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MS007695 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007695
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionbet1-like SNARE 1-2
Genome locationscaffold13:546611..548063
RNA-Seq ExpressionMS007695
SyntenyMS007695
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR039897 - BET1-like protein
IPR039899 - BET1, SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151397.1 bet1-like SNARE 1-2 [Cucumis sativus]6.8e-5497.41Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
        REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
Subjt:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL

Query:  AVYFVLSFLLLFYLIR
        A+YFVLSFLLLFYLIR
Subjt:  AVYFVLSFLLLFYLIR

XP_008447527.1 PREDICTED: bet1-like SNARE 1-2 [Cucumis melo]2.6e-5395.69Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
        REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
Subjt:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL

Query:  AVYFVLSFLLLFYLIR
        A+YF+LSFLL FYLIR
Subjt:  AVYFVLSFLLLFYLIR

XP_022138310.1 bet1-like SNARE 1-2 [Momordica charantia]5.2e-5498.28Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
        REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQK KWRTCRL
Subjt:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL

Query:  AVYFVLSFLLLFYLIR
        AVYFVLSF LLFYLIR
Subjt:  AVYFVLSFLLLFYLIR

XP_038906833.1 bet1-like SNARE 1-2 isoform X1 [Benincasa hispida]7.5e-5394.83Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
        +EHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALH+LEDR+SILKRLTGDIHEEVESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQK+KWRTCRL
Subjt:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL

Query:  AVYFVLSFLLLFYLIR
        A+YFVLSFLLLFYLIR
Subjt:  AVYFVLSFLLLFYLIR

XP_038906834.1 bet1-like SNARE 1-2 isoform X2 [Benincasa hispida]2.6e-5395.69Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
        REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALH+LEDR+SILKRLTGDIHEEVESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQK+KWRTCRL
Subjt:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL

Query:  AVYFVLSFLLLFYLIR
        A+YFVLSFLLLFYLIR
Subjt:  AVYFVLSFLLLFYLIR

TrEMBL top hitse value%identityAlignment
A0A0A0L808 t-SNARE coiled-coil homology domain-containing protein3.3e-5497.41Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
        REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
Subjt:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL

Query:  AVYFVLSFLLLFYLIR
        A+YFVLSFLLLFYLIR
Subjt:  AVYFVLSFLLLFYLIR

A0A1S3BHN2 bet1-like SNARE 1-21.2e-5395.69Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
        REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALH+LEDRVSILKRLTGDIHEEVESHN+LLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
Subjt:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL

Query:  AVYFVLSFLLLFYLIR
        A+YF+LSFLL FYLIR
Subjt:  AVYFVLSFLLLFYLIR

A0A6J1C943 bet1-like SNARE 1-22.5e-5498.28Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL
        REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQK KWRTCRL
Subjt:  REHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRL

Query:  AVYFVLSFLLLFYLIR
        AVYFVLSF LLFYLIR
Subjt:  AVYFVLSFLLLFYLIR

A0A6J1EPS6 bet1-like SNARE 1-22.2e-5093.16Show/hide
Query:  REHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCR
        REHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL +LEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCR
Subjt:  REHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCR

Query:  LAVYFVLSFLLLFYLIR
        LAVYFVLSFLLLFYLIR
Subjt:  LAVYFVLSFLLLFYLIR

A0A6J1KMZ6 bet1-like SNARE 1-22.2e-5093.16Show/hide
Query:  REHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCR
        REHRSSRSALFDDLEEGGLR S S+VEIKEHDND+AL +LEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMD+SRGIMSRTMDRFKMVFEQK+KWRTCR
Subjt:  REHRSSRSALFDDLEEGGLRTS-SSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCR

Query:  LAVYFVLSFLLLFYLIR
        LAVYFVLSFLLLFYLIR
Subjt:  LAVYFVLSFLLLFYLIR

SwissProt top hitse value%identityAlignment
O15155 BET1 homolog8.7e-0425Show/hide
Query:  EHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLAVYFVLSFLLLFYLIR
        E +N++   SL  +V+ +K L+ +I  EV++ N LL  M +  D++ G + +TM + K++         C + ++ +  F +++++I+
Subjt:  EHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLAVYFVLSFLLLFYLIR

O35623 BET1 homolog1.8e-0427.27Show/hide
Query:  EHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLAVYFVLSFLLLFYLIR
        E +ND+   SL  +V+ +K L+ +I  EV++ N LL  M +  D++ G + +TM R K++         C + ++ +  F +++++I+
Subjt:  EHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLAVYFVLSFLLLFYLIR

Q62896 BET1 homolog1.3e-0426.32Show/hide
Query:  RSALFDDLEEGGL----RTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLAV
        R+ L D    GG       +S     E +ND+   SL  +V+ +K L+ +I  EV++ N LL  M +  D++ G + +TM R K++         C + +
Subjt:  RSALFDDLEEGGL----RTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLAV

Query:  YFVLSFLLLFYLIR
        + +  F +++++I+
Subjt:  YFVLSFLLLFYLIR

Q94CG2 Bet1-like SNARE 1-24.0e-3362.18Show/hide
Query:  REHRSSRSALF---DDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRT
        RE+R+SR++LF   D LEEG LR SSS    E DND+AL +L+DRVS LKR+TGDIHEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K+  ++
Subjt:  REHRSSRSALF---DDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRT

Query:  CRLAVYFVLSFLLLFYLIR
        C+L  YFVL FL+++YLIR
Subjt:  CRLAVYFVLSFLLLFYLIR

Q9M2J9 Bet1-like SNARE 1-12.1e-2958.47Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTC
        RE R  RS+LFD +EEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE K+  R  
Subjt:  REHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTC

Query:  RLAVYFVLSFLLLFYLIR
         L   FV  FL+++YL R
Subjt:  RLAVYFVLSFLLLFYLIR

Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A1.5e-3058.47Show/hide
Query:  REHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTC
        RE R  RS+LFD +EEGG+R +SS   EI EH+N++AL  L+DRV +LKRL+GDI+EEV++HN +LDRMGN MD+SRG +S TMDRFK VFE K+  R  
Subjt:  REHRSSRSALFDDLEEGGLRTSSSV--EIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTC

Query:  RLAVYFVLSFLLLFYLIR
         L   FV  FL+++YL R
Subjt:  RLAVYFVLSFLLLFYLIR

AT4G14455.1 Target SNARE coiled-coil domain protein2.9e-3462.18Show/hide
Query:  REHRSSRSALF---DDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRT
        RE+R+SR++LF   D LEEG LR SSS    E DND+AL +L+DRVS LKR+TGDIHEEVE+HN LLD++GN MD++RGIMS T++RFK+VFE+K+  ++
Subjt:  REHRSSRSALF---DDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRT

Query:  CRLAVYFVLSFLLLFYLIR
        C+L  YFVL FL+++YLIR
Subjt:  CRLAVYFVLSFLLLFYLIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTTTGTTCATAGGGAGCACCGTTCTTCCAGATCTGCTCTCTTTGATGACCTTGAGGAGGGTGGTCTCAGGACAAGCTCTTCTGTCGAAATTAAAGAGCATGACAATGA
CAAAGCTCTCCATTCTTTGGAAGATAGAGTTTCTATTCTGAAGAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGCCATAATAATTTACTTGACCGAATGGGAAATG
GAATGGATGCTTCAAGAGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTCGAGCAAAAAACAAAGTGGAGAACTTGTAGACTTGCAGTGTATTTTGTGTTG
TCCTTCTTACTTCTTTTCTACCTCATCAGG
mRNA sequenceShow/hide mRNA sequence
GTTTTTGTTCATAGGGAGCACCGTTCTTCCAGATCTGCTCTCTTTGATGACCTTGAGGAGGGTGGTCTCAGGACAAGCTCTTCTGTCGAAATTAAAGAGCATGACAATGA
CAAAGCTCTCCATTCTTTGGAAGATAGAGTTTCTATTCTGAAGAGGTTGACAGGTGACATTCACGAAGAAGTGGAGAGCCATAATAATTTACTTGACCGAATGGGAAATG
GAATGGATGCTTCAAGAGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTCGAGCAAAAAACAAAGTGGAGAACTTGTAGACTTGCAGTGTATTTTGTGTTG
TCCTTCTTACTTCTTTTCTACCTCATCAGG
Protein sequenceShow/hide protein sequence
VFVHREHRSSRSALFDDLEEGGLRTSSSVEIKEHDNDKALHSLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDASRGIMSRTMDRFKMVFEQKTKWRTCRLAVYFVL
SFLLLFYLIR