; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007606 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007606
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description(-)-germacrene D synthase-like isoform X2
Genome locationscaffold412:123..1894
RNA-Seq ExpressionMS007606
SyntenyMS007606
Gene Ontology termsGO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0000287 - magnesium ion binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsIPR001906 - Terpene synthase, N-terminal domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR008949 - Isoprenoid synthase domain superfamily
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596799.1 hypothetical protein SDJN03_09979, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3671.07Show/hide
Query:  SCNDG-VPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDE
        S +DG VPRRFANFQPSAWGDYF+S  SNTMENQ E+ M +KQLQKLKEEV +MF    KSSEKL LIDS+QRLG+S+HFE EI+ETL+ MQ +S  DD+
Subjt:  SCNDG-VPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDE

Query:  EDIYYIALRFRLLRQQGYSVS
        +DIY IAL+FRLLRQ+GYS+S
Subjt:  EDIYYIALRFRLLRQQGYSVS

XP_022143530.1 valencene synthase-like isoform X2 [Momordica charantia]3.1e-3369.17Show/hide
Query:  NDGV-PRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDEE
        NDGV  RR ANF+PS WGDYF+S   NT+     D+MV+KQL++ +EEVR M EAA K SEKLSLIDS+QRLG+SYHFE EI+E LEHMQ +S N+DD+E
Subjt:  NDGV-PRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDEE

Query:  DIYYIALRFRLLRQQGYSVS
        DIY +ALRFRLLRQQGYSVS
Subjt:  DIYYIALRFRLLRQQGYSVS

XP_022143531.1 (-)-germacrene D synthase-like isoform X1 [Momordica charantia]6.3e-3468.6Show/hide
Query:  SCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDE
        S ND V RR ANF+PS WGDYF+S   NT+     D+MV+KQL++ +EEVR M EAA K SEKLSLIDS+QRLG+SYHFE EI+E LEHMQ +S N+DD+
Subjt:  SCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDE

Query:  EDIYYIALRFRLLRQQGYSVS
        EDIY +ALRFRLLRQQGYSVS
Subjt:  EDIYYIALRFRLLRQQGYSVS

XP_022143532.1 (-)-germacrene D synthase-like isoform X2 [Momordica charantia]6.3e-3468.6Show/hide
Query:  SCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDE
        S ND V RR ANF+PS WGDYF+S   NT+     D+MV+KQL++ +EEVR M EAA K SEKLSLIDS+QRLG+SYHFE EI+E LEHMQ +S N+DD+
Subjt:  SCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDE

Query:  EDIYYIALRFRLLRQQGYSVS
        EDIY +ALRFRLLRQQGYSVS
Subjt:  EDIYYIALRFRLLRQQGYSVS

XP_022945806.1 (-)-germacrene D synthase-like isoform X2 [Cucurbita moschata]6.8e-3670.25Show/hide
Query:  SCNDG-VPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDE
        S +DG VPRRFANFQPSAWGDYF+S  SNTMENQ E+ M +KQLQKLKEEV +MF    KSSEKL LIDS+QRLG+S+HFE EI+ETL+ +Q +S  DD+
Subjt:  SCNDG-VPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDE

Query:  EDIYYIALRFRLLRQQGYSVS
        +DIY IAL+FRLLRQ+GYS+S
Subjt:  EDIYYIALRFRLLRQQGYSVS

TrEMBL top hitse value%identityAlignment
A0A6J1CP21 valencene synthase-like isoform X21.5e-3369.17Show/hide
Query:  NDGV-PRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDEE
        NDGV  RR ANF+PS WGDYF+S   NT+     D+MV+KQL++ +EEVR M EAA K SEKLSLIDS+QRLG+SYHFE EI+E LEHMQ +S N+DD+E
Subjt:  NDGV-PRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDEE

Query:  DIYYIALRFRLLRQQGYSVS
        DIY +ALRFRLLRQQGYSVS
Subjt:  DIYYIALRFRLLRQQGYSVS

A0A6J1CPK3 (-)-germacrene D synthase-like isoform X11.5e-3369.17Show/hide
Query:  NDGV-PRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDEE
        NDGV  RR ANF+PS WGDYF+S   NT+     D+MV+KQL++ +EEVR M EAA K SEKLSLIDS+QRLG+SYHFE EI+E LEHMQ +S N+DD+E
Subjt:  NDGV-PRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDEE

Query:  DIYYIALRFRLLRQQGYSVS
        DIY +ALRFRLLRQQGYSVS
Subjt:  DIYYIALRFRLLRQQGYSVS

A0A6J1CQI9 (-)-germacrene D synthase-like isoform X13.1e-3468.6Show/hide
Query:  SCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDE
        S ND V RR ANF+PS WGDYF+S   NT+     D+MV+KQL++ +EEVR M EAA K SEKLSLIDS+QRLG+SYHFE EI+E LEHMQ +S N+DD+
Subjt:  SCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDE

Query:  EDIYYIALRFRLLRQQGYSVS
        EDIY +ALRFRLLRQQGYSVS
Subjt:  EDIYYIALRFRLLRQQGYSVS

A0A6J1CR35 (-)-germacrene D synthase-like isoform X23.1e-3468.6Show/hide
Query:  SCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDE
        S ND V RR ANF+PS WGDYF+S   NT+     D+MV+KQL++ +EEVR M EAA K SEKLSLIDS+QRLG+SYHFE EI+E LEHMQ +S N+DD+
Subjt:  SCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENS-NVDDE

Query:  EDIYYIALRFRLLRQQGYSVS
        EDIY +ALRFRLLRQQGYSVS
Subjt:  EDIYYIALRFRLLRQQGYSVS

A0A6J1G1W9 (-)-germacrene D synthase-like isoform X23.3e-3670.25Show/hide
Query:  SCNDG-VPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDE
        S +DG VPRRFANFQPSAWGDYF+S  SNTMENQ E+ M +KQLQKLKEEV +MF    KSSEKL LIDS+QRLG+S+HFE EI+ETL+ +Q +S  DD+
Subjt:  SCNDG-VPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDE

Query:  EDIYYIALRFRLLRQQGYSVS
        +DIY IAL+FRLLRQ+GYS+S
Subjt:  EDIYYIALRFRLLRQQGYSVS

SwissProt top hitse value%identityAlignment
B9SBV6 Probable terpene synthase 33.1e-2351.91Show/hide
Query:  MSFQVMVSCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMV---KKQLQKLKEEVRSM-FEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEH
        M+  V  +      RR A F PS WGDYFI       +N  ++ MV   K+Q + L+EEVR M      K S KL LID +QRLG++YHFEEEI E +E 
Subjt:  MSFQVMVSCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMV---KKQLQKLKEEVRSM-FEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEH

Query:  MQENSNVDDEEDIYYIALRFRLLRQQGYSVS
         Q  SN DD+ED+Y IALRFRLLRQQGY+VS
Subjt:  MQENSNVDDEEDIYYIALRFRLLRQQGYSVS

B9SCB6 Probable terpene synthase 28.9e-2343.85Show/hide
Query:  MSFQVMVSCN--DGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEH-M
        MS Q +   N      R  A+F P+ WGD F+SC + + + +++   +++Q+++LKEEV+ M  +A + S+ L+LID +QRLGVSYHFE+EI+E L+  +
Subjt:  MSFQVMVSCN--DGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEH-M

Query:  QENSNVDDEEDIYYIALRFRLLRQQGYSVS
          NS+ D ++D++ +ALRFRLLR+QG +VS
Subjt:  QENSNVDDEEDIYYIALRFRLLRQQGYSVS

O49853 (+)-delta-cadinene synthase isozyme C21.5e-2250Show/hide
Query:  VSCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEA-AGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDD
        +S N    R  A+FQPS WGD+F++C    +     D   +K+ Q+LKEEVR M  A    S++KL+ IDSVQRLGVSYHF +EI++ LE++  N+N D 
Subjt:  VSCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEA-AGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDD

Query:  EEDIYYIALRFRLLRQQGYSVS
        E D+Y  +LRFRLLR+ GY+VS
Subjt:  EEDIYYIALRFRLLRQQGYSVS

Q39761 (+)-delta-cadinene synthase isozyme XC13.4e-2249.18Show/hide
Query:  VSCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEA-AGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDD
        +S N    R  A+FQPS WGD F++C    ++ + E     K+ Q+LKEEVR M  A    S++KL+ IDSVQRLGVSYHF +EI++ LE++  N+N D 
Subjt:  VSCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEA-AGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDD

Query:  EEDIYYIALRFRLLRQQGYSVS
        E D+Y  ++RFRLLR+ GY+VS
Subjt:  EEDIYYIALRFRLLRQQGYSVS

Q6Q3H3 (-)-germacrene D synthase1.0e-2658.62Show/hide
Query:  VPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAA-GKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDEEDIYY
        V RR ANF PS WGD+F+S  S   E    D+ +K+ +Q+LKEEVR M  AA   S++KL LID++QRLGV+YHFE EIDE L+HM + S V  EED+Y 
Subjt:  VPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAA-GKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDEEDIYY

Query:  IALRFRLLRQQGYSVS
         +LRFRLLRQQGY VS
Subjt:  IALRFRLLRQQGYSVS

Arabidopsis top hitse value%identityAlignment
AT3G25810.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein1.3e-1642.15Show/hide
Query:  RRFANFQPSAWGDYFISCGSNTMENQEE---DNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLE--HMQENSNV---DDE
        RR  N+QPS+W   ++    N   N++E    +++KK+++K+ EEV +         EKL LID +Q+LGVSYHFE+EI+  L   H++   N+   D E
Subjt:  RRFANFQPSAWGDYFISCGSNTMENQEE---DNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLE--HMQENSNV---DDE

Query:  EDIYYIALRFRLLRQQGYSVS
        ED++  AL FRLLRQ G+ VS
Subjt:  EDIYYIALRFRLLRQQGYSVS

AT3G25820.1 terpene synthase-like sequence-1,8-cineole1.2e-1442.02Show/hide
Query:  RRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSS-EKLSLIDSVQRLGVSYHFEEEIDETLE--HMQENSN---VDDEED
        RR  N+QPS W   ++    N   ++ E  ++ + +  LK++V+SM +   KS  E+L LID +Q+LGVSYHFE EI++TL   H++   N    D EED
Subjt:  RRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSS-EKLSLIDSVQRLGVSYHFEEEIDETLE--HMQENSN---VDDEED

Query:  IYYIALRFRLLRQQGYSVS
        ++  +L FRLLRQ G+ VS
Subjt:  IYYIALRFRLLRQQGYSVS

AT3G25830.1 terpene synthase-like sequence-1,8-cineole1.2e-1442.02Show/hide
Query:  RRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSS-EKLSLIDSVQRLGVSYHFEEEIDETLE--HMQENSN---VDDEED
        RR  N+QPS W   ++    N   ++ E  ++ + +  LK++V+SM +   KS  E+L LID +Q+LGVSYHFE EI++TL   H++   N    D EED
Subjt:  RRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSS-EKLSLIDSVQRLGVSYHFEEEIDETLE--HMQENSN---VDDEED

Query:  IYYIALRFRLLRQQGYSVS
        ++  +L FRLLRQ G+ VS
Subjt:  IYYIALRFRLLRQQGYSVS

AT4G16740.1 terpene synthase 033.7e-1643.55Show/hide
Query:  VPRRFANFQPSAW-GDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETL-----EHMQENSNVDDE
        V RR AN+QPS W  +Y +S G+  +   +EDN+ +  L  LK+EV  M        E+L LID++QRLGVSYHFE+EI +TL     ++++ + N  D 
Subjt:  VPRRFANFQPSAW-GDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETL-----EHMQENSNVDDE

Query:  E---DIYYIALRFRLLRQQGYSVS
            D+Y  AL FRLLRQ G+S++
Subjt:  E---DIYYIALRFRLLRQQGYSVS

AT4G16740.2 terpene synthase 033.7e-1643.55Show/hide
Query:  VPRRFANFQPSAW-GDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETL-----EHMQENSNVDDE
        V RR AN+QPS W  +Y +S G+  +   +EDN+ +  L  LK+EV  M        E+L LID++QRLGVSYHFE+EI +TL     ++++ + N  D 
Subjt:  VPRRFANFQPSAW-GDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETL-----EHMQENSNVDDE

Query:  E---DIYYIALRFRLLRQQGYSVS
            D+Y  AL FRLLRQ G+S++
Subjt:  E---DIYYIALRFRLLRQQGYSVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTTCAAGTCATGGTCTCATGCAATGATGGAGTTCCTCGACGATTTGCAAACTTTCAACCAAGTGCCTGGGGAGATTATTTCATTTCCTGTGGTTCGAATACTAT
GGAAAATCAAGAAGAAGACAACATGGTCAAGAAACAGCTTCAAAAGCTAAAAGAAGAAGTGAGAAGCATGTTTGAAGCTGCTGGAAAATCTTCAGAAAAACTAAGTTTGA
TTGATTCAGTCCAGCGTTTAGGAGTATCTTACCACTTTGAAGAGGAAATTGATGAAACCCTAGAGCACATGCAAGAGAATTCCAATGTTGATGATGAGGAGGATATTTAC
TATATTGCCCTTAGGTTTCGATTGCTTAGACAACAAGGTTATTCAGTTTCA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTTCAAGTCATGGTCTCATGCAATGATGGAGTTCCTCGACGATTTGCAAACTTTCAACCAAGTGCCTGGGGAGATTATTTCATTTCCTGTGGTTCGAATACTAT
GGAAAATCAAGAAGAAGACAACATGGTCAAGAAACAGCTTCAAAAGCTAAAAGAAGAAGTGAGAAGCATGTTTGAAGCTGCTGGAAAATCTTCAGAAAAACTAAGTTTGA
TTGATTCAGTCCAGCGTTTAGGAGTATCTTACCACTTTGAAGAGGAAATTGATGAAACCCTAGAGCACATGCAAGAGAATTCCAATGTTGATGATGAGGAGGATATTTAC
TATATTGCCCTTAGGTTTCGATTGCTTAGACAACAAGGTTATTCAGTTTCA
Protein sequenceShow/hide protein sequence
MSFQVMVSCNDGVPRRFANFQPSAWGDYFISCGSNTMENQEEDNMVKKQLQKLKEEVRSMFEAAGKSSEKLSLIDSVQRLGVSYHFEEEIDETLEHMQENSNVDDEEDIY
YIALRFRLLRQQGYSVS