; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007581 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007581
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPatatin
Genome locationscaffold836:37225..37698
RNA-Seq ExpressionMS007581
SyntenyMS007581
Gene Ontology termsGO:0006629 - lipid metabolic process (biological process)
GO:0004620 - phospholipase activity (molecular function)
GO:0047372 - acylglycerol lipase activity (molecular function)
InterPro domainsIPR002641 - Patatin-like phospholipase domain
IPR016035 - Acyl transferase/acyl hydrolase/lysophospholipase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585648.1 Patatin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2655.74Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS-IQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLT
        QKLDG+ AR+ADYF+V+ GTS G L+ AML TPNE+NRPL+    +++FYL+HC KIF Q+R R    I+ L  PKYN  YLH L+++ L DTKL QTLT
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS-IQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLT

Query:  NVVMLDIDIKPRYPIVFCSSEV
        NVV+   DIK   P +F S E+
Subjt:  NVVMLDIDIKPRYPIVFCSSEV

KAG7020559.1 Patatin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2655.74Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS-IQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLT
        QKLDG  AR+ADYF+V+ GTS G L+ AML TPNE+NRPL+    +++FYL+HC KIF Q+R R    I+ L  PKYN  YLH L+++ L DTKL QTLT
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS-IQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLT

Query:  NVVMLDIDIKPRYPIVFCSSEV
        NVV+   DIK   P +F S E+
Subjt:  NVVMLDIDIKPRYPIVFCSSEV

XP_021284254.1 patatin-like protein 2 [Herrania umbratica]1.6e-2653.54Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT---PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS----IQRLVFPKYNDAYLHNLIRDNLDDTKL
        QKLDG  ARLADYF+V++GTS G L+ AMLT   PNE NRPL+    + +FYLEHC KIF Q+R         ++ L+ PKYN  YLHN++R+ L +T+L
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT---PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS----IQRLVFPKYNDAYLHNLIRDNLDDTKL

Query:  NQTLTNVVMLDIDIKPRYPIVFCSSEV
        +QTLTNVV+   DIK   P +F S EV
Subjt:  NQTLTNVVMLDIDIKPRYPIVFCSSEV

XP_022951150.1 patatin-like protein 2 [Cucurbita moschata]2.1e-2655.74Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS-IQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLT
        QKLDG  AR+ADYF+V+ GTS G L+ AML TPNE+NRPL+    +++FYL+HC KIF Q+R R    I+ L  PKYN  YLH L+++ L DTKL QTLT
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS-IQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLT

Query:  NVVMLDIDIKPRYPIVFCSSEV
        NVV+   DIK   P +F S E+
Subjt:  NVVMLDIDIKPRYPIVFCSSEV

XP_023002856.1 patatin-like protein 2 isoform X2 [Cucurbita maxima]5.4e-2755.74Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR-LVFPKYNDAYLHNLIRDNLDDTKLNQTLT
        QKLDG+ AR+ADYF+V+ GTS G L+ AML TPNE+NRPL+    +++FYL+HC KIF Q+R R  +I + L  PKYN  YLH L+++ L DTKL QTLT
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR-LVFPKYNDAYLHNLIRDNLDDTKLNQTLT

Query:  NVVMLDIDIKPRYPIVFCSSEV
        NVV+   DIK   P +F S E+
Subjt:  NVVMLDIDIKPRYPIVFCSSEV

TrEMBL top hitse value%identityAlignment
A0A445GBI1 Patatin3.8e-2651.94Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSI--------QRLVFPKYNDAYLHNLIRDNLDDT
        QKLDG H RLADYF+V+ GTS G L+ A+LT PNE+NRPLY    ++ FYL+H  KIF Q   +CW++        + L  P+YN  YLHNLIR+ L +T
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSI--------QRLVFPKYNDAYLHNLIRDNLDDT

Query:  KLNQTLTNVVMLDIDIKPRYPIVFCSSEV
        KL+QTLTNVV+   DIK   P +F S ++
Subjt:  KLNQTLTNVVMLDIDIKPRYPIVFCSSEV

A0A6J1AC60 Patatin7.6e-2753.54Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT---PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS----IQRLVFPKYNDAYLHNLIRDNLDDTKL
        QKLDG  ARLADYF+V++GTS G L+ AMLT   PNE NRPL+    + +FYLEHC KIF Q+R         ++ L+ PKYN  YLHN++R+ L +T+L
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT---PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS----IQRLVFPKYNDAYLHNLIRDNLDDTKL

Query:  NQTLTNVVMLDIDIKPRYPIVFCSSEV
        +QTLTNVV+   DIK   P +F S EV
Subjt:  NQTLTNVVMLDIDIKPRYPIVFCSSEV

A0A6J1GHW0 Patatin1.0e-2655.74Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS-IQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLT
        QKLDG  AR+ADYF+V+ GTS G L+ AML TPNE+NRPL+    +++FYL+HC KIF Q+R R    I+ L  PKYN  YLH L+++ L DTKL QTLT
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWS-IQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLT

Query:  NVVMLDIDIKPRYPIVFCSSEV
        NVV+   DIK   P +F S E+
Subjt:  NVVMLDIDIKPRYPIVFCSSEV

A0A6J1KMH4 Patatin2.6e-2755.74Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR-LVFPKYNDAYLHNLIRDNLDDTKLNQTLT
        QKLDG+ AR+ADYF+V+ GTS G L+ AML TPNE+NRPL+    +++FYL+HC KIF Q+R R  +I + L  PKYN  YLH L+++ L DTKL QTLT
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAML-TPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR-LVFPKYNDAYLHNLIRDNLDDTKLNQTLT

Query:  NVVMLDIDIKPRYPIVFCSSEV
        NVV+   DIK   P +F S E+
Subjt:  NVVMLDIDIKPRYPIVFCSSEV

I1MXQ8 Patatin3.8e-2651.94Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSI--------QRLVFPKYNDAYLHNLIRDNLDDT
        QKLDG H RLADYF+V+ GTS G L+ A+LT PNE+NRPLY    ++ FYL+H  KIF Q   +CW++        + L  P+YN  YLHNLIR+ L +T
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSI--------QRLVFPKYNDAYLHNLIRDNLDDT

Query:  KLNQTLTNVVMLDIDIKPRYPIVFCSSEV
        KL+QTLTNVV+   DIK   P +F S ++
Subjt:  KLNQTLTNVVMLDIDIKPRYPIVFCSSEV

SwissProt top hitse value%identityAlignment
A2YW91 Patatin-like protein 29.0e-2548.44Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLV-------FPKYNDAYLHNLIRDNLDDTK
        QKLDG  AR+ADYF+VV GTS G LL AMLT PNE+NRPL+   +L KFY+EH   IF Q+    W + ++         PKY+  YLH+L+R+ L DT+
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLV-------FPKYNDAYLHNLIRDNLDDTK

Query:  LNQTLTNVVMLDIDIKPRYPIVFCSSEV
        L++ LTNVV+   DI    P +F   E+
Subjt:  LNQTLTNVVMLDIDIKPRYPIVFCSSEV

O23179 Patatin-like protein 13.5e-2146.4Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR----LVFPKYNDAYLHNLIRDNLDDTKLNQ
        Q+LDG+ ARLADYF+V+ GTS G L+ AMLT P+E  RP +    +  FYLEHC KIF Q       + +    L  PKY+  YL NL+   L +T+L+Q
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR----LVFPKYNDAYLHNLIRDNLDDTKLNQ

Query:  TLTNVVMLDIDIKPRYPIVFCSSEV
        TLTN+V+   DIK   P +F S ++
Subjt:  TLTNVVMLDIDIKPRYPIVFCSSEV

O23181 Patatin-like protein 31.2e-2148.09Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLTPNEH--------NRPLYFVGKLQKFYLEHCRKIFHQER---CRCW--SIQRLV-FPKYNDAYLHNLIRD
        Q+LDG+ ARL DYF+V++GTS G L+ AMLT  +         NRPL+   ++  FYL+H  KIF Q R   C  W  +I RLV  PK+N  YLH+L+  
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLTPNEH--------NRPLYFVGKLQKFYLEHCRKIFHQER---CRCW--SIQRLV-FPKYNDAYLHNLIRD

Query:  NLDDTKLNQTLTNVVMLDIDIKPRYPIVFCS
         L DTKL Q+LTNVV+   DIK   P++F S
Subjt:  NLDDTKLNQTLTNVVMLDIDIKPRYPIVFCS

O48723 Patatin-like protein 21.6e-2652.8Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLV----FPKYNDAYLHNLIRDNLDDTKLNQ
        QKLDG+ ARLADYF+V+ GTS G L+ AMLT PN+  RPL+   +++ FYLE C KIF Q+     + ++LV     PKY+  YLH LI   L DTKL+Q
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLV----FPKYNDAYLHNLIRDNLDDTKLNQ

Query:  TLTNVVMLDIDIKPRYPIVFCSSEV
        TLTNVV+   DIK   P +F S EV
Subjt:  TLTNVVMLDIDIKPRYPIVFCSSEV

Q6ZJD3 Patatin-like protein 29.0e-2548.44Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLV-------FPKYNDAYLHNLIRDNLDDTK
        QKLDG  AR+ADYF+VV GTS G LL AMLT PNE+NRPL+   +L KFY+EH   IF Q+    W + ++         PKY+  YLH+L+R+ L DT+
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLV-------FPKYNDAYLHNLIRDNLDDTK

Query:  LNQTLTNVVMLDIDIKPRYPIVFCSSEV
        L++ LTNVV+   DI    P +F   E+
Subjt:  LNQTLTNVVMLDIDIKPRYPIVFCSSEV

Arabidopsis top hitse value%identityAlignment
AT2G26560.1 phospholipase A 2A1.2e-2752.8Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLV----FPKYNDAYLHNLIRDNLDDTKLNQ
        QKLDG+ ARLADYF+V+ GTS G L+ AMLT PN+  RPL+   +++ FYLE C KIF Q+     + ++LV     PKY+  YLH LI   L DTKL+Q
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLV----FPKYNDAYLHNLIRDNLDDTKLNQ

Query:  TLTNVVMLDIDIKPRYPIVFCSSEV
        TLTNVV+   DIK   P +F S EV
Subjt:  TLTNVVMLDIDIKPRYPIVFCSSEV

AT4G37050.1 PATATIN-like protein 48.6e-2348.09Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLTPNEH--------NRPLYFVGKLQKFYLEHCRKIFHQER---CRCW--SIQRLV-FPKYNDAYLHNLIRD
        Q+LDG+ ARL DYF+V++GTS G L+ AMLT  +         NRPL+   ++  FYL+H  KIF Q R   C  W  +I RLV  PK+N  YLH+L+  
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLTPNEH--------NRPLYFVGKLQKFYLEHCRKIFHQER---CRCW--SIQRLV-FPKYNDAYLHNLIRD

Query:  NLDDTKLNQTLTNVVMLDIDIKPRYPIVFCS
         L DTKL Q+LTNVV+   DIK   P++F S
Subjt:  NLDDTKLNQTLTNVVMLDIDIKPRYPIVFCS

AT4G37070.1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein2.5e-2246.4Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR----LVFPKYNDAYLHNLIRDNLDDTKLNQ
        Q+LDG+ ARLADYF+V+ GTS G L+ AMLT P+E  RP +    +  FYLEHC KIF Q       + +    L  PKY+  YL NL+   L +T+L+Q
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR----LVFPKYNDAYLHNLIRDNLDDTKLNQ

Query:  TLTNVVMLDIDIKPRYPIVFCSSEV
        TLTN+V+   DIK   P +F S ++
Subjt:  TLTNVVMLDIDIKPRYPIVFCSSEV

AT4G37070.2 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein2.5e-2246.4Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR----LVFPKYNDAYLHNLIRDNLDDTKLNQ
        Q+LDG+ ARLADYF+V+ GTS G L+ AMLT P+E  RP +    +  FYLEHC KIF Q       + +    L  PKY+  YL NL+   L +T+L+Q
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR----LVFPKYNDAYLHNLIRDNLDDTKLNQ

Query:  TLTNVVMLDIDIKPRYPIVFCSSEV
        TLTN+V+   DIK   P +F S ++
Subjt:  TLTNVVMLDIDIKPRYPIVFCSSEV

AT4G37070.3 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein2.5e-2246.4Show/hide
Query:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR----LVFPKYNDAYLHNLIRDNLDDTKLNQ
        Q+LDG+ ARLADYF+V+ GTS G L+ AMLT P+E  RP +    +  FYLEHC KIF Q       + +    L  PKY+  YL NL+   L +T+L+Q
Subjt:  QKLDGKHARLADYFNVVNGTSMGSLLAAMLT-PNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQR----LVFPKYNDAYLHNLIRDNLDDTKLNQ

Query:  TLTNVVMLDIDIKPRYPIVFCSSEV
        TLTN+V+   DIK   P +F S ++
Subjt:  TLTNVVMLDIDIKPRYPIVFCSSEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGAAACTAGACGGGAAACACGCTAGATTAGCTGACTACTTTAATGTAGTCAATGGAACTAGTATGGGCAGTTTATTGGCTGCTATGTTAACACCTAATGAACATAATCG
ACCTTTGTACTTTGTCGGCAAGTTACAAAAGTTTTACTTAGAACATTGCCGAAAAATATTTCATCAAGAAAGATGCCGGTGCTGGTCGATTCAAAGATTAGTGTTTCCCA
AGTATAACGATGCGTATCTTCACAACCTTATCCGAGACAATCTCGATGATACTAAATTAAACCAAACTCTTACGAATGTTGTAATGCTTGACATTGACATCAAGCCTAGA
TATCCAATTGTATTTTGTAGTTCAGAGGTT
mRNA sequenceShow/hide mRNA sequence
CAGAAACTAGACGGGAAACACGCTAGATTAGCTGACTACTTTAATGTAGTCAATGGAACTAGTATGGGCAGTTTATTGGCTGCTATGTTAACACCTAATGAACATAATCG
ACCTTTGTACTTTGTCGGCAAGTTACAAAAGTTTTACTTAGAACATTGCCGAAAAATATTTCATCAAGAAAGATGCCGGTGCTGGTCGATTCAAAGATTAGTGTTTCCCA
AGTATAACGATGCGTATCTTCACAACCTTATCCGAGACAATCTCGATGATACTAAATTAAACCAAACTCTTACGAATGTTGTAATGCTTGACATTGACATCAAGCCTAGA
TATCCAATTGTATTTTGTAGTTCAGAGGTT
Protein sequenceShow/hide protein sequence
QKLDGKHARLADYFNVVNGTSMGSLLAAMLTPNEHNRPLYFVGKLQKFYLEHCRKIFHQERCRCWSIQRLVFPKYNDAYLHNLIRDNLDDTKLNQTLTNVVMLDIDIKPR
YPIVFCSSEV