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MS007568 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007568
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold401:289702..289917
RNA-Seq ExpressionMS007568
SyntenyMS007568
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3964493.1 hypothetical protein CMV_011221 [Castanea mollissima]2.4e-2290.91Show/hide
Query:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GGPGSSPPRC SKCGNCTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

OWM66639.1 hypothetical protein CDL15_Pgr010290 [Punica granatum]5.4e-2278.26Show/hide
Query:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GM +++  RR L  GGPGSSPPRC SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

PKI54670.1 hypothetical protein CRG98_024955 [Punica granatum]5.4e-2278.26Show/hide
Query:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GM +++  RR L  GGPGSSPPRC SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

XP_022154900.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Momordica charantia]8.8e-3397.06Show/hide
Query:  MQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        +QVA AGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
Subjt:  MQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

XP_031385039.1 uncharacterized protein LOC116198909 [Punica granatum]5.4e-2278.26Show/hide
Query:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GM +++  RR L  GGPGSSPPRC SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

TrEMBL top hitse value%identityAlignment
A0A218W295 Epidermal patterning factor-like protein2.6e-2278.26Show/hide
Query:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GM +++  RR L  GGPGSSPPRC SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

A0A2I0JFJ7 Epidermal patterning factor-like protein2.6e-2278.26Show/hide
Query:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GM +++  RR L  GGPGSSPPRC SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

A0A6A4PWJ8 Epidermal patterning factor-like protein2.6e-2286.21Show/hide
Query:  LGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        LG GGPGS PPRC SKCGNCTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NK YMP
Subjt:  LGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

A0A6J1DKY2 Epidermal patterning factor-like protein4.3e-3397.06Show/hide
Query:  MQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        +QVA AGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
Subjt:  MQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

A0A6P8CS74 Epidermal patterning factor-like protein2.6e-2278.26Show/hide
Query:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GM +++  RR L  GGPGSSPPRC SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 65.0e-2387.04Show/hide
Query:  GPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        G GSSPPRC+SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 42.9e-1870.91Show/hide
Query:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GGPGSSPP C SKCG C PCKPVH  VP+ PG  +  +YYPEAWRCKC NKL+MP
Subjt:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

Q7M1E7 Polygalacturonase6.0e-0850.98Show/hide
Query:  SSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        SSPP C +KC  C PCKP    + V P  P   DYYP+ W C C NK+Y P
Subjt:  SSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

Q9FY19 Polygalacturonase6.0e-0850.98Show/hide
Query:  SSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        SSPP C +KC  C PCKP    + V P  P   DYYP+ W C C NK+Y P
Subjt:  SSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 51.0e-1565.45Show/hide
Query:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GGPGS PP C  KCG C PCK VH  VP+ PG  +  +YYPEAWRCKC NKL+MP
Subjt:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein4.4e-0639.62Show/hide
Query:  GSSPPRCASKCGNCTPCKPVHVAV-PVPPGTPVTADYYPEAWRCKCRNKLYMP
        GS PP CA+KC NC PC P    +         +  YYP  W C+CR++++ P
Subjt:  GSSPPRCASKCGNCTPCKPVHVAV-PVPPGTPVTADYYPEAWRCKCRNKLYMP

AT2G30370.1 allergen-related3.6e-2487.04Show/hide
Query:  GPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        G GSSPPRC+SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

AT2G30370.2 allergen-related3.6e-2487.04Show/hide
Query:  GPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        G GSSPPRC+SKCG CTPCKPVH  VPVPPGTPVTA+YYPEAWRCKC NKLYMP
Subjt:  GPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

AT3G22820.1 allergen-related7.2e-1765.45Show/hide
Query:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GGPGS PP C  KCG C PCK VH  VP+ PG  +  +YYPEAWRCKC NKL+MP
Subjt:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)2.0e-1970.91Show/hide
Query:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP
        GGPGSSPP C SKCG C PCKPVH  VP+ PG  +  +YYPEAWRCKC NKL+MP
Subjt:  GGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTAAATTTGGGATGCAGGTGGCAGCCGCCGGAAGAAGAGGGCTGGGTCAGGGTGGGCCTGGATCGTCGCCGCCGCGGTGCGCGTCAAAGTGCGGGAATTGCACGCCGTG
CAAGCCGGTTCATGTGGCGGTGCCGGTGCCGCCGGGAACTCCGGTGACTGCGGACTACTACCCCGAAGCCTGGAGATGCAAATGCAGGAACAAGCTGTACATGCCC
mRNA sequenceShow/hide mRNA sequence
GTTAAATTTGGGATGCAGGTGGCAGCCGCCGGAAGAAGAGGGCTGGGTCAGGGTGGGCCTGGATCGTCGCCGCCGCGGTGCGCGTCAAAGTGCGGGAATTGCACGCCGTG
CAAGCCGGTTCATGTGGCGGTGCCGGTGCCGCCGGGAACTCCGGTGACTGCGGACTACTACCCCGAAGCCTGGAGATGCAAATGCAGGAACAAGCTGTACATGCCC
Protein sequenceShow/hide protein sequence
VKFGMQVAAAGRRGLGQGGPGSSPPRCASKCGNCTPCKPVHVAVPVPPGTPVTADYYPEAWRCKCRNKLYMP