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MS007580 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007580
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 25-like
Genome locationscaffold836:5365..5610
RNA-Seq ExpressionMS007580
SyntenyMS007580
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
InterPro domainsIPR039316 - CLAVATA3/ESR (CLE)-related protein 25/26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146759.1 uncharacterized protein LOC101209880 [Cucumis sativus]5.4e-1048.39Show/hide
Query:  MTSYPTHKATFGFLAILWFIWLLLVAAASH-----ATGVPPVELAAESSAIFRET--AAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR
        MT Y      FG L ++ FIWLLL   +         G        E S I +ET  A GGG+    + HP+WHLNYMSKRRVPNGPDPIHNR
Subjt:  MTSYPTHKATFGFLAILWFIWLLLVAAASH-----ATGVPPVELAAESSAIFRET--AAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR

XP_008464794.1 PREDICTED: uncharacterized protein LOC103502597 [Cucumis melo]4.9e-1151.25Show/hide
Query:  FGFLAILWFIWLLLVAAASH-----ATGVPPVELAAESSAIFRET--AAGGGKLV-HPQWHLNYMSKRRVPNGPDPIHNR
        FG L ++ FIWLLL   +         G     +  E S +F++T    GGGK+  HP+WHLNYMSKRRVPNGPDPIHNR
Subjt:  FGFLAILWFIWLLLVAAASH-----ATGVPPVELAAESSAIFRET--AAGGGKLV-HPQWHLNYMSKRRVPNGPDPIHNR

XP_022158662.1 CLAVATA3/ESR (CLE)-related protein 25-like [Momordica charantia]2.3e-3795.29Show/hide
Query:  MTSYPTHKATFGFLAILWFIWLLLVAAASHATGVPPVELAAESSAIFRETAAG---GGKLVHPQWHLNYMSKRRVPNGPDPIHNR
        MTSYPTHKATFG LAILWFIWLLLVAAASHATGVPPVELAAESSAIFRETAAG   GGKLVHPQWHLNYMSKRRVPNGPDPIHNR
Subjt:  MTSYPTHKATFGFLAILWFIWLLLVAAASHATGVPPVELAAESSAIFRETAAG---GGKLVHPQWHLNYMSKRRVPNGPDPIHNR

XP_022946527.1 uncharacterized protein LOC111450563 [Cucurbita moschata]1.1e-1050Show/hide
Query:  MTSY-PTHKATFGFLAILWFIWLLLVAAA-----SHATGVPPVELAAESSAIFRETAAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR
        M+SY P+ KA    +A++ FIWLLLV  +     S ATG+     AA+   I +E    GG+    +V  +WHLNYMSKRRVPNGPDPIHNR
Subjt:  MTSY-PTHKATFGFLAILWFIWLLLVAAA-----SHATGVPPVELAAESSAIFRETAAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR

XP_023521565.1 uncharacterized protein LOC111785387 [Cucurbita pepo subsp. pepo]6.3e-1150Show/hide
Query:  MTSY-PTHKATFGFLAILWFIWLLLVAAA-----SHATGVPPVELAAESSAIFRETAAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR
        M+SY P+ KA    +A++ FIWLLLV  +     S ATG+  +  AA+   I +E    GG+    +V  +WHLNYMSKRRVPNGPDPIHNR
Subjt:  MTSY-PTHKATFGFLAILWFIWLLLVAAA-----SHATGVPPVELAAESSAIFRETAAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR

TrEMBL top hitse value%identityAlignment
A0A1S3CMA2 uncharacterized protein LOC1035025972.4e-1151.25Show/hide
Query:  FGFLAILWFIWLLLVAAASH-----ATGVPPVELAAESSAIFRET--AAGGGKLV-HPQWHLNYMSKRRVPNGPDPIHNR
        FG L ++ FIWLLL   +         G     +  E S +F++T    GGGK+  HP+WHLNYMSKRRVPNGPDPIHNR
Subjt:  FGFLAILWFIWLLLVAAASH-----ATGVPPVELAAESSAIFRET--AAGGGKLV-HPQWHLNYMSKRRVPNGPDPIHNR

A0A5A7TRB3 Clavata3/esr-related 26, putative isoform 12.4e-1151.25Show/hide
Query:  FGFLAILWFIWLLLVAAASH-----ATGVPPVELAAESSAIFRET--AAGGGKLV-HPQWHLNYMSKRRVPNGPDPIHNR
        FG L ++ FIWLLL   +         G     +  E S +F++T    GGGK+  HP+WHLNYMSKRRVPNGPDPIHNR
Subjt:  FGFLAILWFIWLLLVAAASH-----ATGVPPVELAAESSAIFRET--AAGGGKLV-HPQWHLNYMSKRRVPNGPDPIHNR

A0A6J1DXT1 CLAVATA3/ESR (CLE)-related protein 25-like1.1e-3795.29Show/hide
Query:  MTSYPTHKATFGFLAILWFIWLLLVAAASHATGVPPVELAAESSAIFRETAAG---GGKLVHPQWHLNYMSKRRVPNGPDPIHNR
        MTSYPTHKATFG LAILWFIWLLLVAAASHATGVPPVELAAESSAIFRETAAG   GGKLVHPQWHLNYMSKRRVPNGPDPIHNR
Subjt:  MTSYPTHKATFGFLAILWFIWLLLVAAASHATGVPPVELAAESSAIFRETAAG---GGKLVHPQWHLNYMSKRRVPNGPDPIHNR

A0A6J1G3Y8 uncharacterized protein LOC1114505635.2e-1150Show/hide
Query:  MTSY-PTHKATFGFLAILWFIWLLLVAAA-----SHATGVPPVELAAESSAIFRETAAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR
        M+SY P+ KA    +A++ FIWLLLV  +     S ATG+     AA+   I +E    GG+    +V  +WHLNYMSKRRVPNGPDPIHNR
Subjt:  MTSY-PTHKATFGFLAILWFIWLLLVAAA-----SHATGVPPVELAAESSAIFRETAAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR

A0A6J1KBR7 uncharacterized protein LOC1114940282.6e-1048.91Show/hide
Query:  MTSY-PTHKATFGFLAILWFIWLLLVAAA-----SHATGVPPVELAAESSAIFRETAAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR
        M+SY P+ KA    +A++ FIWLLLV  +     S ATG+     AA+   I +E    GG+    +V  +WHLNY+SKRRVPNGPDPIHNR
Subjt:  MTSY-PTHKATFGFLAILWFIWLLLVAAA-----SHATGVPPVELAAESSAIFRETAAGGGK----LVHPQWHLNYMSKRRVPNGPDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCTTATCCTACTCATAAAGCCACCTTTGGCTTTCTTGCAATTCTCTGGTTTATCTGGCTTCTCTTGGTGGCTGCAGCCTCTCATGCCACCGGAGTACCGCCGGT
CGAGTTAGCAGCTGAATCAAGTGCAATTTTCAGAGAGACGGCGGCCGGTGGCGGCAAGCTTGTTCATCCGCAGTGGCATCTGAACTACATGAGCAAAAGAAGAGTTCCCA
ATGGCCCAGATCCTATTCATAACAGG
mRNA sequenceShow/hide mRNA sequence
ATGACTTCTTATCCTACTCATAAAGCCACCTTTGGCTTTCTTGCAATTCTCTGGTTTATCTGGCTTCTCTTGGTGGCTGCAGCCTCTCATGCCACCGGAGTACCGCCGGT
CGAGTTAGCAGCTGAATCAAGTGCAATTTTCAGAGAGACGGCGGCCGGTGGCGGCAAGCTTGTTCATCCGCAGTGGCATCTGAACTACATGAGCAAAAGAAGAGTTCCCA
ATGGCCCAGATCCTATTCATAACAGG
Protein sequenceShow/hide protein sequence
MTSYPTHKATFGFLAILWFIWLLLVAAASHATGVPPVELAAESSAIFRETAAGGGKLVHPQWHLNYMSKRRVPNGPDPIHNR