CuGenDBv2

Gene ID	MS007647
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal protein S3a
Genome location	scaffold13:151756..154983
RNA-Seq Expression	MS007647
Synteny	MS007647
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004153483.1 40S ribosomal protein S3a [Cucumis sativus]

1.4e-136

97.66

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK+IEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+E VEGATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

XP_022138569.1 40S ribosomal protein S3a [Momordica charantia]

3.9e-139

100

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

XP_022959011.1 40S ribosomal protein S3a-like [Cucurbita moschata]

1.4e-136

98.05

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVEGATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

XP_023000239.1 40S ribosomal protein S3a-like [Cucurbita maxima]

8.1e-137

98.44

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVE ATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

XP_023006746.1 40S ribosomal protein S3a-like [Cucurbita maxima]

2.8e-137

98.44

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVEGATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LLN9 40S ribosomal protein S3a

6.7e-137

97.66

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGK+IEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+E VEGATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

A0A6J1CAG4 40S ribosomal protein S3a

1.9e-139

100

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

A0A6J1H3P8 40S ribosomal protein S3a

6.7e-137

98.05

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVEGATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

A0A6J1KJB0 40S ribosomal protein S3a

3.9e-137

98.44

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVE ATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

A0A6J1KYM2 40S ribosomal protein S3a

1.4e-137

98.44

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKK VDPFAKKDWYDIKAPSVF+VKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPA+EVVEGATEVVGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

4.7e-127

89.11

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNFWGM+
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N ATSCDLKELV+KFIPESIG+EIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA
        YPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K++RPADE V EG TEV+GA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA

P33444 40S ribosomal protein S3a

6.7e-126

87.55

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVFSV+NVGKTLVTRTQGTKIASEGL+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNFWGM+
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKW +LIEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPESIG+EIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K+DRPA+E V   TEV+GA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEVVEGATEVVGA

P49198 40S ribosomal protein S3a

3.0e-126

87.5

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DE+H+YRKIRLRAEDVQG+NVLTNFWGM+
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
         TTDKLRSLV+KW +LIEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPESIG+EIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA
        YPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPA+E    ATEV+GA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

Q285L8 40S ribosomal protein S3a

6.3e-124

87.16

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKKA DP+AKKDWYDIKAPSVF +KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNFWGM+
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQA+SCDLKELV KFIPESIG+EIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA
        +PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK+DRPADE V E   E+ GA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA

Q8GTE3 40S ribosomal protein S3a

1.1e-128

91.05

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF+GM+
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPE IGKEIEKATSSI
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA
        YPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KV+ PADE VVEG  E+VGA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE-VVEGATEVVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

9.3e-123

85.27

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKG+KGGKKKAVDPF+KKDWYD+KAPS+F+ +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  FWGM+
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +A+SCDLK+LV KFIPE+IG+EIEKAT  I
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEV-VEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKVDRPADE+ VE  TE++GA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEV-VEGATEVVGA

AT4G34670.1 Ribosomal protein S3Ae

7.1e-123

86.05

Show/hide

Query:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN
        KNKRISKG+KGGKKKAVDPF+KKDWYD+KAP  F+ +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ+DE++AYRKIRLRAEDVQGRNVLT FWGM+
Subjt:  KNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMN

Query:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI
        FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +A+SCDLKELV KFIPE+IG+EIEKAT  I
Subjt:  FTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSI

Query:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADE-VVEGATEVVGA
        YPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKVDRPADE +VE  TE++GA
Subjt:  YPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADE-VVEGATEVVGA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

TATTATTGCAGAAAAAACAAGAGGATTTCGAAAGGTAAAAAGGGTGGCAAGAAGAAGGCTGTTGACCCATTTGCAAAGAAGGACTGGTACGATATCAAGGCTCCTTCCGT
GTTCAGTGTCAAGAACGTCGGGAAGACTCTCGTAACTCGTACGCAGGGTACCAAGATTGCTTCTGAGGGGCTTAAACATAGAGTGTTCGAGGTATCACTGGCTGACCTTC
AGGATGATGAGGAGCACGCCTACAGAAAGATTAGATTGAGAGCTGAAGATGTTCAAGGGAGGAATGTTCTAACTAATTTCTGGGGAATGAATTTTACTACTGATAAATTG
AGGTCATTGGTGAGGAAGTGGCATACATTAATAGAAGCTCACGTGGATGTTAAGACCACAGACAATTATACTCTGAGGATGTTCTGCATTGGATTTACCAAGAGACGCCC
AAACCAGGTCAAGAGGACCTGTTATGCACAATCCAGTCAGATTAGACAGATCCGTCGAAAGATGAGGGAGATCATGGTCAACCAGGCAACTTCATGTGATCTGAAAGAGT
TGGTCCGTAAGTTCATCCCTGAATCCATTGGAAAGGAAATTGAGAAGGCAACTTCTAGCATATACCCTCTACAAAATGTTTTTATCCGGAAGGTCAAGATCTTGAAAGCT
CCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCATGGTGATTATTCGGAAGATGTTGGCGTGAAGGTAGATAGGCCTGCTGATGAAGTTGTCGAGGGTGCTACCGAAGT
CGTTGGGGCA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

YYCRKNKRISKGKKGGKKKAVDPFAKKDWYDIKAPSVFSVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKA
PKFDLGKLMEVHGDYSEDVGVKVDRPADEVVEGATEVVGA

MS007647 (gene) of Bitter gourd (TR) v1 genome