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MS007594 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007594
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGATA transcription factor
Genome locationscaffold836:271565..271781
RNA-Seq ExpressionMS007594
SyntenyMS007594
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577242.1 GATA transcription factor 5, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1566.22Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS  FPSA IS+L+KS ++  AVD K     + SP + CFKT  PVKARSKRTRT GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
KAG7015332.1 GATA transcription factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1566.22Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS  FPSA IS+L+KS ++  AVD K     + SP + CFKT  PVKARSKRTRT GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
XP_022929334.1 GATA transcription factor 5-like [Cucurbita moschata]1.3e-1566.22Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS  FPSA IS+L+KS ++  AVD K     + SP + CFKT  PVKARSKRTRT GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
XP_022985049.1 GATA transcription factor 5-like [Cucurbita maxima]6.3e-1564.86Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKL---ETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS  FPSA IS+L+KS ++  AVD +     + SP + CFKT  PVKARSKRTRT GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKL---ETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
XP_038876782.1 GATA transcription factor 5-like [Benincasa hispida]1.0e-1766.22Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLETH---SPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS PFPS  +S+L+KS +E   V+ +LET    SP +PCFKT  PVKARSKRTR  GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLETH---SPLQPCFKTLSPVKARSKRTRTDGRVWCL
TrEMBL top hitse value%identityAlignment
A0A0A0KUP5 GATA transcription factor1.4e-1257.33Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKL----ETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS PFPS      +KS +E+   + +L     + SP +PCFKT  P KARSKR RT GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKL----ETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
A0A1S3CPB9 GATA transcription factor1.2e-1462.16Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS PFPS     L+KS +E+  ++ +LE   + SP +PCFKT  PVKARSKR RT GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
A0A2P6RM06 Putative transcription factor C2C2-GATA family2.5e-0953.52Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GF+T  P+  ++   K+  E      K      L+PCFKT  P KARSKRTRT GRVW L
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
A0A6J1ENF7 GATA transcription factor6.1e-1666.22Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS  FPSA IS+L+KS ++  AVD K     + SP + CFKT  PVKARSKRTRT GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLE---THSPLQPCFKTLSPVKARSKRTRTDGRVWCL
A0A6J1JC71 GATA transcription factor3.0e-1564.86Show/hide
Query:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKL---ETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF GFS  FPSA IS+L+KS ++  AVD +     + SP + CFKT  PVKARSKRTRT GRVWCL
Subjt:  WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKL---ETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
SwissProt top hitse value%identityAlignment
Q9FH57 GATA transcription factor 52.3e-0443.24Show/hide
Query:  WLSHFVEDSFFGFSTP---FPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF  +S P       E  A L    +     V  ET      CFK+  P KARSKR R   +VW L
Subjt:  WLSHFVEDSFFGFSTP---FPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
Arabidopsis top hitse value%identityAlignment
AT5G66320.1 GATA transcription factor 51.7e-0543.24Show/hide
Query:  WLSHFVEDSFFGFSTP---FPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF  +S P       E  A L    +     V  ET      CFK+  P KARSKR R   +VW L
Subjt:  WLSHFVEDSFFGFSTP---FPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
AT5G66320.2 GATA transcription factor 51.7e-0543.24Show/hide
Query:  WLSHFVEDSFFGFSTP---FPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL
        WLSHFVEDSF  +S P       E  A L    +     V  ET      CFK+  P KARSKR R   +VW L
Subjt:  WLSHFVEDSFFGFSTP---FPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCTTTCTCATTTCGTTGAAGATTCTTTCTTCGGATTCTCCACCCCATTCCCCTCTGCCGAAATTTCTGCGCTCTTGAAATCGTTTGAGGAGGTCGTTGCTGTCGACGT
GAAACTGGAAACCCACAGTCCCCTTCAACCTTGTTTCAAAACCCTCAGTCCAGTCAAGGCTCGAAGCAAGCGGACAAGAACTGACGGTCGAGTTTGGTGCCTT
mRNA sequenceShow/hide mRNA sequence
TGGCTTTCTCATTTCGTTGAAGATTCTTTCTTCGGATTCTCCACCCCATTCCCCTCTGCCGAAATTTCTGCGCTCTTGAAATCGTTTGAGGAGGTCGTTGCTGTCGACGT
GAAACTGGAAACCCACAGTCCCCTTCAACCTTGTTTCAAAACCCTCAGTCCAGTCAAGGCTCGAAGCAAGCGGACAAGAACTGACGGTCGAGTTTGGTGCCTT
Protein sequenceShow/hide protein sequence
WLSHFVEDSFFGFSTPFPSAEISALLKSFEEVVAVDVKLETHSPLQPCFKTLSPVKARSKRTRTDGRVWCL