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MS007692 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007692
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionC2H2-like zinc finger protein
Genome locationscaffold13:535379..535465
RNA-Seq ExpressionMS007692
SyntenyMS007692
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593852.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]1.8e-08100Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
XP_022138758.1 transcriptional regulator TAC1-like [Momordica charantia]1.8e-08100Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
XP_022930490.1 probable transcriptional regulator RABBIT EARS [Cucurbita moschata]1.8e-08100Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
XP_023000554.1 zinc finger protein GIS-like [Cucurbita maxima]1.8e-08100Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
XP_023514446.1 probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo]1.8e-08100Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
TrEMBL top hitse value%identityAlignment
A0A059D397 C2H2-type domain-containing protein5.6e-0893.1Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGC+FCKRGFT AQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
A0A1U8BEM4 transcriptional regulator SUPERMAN-like5.6e-0893.1Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGC+FCKRGFT AQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
A0A6J1CE07 transcriptional regulator TAC1-like8.6e-09100Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
A0A6J1EX07 probable transcriptional regulator RABBIT EARS8.6e-09100Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
A0A6J1KKB3 zinc finger protein GIS-like8.6e-09100Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.0e-0672.41Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSY C FC+R F +AQALGGHMN+HR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Q38895 Transcriptional regulator SUPERMAN4.5e-0775.86Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSY C FCKR F +AQALGGHMN+HR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Q9LHS9 Probable transcriptional regulator RABBIT EARS1.7e-0672.41Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSY C FC R F +AQALGGHMN+HR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Q9SLB8 Zinc finger protein 115.0e-0665.52Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        ++Y C FC+R F +AQALGGHMN+HR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Q9SR34 Transcriptional regulator TAC17.0e-0882.76Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSY C FC RGF+NAQALGGHMNIHR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 107.2e-0872.41Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSY C FC+R F +AQALGGHMN+HR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
AT3G09290.1 telomerase activator15.0e-0982.76Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSY C FC RGF+NAQALGGHMNIHR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein3.2e-0875.86Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        RSY C FCKR F +AQALGGHMN+HR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein5.0e-0982.76Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        R Y C FC+RGF+NAQALGGHMNIHRKDR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein4.5e-1086.21Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR
        R Y C FCKRGFTNAQALGGHMNIHR+DR
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTTCATATGGATGCATATTTTGCAAGAGGGGATTCACCAACGCTCAGGCTCTTGGTGGCCACATGAATATCCATAGAAAAGATCGA
mRNA sequenceShow/hide mRNA sequence
CGTTCATATGGATGCATATTTTGCAAGAGGGGATTCACCAACGCTCAGGCTCTTGGTGGCCACATGAATATCCATAGAAAAGATCGA
Protein sequenceShow/hide protein sequence
RSYGCIFCKRGFTNAQALGGHMNIHRKDR