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MS007656 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007656
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold13:223524..223736
RNA-Seq ExpressionMS007656
SyntenyMS007656
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593874.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2691.67Show/hide
Query:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        VV RRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PGLSLPLEYYPEAWRCKCGNSL+MP
Subjt:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

XP_008449315.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]1.2e-2678.38Show/hide
Query:  EKTEGSVPA---PEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        E+ E  +PA     V+ RRRL GPGSSPPTCRSKCGSC PCTAVHVPIQPGLSLPLEYYPEAWRCKCGN+L+MP
Subjt:  EKTEGSVPA---PEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

XP_022138712.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Momordica charantia]1.9e-35100Show/hide
Query:  EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
Subjt:  EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

XP_023000566.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima]1.6e-2691.67Show/hide
Query:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        VV RRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PGLSLPLEYYPEAWRCKCGNSL+MP
Subjt:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

XP_023513820.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo]1.6e-2691.67Show/hide
Query:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        VV RRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PGLSLPLEYYPEAWRCKCGNSL+MP
Subjt:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

TrEMBL top hitse value%identityAlignment
A0A1S3BMN7 Epidermal patterning factor-like protein5.9e-2778.38Show/hide
Query:  EKTEGSVPA---PEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        E+ E  +PA     V+ RRRL GPGSSPPTCRSKCGSC PCTAVHVPIQPGLSLPLEYYPEAWRCKCGN+L+MP
Subjt:  EKTEGSVPA---PEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

A0A5A7UQS2 Epidermal patterning factor-like protein5.9e-2778.38Show/hide
Query:  EKTEGSVPA---PEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        E+ E  +PA     V+ RRRL GPGSSPPTCRSKCGSC PCTAVHVPIQPGLSLPLEYYPEAWRCKCGN+L+MP
Subjt:  EKTEGSVPA---PEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

A0A6J1CBX1 Epidermal patterning factor-like protein9.1e-36100Show/hide
Query:  EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
Subjt:  EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

A0A6J1ERG1 Epidermal patterning factor-like protein7.7e-2791.67Show/hide
Query:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        VV RRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PGLSLPLEYYPEAWRCKCGNSL+MP
Subjt:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

A0A6J1KG67 Epidermal patterning factor-like protein7.7e-2791.67Show/hide
Query:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        VV RRRL GPGSSPPTCRSKCGSC+PCTAVHVPI PGLSLPLEYYPEAWRCKCGNSL+MP
Subjt:  VVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 66.7e-2065.57Show/hide
Query:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        E  +RR L G GSSPP C SKCG C+PC  VHVP+ PG  +  EYYPEAWRCKCGN L+MP
Subjt:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 45.7e-2770.42Show/hide
Query:  EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        ++T   +P   +   +R GGPGSSPPTCRSKCG C PC  VHVPIQPGLS+PLEYYPEAWRCKCGN LFMP
Subjt:  EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

Q7M1E7 Polygalacturonase6.5e-0740.82Show/hide
Query:  SSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        SSPP C++KC  C PC    + + P  + P +YYP+ W C C N ++ P
Subjt:  SSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

Q9FY19 Polygalacturonase8.5e-0740.82Show/hide
Query:  SSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        SSPP C++KC  C PC    + + P  + P +YYP+ W C C N ++ P
Subjt:  SSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 52.4e-2577.05Show/hide
Query:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        ++V ++RLGGPGS PP CR KCG C PC AVHVPIQPGL +PLEYYPEAWRCKCGN LFMP
Subjt:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related4.8e-2165.57Show/hide
Query:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        E  +RR L G GSSPP C SKCG C+PC  VHVP+ PG  +  EYYPEAWRCKCGN L+MP
Subjt:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

AT2G30370.2 allergen-related4.8e-2165.57Show/hide
Query:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        E  +RR L G GSSPP C SKCG C+PC  VHVP+ PG  +  EYYPEAWRCKCGN L+MP
Subjt:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

AT3G22820.1 allergen-related1.7e-2677.05Show/hide
Query:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        ++V ++RLGGPGS PP CR KCG C PC AVHVPIQPGL +PLEYYPEAWRCKCGN LFMP
Subjt:  EVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)4.0e-2870.42Show/hide
Query:  EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP
        ++T   +P   +   +R GGPGSSPPTCRSKCG C PC  VHVPIQPGLS+PLEYYPEAWRCKCGN LFMP
Subjt:  EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP

AT4G37810.1 unknown protein2.5e-0636Show/hide
Query:  GSSPPTC-RSKCGSCSPCTAVHVPIQPGLSL--PL----------------------EYYPEAWRCKCGNSLFMP
        GS PP C R +C SC  C A+ VP  P   L  PL                       Y P +W+CKCGNS++ P
Subjt:  GSSPPTC-RSKCGSCSPCTAVHVPIQPGLSL--PL----------------------EYYPEAWRCKCGNSLFMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAAAACAGAGGGAAGCGTGCCGGCGCCGGAAGTGGTGATTCGGCGGAGATTGGGTGGGCCCGGGTCGTCGCCGCCGACCTGCAGATCGAAGTGCGGGAGTTGCTCGCC
GTGCACGGCGGTGCACGTGCCAATTCAGCCGGGATTAAGCCTGCCGCTGGAGTATTACCCAGAAGCGTGGCGCTGCAAATGCGGCAATTCCCTCTTCATGCCA
mRNA sequenceShow/hide mRNA sequence
GAGAAAACAGAGGGAAGCGTGCCGGCGCCGGAAGTGGTGATTCGGCGGAGATTGGGTGGGCCCGGGTCGTCGCCGCCGACCTGCAGATCGAAGTGCGGGAGTTGCTCGCC
GTGCACGGCGGTGCACGTGCCAATTCAGCCGGGATTAAGCCTGCCGCTGGAGTATTACCCAGAAGCGTGGCGCTGCAAATGCGGCAATTCCCTCTTCATGCCA
Protein sequenceShow/hide protein sequence
EKTEGSVPAPEVVIRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLFMP