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MS007637 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007637
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein MARD1-like isoform X1
Genome locationscaffold13:95220..95600
RNA-Seq ExpressionMS007637
SyntenyMS007637
Gene Ontology termsGO:0009744 - response to sucrose (biological process)
GO:0009749 - response to glucose (biological process)
GO:0042594 - response to starvation (biological process)
InterPro domainsIPR007650 - Zf-FLZ domain
IPR044593 - FCS-Like Zinc finger 8/MARD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040806.1 protein MARD1-like [Cucumis melo var. makuwa]1.1e-4184.16Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE
        LSAGEIE SEDYTCVI+HGPNP+TTHIFGDCVIESG       RKENG F DRTSFS ENFLSFC +CKKNLE+GKDIYMYRGEKAFCSHECRYQEMMLE
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE

Query:  E
        E
Subjt:  E

XP_008447157.1 PREDICTED: protein MARD1-like [Cucumis melo]1.1e-4184.16Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE
        LSAGEIE SEDYTCVI+HGPNP+TTHIFGDCVIESG       RKENG F DRTSFS ENFLSFC +CKKNLE+GKDIYMYRGEKAFCSHECRYQEMMLE
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE

Query:  E
        E
Subjt:  E

XP_022138308.1 protein MARD1-like isoform X1 [Momordica charantia]4.7e-53100Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID
        LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID

XP_022138309.1 protein MARD1-like isoform X2 [Momordica charantia]8.4e-5096.97Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID
        LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIY+  GEKAFCSHECRYQEMMLEEGID
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID

XP_038875421.1 FCS-Like Zinc finger 8-like [Benincasa hispida]8.4e-4285.15Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE
        LSAGEIE SEDYTCVI+HGPNPRTTHIFGDCVIESG       RKENG F DRTSFSSENFLS C +CK NLEQGKDIYMYRGEKAFCSHECRYQEMMLE
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A1S3BHM4 protein MARD1-like5.3e-4284.16Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE
        LSAGEIE SEDYTCVI+HGPNP+TTHIFGDCVIESG       RKENG F DRTSFS ENFLSFC +CKKNLE+GKDIYMYRGEKAFCSHECRYQEMMLE
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE

Query:  E
        E
Subjt:  E

A0A5A7TFK1 Protein MARD1-like5.3e-4284.16Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE
        LSAGEIE SEDYTCVI+HGPNP+TTHIFGDCVIESG       RKENG F DRTSFS ENFLSFC +CKKNLE+GKDIYMYRGEKAFCSHECRYQEMMLE
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWS-----RKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE

Query:  E
        E
Subjt:  E

A0A6J1C9T2 protein MARD1-like isoform X24.1e-5096.97Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID
        LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIY+  GEKAFCSHECRYQEMMLEEGID
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID

A0A6J1CCP0 protein MARD1-like isoform X12.3e-53100Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID
        LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID

A0A6J1KWN0 protein MARD1-like isoform X19.1e-4283.17Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGW-----SRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE
        LSA EIE SEDYTCVI+HGPNPRTTHIFGDCVIESG      +RKENG F DRTSFSSENFLSFCY+CKK LE+GKDIY+YRG+KAFCSHECRYQEMMLE
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGW-----SRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLE

Query:  E
        E
Subjt:  E

SwissProt top hitse value%identityAlignment
Q8L471 FCS-Like Zinc finger 85.9e-2250Show/hide
Query:  AGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESG----WSRKENGLFTDRTSFS-SENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEG
        A ++ELSEDYTCV  HGPNPRT HIF +C++ES     + R  + +    + +S  ++FLS C +CKK+L    DI+MYRG++AFCS ECR  EMM+ E 
Subjt:  AGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESG----WSRKENGLFTDRTSFS-SENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEG

Query:  ID
         D
Subjt:  ID

Q8LGS1 Protein MARD17.7e-2252.08Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE
        L+  EI+ +EDYT VI+HGPNP  THIF + V                 + S+E+FLS C+ CKKNL+Q +DIY+YRGEK FCS ECRYQEM+L++
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE

Q8VY80 FCS-Like Zinc finger 56.3e-0856.82Show/hide
Query:  SENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE
        SE+FL  C  CK+ L  G+DIYMYRG++AFCS ECR Q++ ++E
Subjt:  SENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE

Q9LYE4 FCS-Like Zinc finger 102.9e-2147.32Show/hide
Query:  EIELSEDYTCVIAHGPNPRTTHIFGDCVIES----------GWSRKEN-------GLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHEC
        ++E+SEDYTCVI+HGPNP+TTH +GD V+ES            + KE+        L T       ++FLSFCY C K L  G+DIYMY G KAFCS EC
Subjt:  EIELSEDYTCVIAHGPNPRTTHIFGDCVIES----------GWSRKEN-------GLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHEC

Query:  RYQEMMLEEGID
        R +E+ L+E ++
Subjt:  RYQEMMLEEGID

Q9SL94 FCS-Like Zinc finger 111.9e-2054.26Show/hide
Query:  EDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTS-------FSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE
        EDYTC+IAHGPNP+TTHI+GD V+E      +N L  D  +       F S+NFL  C  C K L  G DIYMYR EK+FCS ECR +EMM++E
Subjt:  EDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTS-------FSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE

Arabidopsis top hitse value%identityAlignment
AT2G25690.1 Protein of unknown function (DUF581)1.3e-2154.26Show/hide
Query:  EDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTS-------FSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE
        EDYTC+IAHGPNP+TTHI+GD V+E      +N L  D  +       F S+NFL  C  C K L  G DIYMYR EK+FCS ECR +EMM++E
Subjt:  EDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTS-------FSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE

AT2G25690.2 Protein of unknown function (DUF581)1.3e-2154.26Show/hide
Query:  EDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTS-------FSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE
        EDYTC+IAHGPNP+TTHI+GD V+E      +N L  D  +       F S+NFL  C  C K L  G DIYMYR EK+FCS ECR +EMM++E
Subjt:  EDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTS-------FSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE

AT3G22550.1 Protein of unknown function (DUF581)4.2e-2350Show/hide
Query:  AGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESG----WSRKENGLFTDRTSFS-SENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEG
        A ++ELSEDYTCV  HGPNPRT HIF +C++ES     + R  + +    + +S  ++FLS C +CKK+L    DI+MYRG++AFCS ECR  EMM+ E 
Subjt:  AGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESG----WSRKENGLFTDRTSFS-SENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEG

Query:  ID
         D
Subjt:  ID

AT3G63210.1 Protein of unknown function (DUF581)5.5e-2352.08Show/hide
Query:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE
        L+  EI+ +EDYT VI+HGPNP  THIF + V                 + S+E+FLS C+ CKKNL+Q +DIY+YRGEK FCS ECRYQEM+L++
Subjt:  LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEE

AT5G11460.1 Protein of unknown function (DUF581)2.1e-2247.32Show/hide
Query:  EIELSEDYTCVIAHGPNPRTTHIFGDCVIES----------GWSRKEN-------GLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHEC
        ++E+SEDYTCVI+HGPNP+TTH +GD V+ES            + KE+        L T       ++FLSFCY C K L  G+DIYMY G KAFCS EC
Subjt:  EIELSEDYTCVIAHGPNPRTTHIFGDCVIES----------GWSRKEN-------GLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHEC

Query:  RYQEMMLEEGID
        R +E+ L+E ++
Subjt:  RYQEMMLEEGID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTCCGCCGGCGAGATCGAGCTCTCCGAGGACTATACCTGCGTAATCGCCCACGGCCCGAATCCTCGCACCACTCACATATTCGGCGATTGCGTCATCGAGAGCGGCTG
GTCCAGAAAAGAAAATGGGCTTTTCACAGATCGAACAAGTTTCTCCTCGGAAAATTTCCTCAGTTTCTGCTACCATTGCAAGAAGAATCTTGAACAGGGCAAAGATATTT
ACATGTACAGAGGGGAAAAGGCATTTTGCAGCCATGAGTGCCGATACCAGGAGATGATGTTGGAGGAGGGAATTGAC
mRNA sequenceShow/hide mRNA sequence
CTCTCCGCCGGCGAGATCGAGCTCTCCGAGGACTATACCTGCGTAATCGCCCACGGCCCGAATCCTCGCACCACTCACATATTCGGCGATTGCGTCATCGAGAGCGGCTG
GTCCAGAAAAGAAAATGGGCTTTTCACAGATCGAACAAGTTTCTCCTCGGAAAATTTCCTCAGTTTCTGCTACCATTGCAAGAAGAATCTTGAACAGGGCAAAGATATTT
ACATGTACAGAGGGGAAAAGGCATTTTGCAGCCATGAGTGCCGATACCAGGAGATGATGTTGGAGGAGGGAATTGAC
Protein sequenceShow/hide protein sequence
LSAGEIELSEDYTCVIAHGPNPRTTHIFGDCVIESGWSRKENGLFTDRTSFSSENFLSFCYHCKKNLEQGKDIYMYRGEKAFCSHECRYQEMMLEEGID