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MS007609 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007609
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionomega-6 fatty acid desaturase, chloroplastic-like
Genome locationscaffold412:142135..142284
RNA-Seq ExpressionMS007609
SyntenyMS007609
Gene Ontology termsGO:0006629 - lipid metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587828.1 hypothetical protein SDJN03_16393, partial [Cucurbita argyrosperma subsp. sororia]4.1e-1380Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASYTLGLIMI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
KAG7035676.1 hypothetical protein SDJN02_02474 [Cucurbita argyrosperma subsp. argyrosperma]9.2e-1382.98Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSL
        +VFEIN VKAWKSVLVS+ASYTLGLIMI KAPWYLL LAWAWTG ++
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSL
XP_022135232.1 omega-6 fatty acid desaturase, chloroplastic [Momordica charantia]4.1e-1380Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASYTLGLIMI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
XP_022930407.1 omega-6 fatty acid desaturase, chloroplastic-like [Cucurbita moschata]4.1e-1380Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASYTLGLIMI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
XP_023529482.1 omega-6 fatty acid desaturase, chloroplastic-like [Cucurbita pepo subsp. pepo]5.4e-1378Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASYTLGL+MI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
TrEMBL top hitse value%identityAlignment
A0A0A0LTB1 FA_desaturase domain-containing protein7.6e-1376Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASY+LGL+MI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
A0A5D3BV55 Omega-6 fatty acid desaturase7.6e-1376Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASY+LGL+MI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
A0A6J1C240 omega-6 fatty acid desaturase, chloroplastic2.0e-1380Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASYTLGLIMI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
A0A6J1EQE5 omega-6 fatty acid desaturase, chloroplastic-like2.0e-1380Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASYTLGLIMI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
A0A6J1HLM6 omega-6 fatty acid desaturase, chloroplastic-like7.6e-1376Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN VKAWKSVLVS+ASYTLGL++I KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
SwissProt top hitse value%identityAlignment
P20388 Delta(12)-fatty-acid desaturase9.6e-0542.22Show/hide
Query:  FEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSL
        FE    KAW SVL+++ +  +G + I+  PWY L + W WTG +L
Subjt:  FEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSL
P46312 Omega-6 fatty acid desaturase, chloroplastic3.6e-1266Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEI+ +KA KSVL+S+ SYTLGL MI K+PWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
P48627 Omega-6 fatty acid desaturase, chloroplastic1.1e-1370Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEI+ VKAWKSVL+S+ SY LGL MI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
P48628 Omega-6 fatty acid desaturase, chloroplastic4.3e-1368Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEI+ VKAWKSVL+S+ SY LGL MI KAPWYLL LAW WTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
P48629 Omega-6 fatty acid desaturase, chloroplastic1.6e-1264Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEIN  KAW +VL+S+ SY LG+ MI KAPWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
Arabidopsis top hitse value%identityAlignment
AT4G30950.1 fatty acid desaturase 62.6e-1366Show/hide
Query:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF
        +VFEI+ +KA KSVL+S+ SYTLGL MI K+PWYLL LAWAWTG ++  F
Subjt:  KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGTGTTTGAGATAAATGGTGTGAAAGCATGGAAATCTGTTTTAGTATCTATAGCGTCGTACACACTAGGCCTTATCATGATTGTAAAAGCTCCATGGTATTTGTTACA
CTTGGCTTGGGCATGGACTGGGCTTAGTCTTATTCAATTT
mRNA sequenceShow/hide mRNA sequence
AAGGTGTTTGAGATAAATGGTGTGAAAGCATGGAAATCTGTTTTAGTATCTATAGCGTCGTACACACTAGGCCTTATCATGATTGTAAAAGCTCCATGGTATTTGTTACA
CTTGGCTTGGGCATGGACTGGGCTTAGTCTTATTCAATTT
Protein sequenceShow/hide protein sequence
KVFEINGVKAWKSVLVSIASYTLGLIMIVKAPWYLLHLAWAWTGLSLIQF