELAN-VWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53380.1 Plant protein of unknown function (DUF641)3.2e-1135.63Show/hide
Query:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        ++ CR+KY+ +IHP M+ + FG+L  R  V   ++P T  +  F E+A  +W+L  +A S   +AE F V    +FS+ YM++V  +
Subjt:  SQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

AT2G45260.1 Plant protein of unknown function (DUF641)2.7e-1851.19Show/hide
Query:  CRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        CRSKY+L++HP M+AS FGNLD R  V    +P T FYQ F +LA ++WIL  +A S +P A+ F V+  S+FSD+YME+V ++
Subjt:  CRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

AT3G14870.1 Plant protein of unknown function (DUF641)2.9e-1237.5Show/hide
Query:  LSQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        L++ CR+KY+ +IHP M+ + FG+L  R  V   ++P T     F E+A  VW+L  +A S +P+A  F V    +FS+ YM++V  +
Subjt:  LSQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

AT3G14870.2 Plant protein of unknown function (DUF641)2.9e-1237.5Show/hide
Query:  LSQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        L++ CR+KY+ +IHP M+ + FG+L  R  V   ++P T     F E+A  VW+L  +A S +P+A  F V    +FS+ YM++V  +
Subjt:  LSQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD

AT3G14870.3 Plant protein of unknown function (DUF641)2.9e-1237.5Show/hide
Query:  LSQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD
        L++ CR+KY+ +IHP M+ + FG+L  R  V   ++P T     F E+A  VW+L  +A S +P+A  F V    +FS+ YM++V  +
Subjt:  LSQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELA-NVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTCTCAAATCTGTAGAAGCAAATATATTCTAGTCATTCATCCGATGATGAAAGCCTCGTCTTTTGGAAATCTAGATCATAGGACACTCGTGCAGTGTAGCAAGTATCC
AACAACTCCGTTCTACCAAATATTTGCAGAACTGGCAAATGTTTGGATTTTACAAGGGATTGCAACTTCAACAAATCCTAAGGCAGAGCCTTTTGTGGTCAGAAGTGAGA
GCAAATTCTCAGACACTTACATGGAAGCTGTCAAAAGGGAT
mRNA sequenceShow/hide mRNA sequence
CTCTCTCAAATCTGTAGAAGCAAATATATTCTAGTCATTCATCCGATGATGAAAGCCTCGTCTTTTGGAAATCTAGATCATAGGACACTCGTGCAGTGTAGCAAGTATCC
AACAACTCCGTTCTACCAAATATTTGCAGAACTGGCAAATGTTTGGATTTTACAAGGGATTGCAACTTCAACAAATCCTAAGGCAGAGCCTTTTGTGGTCAGAAGTGAGA
GCAAATTCTCAGACACTTACATGGAAGCTGTCAAAAGGGAT
Protein sequenceShow/hide protein sequence
LSQICRSKYILVIHPMMKASSFGNLDHRTLVQCSKYPTTPFYQIFAELANVWILQGIATSTNPKAEPFVVRSESKFSDTYMEAVKRD