; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007691 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007691
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionC2H2-type domain-containing protein
Genome locationscaffold13:531127..531591
RNA-Seq ExpressionMS007691
SyntenyMS007691
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593853.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3559.6Show/hide
Query:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKL
        K+++   PQ + + + K NNTRG  +++  EEEE   GF W   RAY CGFC R+FRSAQALGGHMNVHRRDRAKLRRSPP+DS     +SS+P+K+LKL
Subjt:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKL

Query:  SDLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
         D SS  +GEEE + G  +IW+ VKKFV   KEI  +GSS+EIDLELRLGF
Subjt:  SDLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

XP_008465205.1 PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo]4.1e-3555.48Show/hide
Query:  EMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS---------FSASSEPVKY
        +MKPQ KAKAS K++N R G +++  +E+E    FPW   RAY CGFC RQF+SAQALGGHMNVHRRDRAKLRRS P+DS+           +SS+P+K+
Subjt:  EMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS---------FSASSEPVKY

Query:  LKLSDLSSFNNGE-EETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
        LKL D SSF+  + ++ + GG +IW+KV KFV+ +KE +L+ +S++IDLELRLGF
Subjt:  LKLSDLSSFNNGE-EETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

XP_022930268.1 zinc finger protein 10-like [Cucurbita moschata]3.1e-3559.6Show/hide
Query:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKL
        K+++   PQ + +   K NNTRG  +++  EEEE   GF W   RAY CGFC R+FRSAQALGGHMNVHRRDRAKLRRSPP+DS     +SS+P+K+LKL
Subjt:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKL

Query:  SDLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
         D SS  +GEEE + G  +IW+ VKKFV   KEI  +GSS+EIDLELRLGF
Subjt:  SDLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

XP_023514445.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo]3.1e-3559.06Show/hide
Query:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKLSD
        K+++   PQ + + + K NNTRG  +++  EE+  GF W   RAY CGFC RQFRSAQALGGHMNVHRRDRAKLRRSPP+ S     +SS+P+K+LKL D
Subjt:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKLSD

Query:  LSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
         SS   GEEE + G  +IW+ VKKFV   KEI  +GSS+EIDLELRLGF
Subjt:  LSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

XP_038875029.1 transcriptional regulator TAC1-like [Benincasa hispida]5.9e-3456Show/hide
Query:  EMKPQTKAKASCKNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS-------FSASSEPVKYLKLS
        +MKPQ  AKAS K N+TR   +++  +E   GFPW   RAY CGFC R+F+SAQALGGHMNVHRRDRAKLRR+P +DS+         +SS+P+K+LKL 
Subjt:  EMKPQTKAKASCKNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS-------FSASSEPVKYLKLS

Query:  DLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
        D SSF +GEE+ + GG +IW+KV KFV+   E +L+ +S++IDLEL+LGF
Subjt:  DLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

TrEMBL top hitse value%identityAlignment
A0A0A0LNQ1 C2H2-type domain-containing protein4.9e-3456.13Show/hide
Query:  EMKPQTKAKASCKNNNTRGGGEKQGGEEE-ETGFPWPPPRA-YKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS---------FSASSEPVKY
        +MKPQ KAKAS K+NN R G +++  E+E    FPW   RA Y CGFC RQF+SAQALGGHMNVHRRDRAKLRRS P+DS+           +SS+P+K+
Subjt:  EMKPQTKAKASCKNNNTRGGGEKQGGEEE-ETGFPWPPPRA-YKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS---------FSASSEPVKY

Query:  LKLSDLSSFNNGE-EETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
        LKL D SSF+  + ++ + GG +IW+KV KFV+  KE +L+ +S++IDLELRLGF
Subjt:  LKLSDLSSFNNGE-EETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

A0A1S3CPU8 transcriptional regulator SUPERMAN2.0e-3555.48Show/hide
Query:  EMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS---------FSASSEPVKY
        +MKPQ KAKAS K++N R G +++  +E+E    FPW   RAY CGFC RQF+SAQALGGHMNVHRRDRAKLRRS P+DS+           +SS+P+K+
Subjt:  EMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS---------FSASSEPVKY

Query:  LKLSDLSSFNNGE-EETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
        LKL D SSF+  + ++ + GG +IW+KV KFV+ +KE +L+ +S++IDLELRLGF
Subjt:  LKLSDLSSFNNGE-EETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

A0A5D3CAK0 Transcriptional regulator SUPERMAN2.0e-3555.48Show/hide
Query:  EMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS---------FSASSEPVKY
        +MKPQ KAKAS K++N R G +++  +E+E    FPW   RAY CGFC RQF+SAQALGGHMNVHRRDRAKLRRS P+DS+           +SS+P+K+
Subjt:  EMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS---------FSASSEPVKY

Query:  LKLSDLSSFNNGE-EETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
        LKL D SSF+  + ++ + GG +IW+KV KFV+ +KE +L+ +S++IDLELRLGF
Subjt:  LKLSDLSSFNNGE-EETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

A0A6J1EUL3 zinc finger protein 10-like1.5e-3559.6Show/hide
Query:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKL
        K+++   PQ + +   K NNTRG  +++  EEEE   GF W   RAY CGFC R+FRSAQALGGHMNVHRRDRAKLRRSPP+DS     +SS+P+K+LKL
Subjt:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKL

Query:  SDLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
         D SS  +GEEE + G  +IW+ VKKFV   KEI  +GSS+EIDLELRLGF
Subjt:  SDLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

A0A6J1KIV9 transcriptional regulator SUPERMAN-like3.7e-3458.28Show/hide
Query:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKL
        K+++   PQ + + + K  NTRG  +++  EEEE   GF W   RAY CGFC R+FRSAQALGGHMNVHRRDRAKLRRSPP+ S     +SS+P+K+LKL
Subjt:  KAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEE--TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSS--FSASSEPVKYLKL

Query:  SDLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF
         D SS  +GEEE + G  +IW+ VKKFV   KEI  +GSS+EIDLELRLGF
Subjt:  SDLSSFNNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 105.6e-1148.65Show/hide
Query:  KNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEP
        K+N      E    E++  G  W PPR+Y C FC R+F+SAQALGGHMNVHRRDRA+L+++        +SS P
Subjt:  KNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEP

Q38895 Transcriptional regulator SUPERMAN1.7e-1267.27Show/hide
Query:  GFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEP
        GF W PPR+Y C FC R+FRSAQALGGHMNVHRRDRA+LR    +  S S+SS P
Subjt:  GFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEP

Q9LHS9 Probable transcriptional regulator RABBIT EARS4.3e-1147.67Show/hide
Query:  GFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEPV--KYLKLSDLSSFNNGEEET---NGGGSEI
        G  W PPR+Y C FC R+F+SAQALGGHMNVHRRDRA+L++     SS   ++ P   +  ++ D+ S    +EET   NG   EI
Subjt:  GFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEPV--KYLKLSDLSSFNNGEEET---NGGGSEI

Q9SLB8 Zinc finger protein 116.6e-1278.05Show/hide
Query:  PWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSP
        PW PP+ Y C FC R+FRSAQALGGHMNVHRRDRAKLR+ P
Subjt:  PWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSP

Q9SR34 Transcriptional regulator TAC12.9e-0744.29Show/hide
Query:  RAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEPVKYLKLSDLSSFNNGEEETNGG
        R+Y C FC R F +AQALGGHMN+HRRDRAKLR+    D+     +E       S++ S +  E++   G
Subjt:  RAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEPVKYLKLSDLSSFNNGEEETNGG

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 104.0e-1248.65Show/hide
Query:  KNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEP
        K+N      E    E++  G  W PPR+Y C FC R+F+SAQALGGHMNVHRRDRA+L+++        +SS P
Subjt:  KNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEP

AT2G42410.1 zinc finger protein 114.7e-1378.05Show/hide
Query:  PWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSP
        PW PP+ Y C FC R+FRSAQALGGHMNVHRRDRAKLR+ P
Subjt:  PWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSP

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-1367.27Show/hide
Query:  GFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEP
        GF W PPR+Y C FC R+FRSAQALGGHMNVHRRDRA+LR    +  S S+SS P
Subjt:  GFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEP

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-1173.17Show/hide
Query:  TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLR
        +G  W PPR+Y C FC R+FRSAQALGGHMNVHRRDRA  R
Subjt:  TGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLR

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein3.0e-1247.67Show/hide
Query:  GFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEPV--KYLKLSDLSSFNNGEEET---NGGGSEI
        G  W PPR+Y C FC R+F+SAQALGGHMNVHRRDRA+L++     SS   ++ P   +  ++ D+ S    +EET   NG   EI
Subjt:  GFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEPV--KYLKLSDLSSFNNGEEET---NGGGSEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGCCAACAACACCAACAACATGAAAGCAATCGAGGAAATGAAGCCACAAACAAAGGCCAAAGCTTCATGCAAAAACAATAATACAAGAGGAGGAGGAGAAAAACAAGG
AGGAGAAGAAGAAGAAACTGGATTTCCATGGCCTCCTCCAAGAGCTTATAAATGTGGGTTCTGCAATAGGCAATTTCGGTCAGCTCAAGCTCTCGGTGGCCACATGAACG
TCCACCGAAGAGACCGCGCGAAGCTCAGAAGATCTCCTCCAATGGATTCTTCTTTTTCTGCCTCTTCTGAGCCCGTTAAATATCTCAAACTGTCTGATCTCTCGAGCTTT
AACAATGGCGAAGAAGAAACAAATGGTGGTGGGAGCGAGATTTGGAGGAAGGTGAAGAAGTTTGTGAGGATGGAGAAGGAGATTAGTTTGGTTGGTAGTTCTAGTGAGAT
TGATTTGGAACTTAGATTAGGGTTT
mRNA sequenceShow/hide mRNA sequence
GAAGCCAACAACACCAACAACATGAAAGCAATCGAGGAAATGAAGCCACAAACAAAGGCCAAAGCTTCATGCAAAAACAATAATACAAGAGGAGGAGGAGAAAAACAAGG
AGGAGAAGAAGAAGAAACTGGATTTCCATGGCCTCCTCCAAGAGCTTATAAATGTGGGTTCTGCAATAGGCAATTTCGGTCAGCTCAAGCTCTCGGTGGCCACATGAACG
TCCACCGAAGAGACCGCGCGAAGCTCAGAAGATCTCCTCCAATGGATTCTTCTTTTTCTGCCTCTTCTGAGCCCGTTAAATATCTCAAACTGTCTGATCTCTCGAGCTTT
AACAATGGCGAAGAAGAAACAAATGGTGGTGGGAGCGAGATTTGGAGGAAGGTGAAGAAGTTTGTGAGGATGGAGAAGGAGATTAGTTTGGTTGGTAGTTCTAGTGAGAT
TGATTTGGAACTTAGATTAGGGTTT
Protein sequenceShow/hide protein sequence
EANNTNNMKAIEEMKPQTKAKASCKNNNTRGGGEKQGGEEEETGFPWPPPRAYKCGFCNRQFRSAQALGGHMNVHRRDRAKLRRSPPMDSSFSASSEPVKYLKLSDLSSF
NNGEEETNGGGSEIWRKVKKFVRMEKEISLVGSSSEIDLELRLGF