; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007673 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007673
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold13:342617..343192
RNA-Seq ExpressionMS007673
SyntenyMS007673
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150434.1 auxin-induced protein 22B [Cucumis sativus]2.5e-6289.31Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATA-EGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML
        +AQVVGWPPIRSFRKNTLQ KKTEA  TA +GGG +VKVSMDGAPYLRKIDL VYKGYPELLKALEDMFKFTIGQYSEREGYKGS+FAPTYEDKDGDWML
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATA-EGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML

Query:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        VGDVPWQMFI SCKR+RIM+GS+VGGLSCGV
Subjt:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV

XP_008449289.1 PREDICTED: auxin-induced protein 22B [Cucumis melo]2.8e-6187.79Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEA-AATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML
        +AQVVGWPPIRSFRKNTLQ KKTEA  A  +GGG +VKVSMDGAPYLRKIDL VYKGYPE LKALEDMFKFTIGQYSEREGYKGS+FAPTYEDKDGDWML
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEA-AATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML

Query:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        VGDVPWQMFI SCKR+RIM+GS+VGGLSCGV
Subjt:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV

XP_022138413.1 auxin-responsive protein IAA4-like [Momordica charantia]2.8e-6999.23Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +AQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV

XP_023539614.1 auxin-responsive protein IAA4-like [Cucurbita pepo subsp. pepo]5.8e-5982.31Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        ++QVVGWPPIRSFRKNTL  KKTEA   AEGGG +VKVSMDGAPYLRK+DLGVYKGYPEL+K LE+MFKF +G YSEREGY+GS++APTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        GDVPWQMFI SCKR+RIM+GS+VGGLSCGV
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV

XP_038875234.1 auxin-induced protein 22B-like [Benincasa hispida]3.3e-6289.31Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAA-ATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML
        +AQVVGWPPIRSFRKNTLQ KKTEA  A A+GGG +VKVSMDGAPYLRKIDL +YKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAA-ATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML

Query:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        VGDVPWQMFI SCKR+RIM+GS+VGGLSCGV
Subjt:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV

TrEMBL top hitse value%identityAlignment
A0A0A0LIA8 Auxin-responsive protein1.2e-6289.31Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATA-EGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML
        +AQVVGWPPIRSFRKNTLQ KKTEA  TA +GGG +VKVSMDGAPYLRKIDL VYKGYPELLKALEDMFKFTIGQYSEREGYKGS+FAPTYEDKDGDWML
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATA-EGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML

Query:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        VGDVPWQMFI SCKR+RIM+GS+VGGLSCGV
Subjt:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV

A0A1S3BMB6 Auxin-responsive protein1.4e-6187.79Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEA-AATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML
        +AQVVGWPPIRSFRKNTLQ KKTEA  A  +GGG +VKVSMDGAPYLRKIDL VYKGYPE LKALEDMFKFTIGQYSEREGYKGS+FAPTYEDKDGDWML
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEA-AATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML

Query:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        VGDVPWQMFI SCKR+RIM+GS+VGGLSCGV
Subjt:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV

A0A5A7UVE4 Auxin-responsive protein1.4e-6187.79Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEA-AATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML
        +AQVVGWPPIRSFRKNTLQ KKTEA  A  +GGG +VKVSMDGAPYLRKIDL VYKGYPE LKALEDMFKFTIGQYSEREGYKGS+FAPTYEDKDGDWML
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEA-AATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWML

Query:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        VGDVPWQMFI SCKR+RIM+GS+VGGLSCGV
Subjt:  VGDVPWQMFILSCKRLRIMRGSDVGGLSCGV

A0A6J1CCX2 Auxin-responsive protein1.3e-6999.23Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +AQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV

A0A6J1IED3 Auxin-responsive protein2.8e-5982.31Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        ++QVVGWPPIRSFRKNTL  KKTEA   AEGGG +VKVSMDGAPYLRK+DLGVYKGYPEL+K LE+MFKF +G YSEREGY+GS++APTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        GDVPWQMFI SCKR+RIM+GS+VGGLSCGV
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV

SwissProt top hitse value%identityAlignment
O24542 Auxin-induced protein 22D2.5e-5275Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +AQVVGWPPIRS+RKN +Q KK E    +EG G +VKVSM GAPYLRKIDL VYK YPELLKALE+MFK   G+YSEREGY GSE+APTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSC
        GDVPW MF+ SCKRLRIM+GS+  GL C
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSC

P32294 Auxin-induced protein 22B5.5e-5273.08Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +A++VGWPPIRS+RKN++Q          EG G FVKVSMDGAPYLRK+DL VY GYPELLKALE MFK  IG+YSEREGYKGSE+APTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        GDVPW MF+ SCKRLRIM+GS+  GL C V
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV

P33077 Auxin-responsive protein IAA41.5e-5472.87Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +AQ+VGWPP+RS+RKN +Q KK+E    +EG G++VKVSMDGAPYLRKIDL +YK YPEL+K+LE+MFKF++G+Y EREGYKGS+F PTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCG
        GDVPW+MF+ SCKRLRIM+GS+V GL CG
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCG

P49679 Auxin-induced protein IAA44.2e-5273.85Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +A++VGWPPIRS+RKN+L          A+ GG FVKVSMDGAPYLRKIDL VY GY ELLKALE MFK TIG+YSEREGYKGSE+APTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        GDVPW MF+ SCKRLRIM+G++  GL CGV
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV

Q38822 Auxin-responsive protein IAA31.0e-5372.31Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +AQ+VGWPP+RS+RKN +Q+KK E  +  EG G +VKVSMDGAPYLRKIDL  YKGY ELLKALE MFKF++G+Y ER+GYKGS+F PTYEDKDGDWML+
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        GDVPW+MFI +CKRLRIM+GS+  GL CGV
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein7.1e-5572.31Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +AQ+VGWPP+RS+RKN +Q+KK E  +  EG G +VKVSMDGAPYLRKIDL  YKGY ELLKALE MFKF++G+Y ER+GYKGS+F PTYEDKDGDWML+
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV
        GDVPW+MFI +CKRLRIM+GS+  GL CGV
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCGV

AT3G04730.1 indoleacetic acid-induced protein 161.3e-3750.94Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGG------------------SFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMF-KFTIGQYSEREGY
        +AQVVGWPP+RSFRKN +  +K       EG                    ++VKVSMDGAPYLRKIDL +YK Y +L  AL  MF  FTIG Y   +G 
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGG------------------SFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMF-KFTIGQYSEREGY

Query:  K-------------GSEFAPTYEDKDGDWMLVGDVPWQMFILSCKRLRIMRGSDVGGLS
        K             GS++ PTYEDKDGDWMLVGDVPW+MF+ SCKR+RIM+GS+  GL+
Subjt:  K-------------GSEFAPTYEDKDGDWMLVGDVPWQMFILSCKRLRIMRGSDVGGLS

AT3G23030.1 indole-3-acetic acid inducible 22.3e-4568.25Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        + Q+VGWPP+RS RKN                 S+VKVSMDGAPYLRKIDL  YK YPELLKALE+MFK  IG+Y EREGYKGS F PTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGL
        GDVPW MF  SCKRLRIM+GSD   L
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGL

AT4G14560.1 indole-3-acetic acid inducible7.9e-4668.85Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        + Q+VGWPP+RS RKN                 S+VKVSMDGAPYLRKIDL +YK YPELLKALE+MFKFT+G+YSEREGYKGS F PTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSD
        GDVPW MF  SC++LRIM+GS+
Subjt:  GDVPWQMFILSCKRLRIMRGSD

AT5G43700.1 AUX/IAA transcriptional regulator family protein1.1e-5572.87Show/hide
Query:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV
        +AQ+VGWPP+RS+RKN +Q KK+E    +EG G++VKVSMDGAPYLRKIDL +YK YPEL+K+LE+MFKF++G+Y EREGYKGS+F PTYEDKDGDWMLV
Subjt:  RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLV

Query:  GDVPWQMFILSCKRLRIMRGSDVGGLSCG
        GDVPW+MF+ SCKRLRIM+GS+V GL CG
Subjt:  GDVPWQMFILSCKRLRIMRGSDVGGLSCG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAGCTCAGGTAGTGGGGTGGCCGCCGATTAGATCTTTCCGGAAAAACACTCTTCAGGCGAAGAAGACGGAGGCGGCGGCGACGGCGGAGGGCGGCGGGAGTTTTGTGAA
AGTGAGCATGGATGGAGCTCCTTATTTGAGGAAAATCGATTTGGGGGTTTACAAGGGCTACCCGGAACTTCTCAAGGCCTTGGAGGACATGTTCAAGTTCACCATCGGTC
AGTACTCTGAGAGGGAAGGCTATAAGGGGTCTGAATTTGCCCCAACTTATGAAGACAAAGATGGAGATTGGATGCTGGTTGGCGATGTTCCATGGCAAATGTTCATTTTG
TCGTGCAAGAGGTTGAGAATCATGAGAGGATCAGACGTCGGGGGATTGAGCTGTGGCGTT
mRNA sequenceShow/hide mRNA sequence
AGAGCTCAGGTAGTGGGGTGGCCGCCGATTAGATCTTTCCGGAAAAACACTCTTCAGGCGAAGAAGACGGAGGCGGCGGCGACGGCGGAGGGCGGCGGGAGTTTTGTGAA
AGTGAGCATGGATGGAGCTCCTTATTTGAGGAAAATCGATTTGGGGGTTTACAAGGGCTACCCGGAACTTCTCAAGGCCTTGGAGGACATGTTCAAGTTCACCATCGGTC
AGTACTCTGAGAGGGAAGGCTATAAGGGGTCTGAATTTGCCCCAACTTATGAAGACAAAGATGGAGATTGGATGCTGGTTGGCGATGTTCCATGGCAAATGTTCATTTTG
TCGTGCAAGAGGTTGAGAATCATGAGAGGATCAGACGTCGGGGGATTGAGCTGTGGCGTT
Protein sequenceShow/hide protein sequence
RAQVVGWPPIRSFRKNTLQAKKTEAAATAEGGGSFVKVSMDGAPYLRKIDLGVYKGYPELLKALEDMFKFTIGQYSEREGYKGSEFAPTYEDKDGDWMLVGDVPWQMFIL
SCKRLRIMRGSDVGGLSCGV