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MS007569 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007569
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold401:294389..294559
RNA-Seq ExpressionMS007569
SyntenyMS007569
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2951276.1 EPIDERMAL PATTERNING FACTOR 6 [Olea europaea subsp. europaea]1.7e-1570.37Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGSSPP+C +KCG CTPCKLV   V VPP  P+T +YYP+AWRCKC NKLY+P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

KAA3456557.1 EPIDERMAL PATTERNING FACTOR-like protein 5 isoform X3 [Gossypium australe]2.3e-1572.22Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGSSPP+CA+KCG CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

XP_012471725.1 PREDICTED: uncharacterized protein LOC105789061 isoform X1 [Gossypium raimondii]2.3e-1572.22Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGSSPP+CA+KCG CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

XP_015869215.1 EPIDERMAL PATTERNING FACTOR-like protein 6 [Ziziphus jujuba]1.3e-1570Show/hide
Query:  GRR---GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GRR   GPGSSPP+C AKCG+CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  GRR---GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

XP_022154900.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Momordica charantia]2.9e-1873.68Show/hide
Query:  GRRGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        G+ GPGSSPP+CA+KCG CTPCK V   V VPP  P+TADYYP+AWRCKCRNKLY+P
Subjt:  GRRGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

TrEMBL top hitse value%identityAlignment
A0A0B0MS25 Epidermal patterning factor-like protein1.1e-1572.22Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGSSPP+CA+KCG CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

A0A6J1DKY2 Epidermal patterning factor-like protein1.4e-1873.68Show/hide
Query:  GRRGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        G+ GPGSSPP+CA+KCG CTPCK V   V VPP  P+TADYYP+AWRCKCRNKLY+P
Subjt:  GRRGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

A0A6P3Z507 Epidermal patterning factor-like protein6.4e-1670Show/hide
Query:  GRR---GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GRR   GPGSSPP+C AKCG+CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  GRR---GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

A0A6P4P9M3 Epidermal patterning factor-like protein1.1e-1572.22Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGSSPP+CA+KCG CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

A0A6P4PTG5 Epidermal patterning factor-like protein1.1e-1572.22Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGSSPP+CA+KCG CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 62.5e-1769.09Show/hide
Query:  RGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        RG GSSPP+C++KCG CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  RGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 42.2e-1359.26Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGSSPP C +KCG C PCK V   V + P   M  +YYP+AWRCKC NKL++P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

Q7M1E7 Polygalacturonase1.1e-0752.94Show/hide
Query:  SSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        SSPP C  KC  C PCK  L  + V P  P   DYYPQ W C C NK+Y P
Subjt:  SSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

Q9FY19 Polygalacturonase1.4e-0752.94Show/hide
Query:  SSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        SSPP C  KC  C PCK  L  + V P  P   DYYPQ W C C NK+Y P
Subjt:  SSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 51.4e-1257.41Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGS PP C  KCG C PCK V   V + P   M  +YYP+AWRCKC NKL++P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein7.8e-0639.62Show/hide
Query:  GSSPPQCAAKCGTCTPCKLVLARVR-VPPRAPMTADYYPQAWRCKCRNKLYIP
        GS PP CA KC  C PC   L  +R        +  YYP  W C+CR++++ P
Subjt:  GSSPPQCAAKCGTCTPCKLVLARVR-VPPRAPMTADYYPQAWRCKCRNKLYIP

AT2G30370.1 allergen-related1.8e-1869.09Show/hide
Query:  RGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        RG GSSPP+C++KCG CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  RGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

AT2G30370.2 allergen-related1.8e-1869.09Show/hide
Query:  RGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        RG GSSPP+C++KCG CTPCK V   V VPP  P+TA+YYP+AWRCKC NKLY+P
Subjt:  RGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

AT3G22820.1 allergen-related1.0e-1357.41Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGS PP C  KCG C PCK V   V + P   M  +YYP+AWRCKC NKL++P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.6e-1459.26Show/hide
Query:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP
        GPGSSPP C +KCG C PCK V   V + P   M  +YYP+AWRCKC NKL++P
Subjt:  GPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAGAAGAGGGCCTGGATCGTCACCGCCTCAGTGCGCCGCAAAGTGCGGGACCTGCACGCCGTGCAAGCTGGTTCTTGCGCGGGTGCGGGTGCCGCCGAGAGCTCCGAT
GACGGCGGACTACTATCCCCAAGCCTGGAGATGCAAATGCAGGAACAAGCTGTACATACCC
mRNA sequenceShow/hide mRNA sequence
GGAAGAAGAGGGCCTGGATCGTCACCGCCTCAGTGCGCCGCAAAGTGCGGGACCTGCACGCCGTGCAAGCTGGTTCTTGCGCGGGTGCGGGTGCCGCCGAGAGCTCCGAT
GACGGCGGACTACTATCCCCAAGCCTGGAGATGCAAATGCAGGAACAAGCTGTACATACCC
Protein sequenceShow/hide protein sequence
GRRGPGSSPPQCAAKCGTCTPCKLVLARVRVPPRAPMTADYYPQAWRCKCRNKLYIP