; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007599 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007599
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionincreased DNA methylation 3
Genome locationscaffold836:326698..327219
RNA-Seq ExpressionMS007599
SyntenyMS007599
Gene Ontology termsGO:1901537 - positive regulation of DNA demethylation (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR039321 - Increased DNA methylation 2/3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144249.1 increased DNA methylation 3 [Cucumis sativus]4.1e-6090.98Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEG+ D T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKD+SKVK EIK DGKVQIEGVM+ P  LKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSP+FRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

XP_008464812.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo]4.1e-6090.98Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEG+ D T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKD+SKVK EIK DGKVQIEGVM+ P  LKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSP+FRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

XP_022155877.1 increased DNA methylation 3 [Momordica charantia]4.1e-68100Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

XP_023002579.1 increased DNA methylation 3-like [Cucurbita maxima]1.6e-5989.47Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEGH D+ KLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKD+SKVK EIK DG+V IEGVMT P +LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSP+FRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

XP_038884247.1 increased DNA methylation 3 [Benincasa hispida]1.8e-6091.73Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEGH D T  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKD+SKVK EIK DGKVQIEGVMT P VLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLS P+FRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

TrEMBL top hitse value%identityAlignment
A0A0A0KDF2 SHSP domain-containing protein2.0e-6090.98Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEG+ D T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKD+SKVK EIK DGKVQIEGVM+ P  LKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSP+FRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

A0A1S3CMV5 increased DNA methylation 3 isoform X22.0e-6090.98Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEG+ D T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKD+SKVK EIK DGKVQIEGVM+ P  LKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSP+FRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

A0A5D3CM92 Increased DNA methylation 3 isoform X22.0e-6090.98Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEG+ D T LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKD+SKVK EIK DGKVQIEGVM+ P  LKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSP+FRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

A0A6J1DRM0 increased DNA methylation 32.0e-68100Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

A0A6J1KJX1 increased DNA methylation 3-like7.6e-6089.47Show/hide
Query:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT
        MEGH D+ KLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKD+SKVK EIK DG+V IEGVMT P +LK+SSAMYQMKVQQLCPPG FT
Subjt:  MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFT

Query:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA
        VSFKLPGPVDPRLSSP+FRPDGILEVVVMKSRA
Subjt:  VSFKLPGPVDPRLSSPTFRPDGILEVVVMKSRA

SwissProt top hitse value%identityAlignment
Q84K79 Alpha-crystallin domain-containing protein 22.34.9e-2446.77Show/hide
Query:  TKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTS-PSVLKESSAMYQMKVQQLCPPGPFTVSFKLP
        ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D+ +  CEI+ DGK+ I+G  T+    + + + +++M  Q LCPPG FT++F+LP
Subjt:  TKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTS-PSVLKESSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPTFRPDGILEVVVMK
        GPV     +  F  DG+LE VV K
Subjt:  GPVDPRLSSPTFRPDGILEVVVMK

Q8RWL4 Increased DNA methylation 21.9e-2345.38Show/hide
Query:  GHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSV-LKESSAMYQMKVQQLCPPGPFTV
        G   +   KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D+    CE++ +GKV + GV T+    +K  S +++M+ + LCPPG F+V
Subjt:  GHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSV-LKESSAMYQMKVQQLCPPGPFTV

Query:  SFKLPGPVDPRLSSPTFRPDGILEVVVMKS
        SF+LPGPV P   S  F  DGILE VVMK+
Subjt:  SFKLPGPVDPRLSSPTFRPDGILEVVVMKS

Q9SYQ0 Increased DNA methylation 31.9e-3152.85Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMT-SPSVLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +  CEI+ DGKV +EG  T     +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMT-SPSVLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPTFRPDGILEVVVMKSR
        DPRL SP FR DGI E V+++ +
Subjt:  DPRLSSPTFRPDGILEVVVMKSR

Arabidopsis top hitse value%identityAlignment
AT1G20870.1 HSP20-like chaperones superfamily protein1.3e-3252.85Show/hide
Query:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMT-SPSVLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV
        +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +  CEI+ DGKV +EG  T     +K  S +++M +++LCPPGPF + F LPGPV
Subjt:  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMT-SPSVLKESSAMYQMKVQQLCPPGPFTVSFKLPGPV

Query:  DPRLSSPTFRPDGILEVVVMKSR
        DPRL SP FR DGI E V+++ +
Subjt:  DPRLSSPTFRPDGILEVVVMKSR

AT1G54850.1 HSP20-like chaperones superfamily protein3.5e-2546.77Show/hide
Query:  TKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTS-PSVLKESSAMYQMKVQQLCPPGPFTVSFKLP
        ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D+ +  CEI+ DGK+ I+G  T+    + + + +++M  Q LCPPG FT++F+LP
Subjt:  TKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTS-PSVLKESSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPTFRPDGILEVVVMK
        GPV     +  F  DG+LE VV K
Subjt:  GPVDPRLSSPTFRPDGILEVVVMK

AT1G76440.1 HSP20-like chaperones superfamily protein1.5e-3960.48Show/hide
Query:  NTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFTVSFKLP
        ++K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K+Q K+KCEI+ +G+V I+GV+   ++  ++  +Y+M+VQQLCPPGPF+++F LP
Subjt:  NTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPTFRPDGILEVVVMK
        G VDPRL SP FR DGI EVVV+K
Subjt:  GPVDPRLSSPTFRPDGILEVVVMK

AT1G76440.2 HSP20-like chaperones superfamily protein1.5e-3960.48Show/hide
Query:  NTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFTVSFKLP
        ++K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K+Q K+KCEI+ +G+V I+GV+   ++  ++  +Y+M+VQQLCPPGPF+++F LP
Subjt:  NTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPTFRPDGILEVVVMK
        G VDPRL SP FR DGI EVVV+K
Subjt:  GPVDPRLSSPTFRPDGILEVVVMK

AT1G76440.3 HSP20-like chaperones superfamily protein1.5e-3960.48Show/hide
Query:  NTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFTVSFKLP
        ++K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K+Q K+KCEI+ +G+V I+GV+   ++  ++  +Y+M+VQQLCPPGPF+++F LP
Subjt:  NTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFTVSFKLP

Query:  GPVDPRLSSPTFRPDGILEVVVMK
        G VDPRL SP FR DGI EVVV+K
Subjt:  GPVDPRLSSPTFRPDGILEVVVMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCCATGCTGATAATACGAAGCTGAAGCCATCTGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCGATCGGTCTTGTTGATATTGGCGTGAG
CGAAGGTGCATACCTTTTCCGCGTTGCACTCCCTGGTGTACGAAAGGATCAAAGTAAAGTTAAATGTGAGATCAAGTGCGATGGTAAGGTTCAGATTGAAGGAGTGATGA
CAAGTCCAAGCGTTTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTTTGCCCTCCGGGACCTTTTACGGTTTCTTTTAAGCTTCCGGGACCGGTTGAT
CCGCGATTGTCTTCTCCTACTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCCATGCTGATAATACGAAGCTGAAGCCATCTGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCGATCGGTCTTGTTGATATTGGCGTGAG
CGAAGGTGCATACCTTTTCCGCGTTGCACTCCCTGGTGTACGAAAGGATCAAAGTAAAGTTAAATGTGAGATCAAGTGCGATGGTAAGGTTCAGATTGAAGGAGTGATGA
CAAGTCCAAGCGTTTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTTTGCCCTCCGGGACCTTTTACGGTTTCTTTTAAGCTTCCGGGACCGGTTGAT
CCGCGATTGTCTTCTCCTACTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCA
Protein sequenceShow/hide protein sequence
MEGHADNTKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDQSKVKCEIKCDGKVQIEGVMTSPSVLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVD
PRLSSPTFRPDGILEVVVMKSRA