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MS007698 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007698
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHR-like lesion-inducing protein-related
Genome locationscaffold13:566151..568226
RNA-Seq ExpressionMS007698
SyntenyMS007698
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031011 - Ino80 complex (cellular component)
InterPro domainsIPR008637 - HR-like lesion-inducer


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138701.1 uncharacterized protein LOC111009799 [Momordica charantia]1.0e-78100Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

XP_022958789.1 uncharacterized protein LOC111459955 [Cucurbita moschata]5.0e-7392.36Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+   RRNVS+ FGF LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGR+KSQFSIL+NDFLLHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

XP_023006758.1 uncharacterized protein LOC111499395 [Cucurbita maxima]1.3e-7392.99Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PKL   RRNVS+ FGF+LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGR+KSQFSIL+NDFLLHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

XP_023547571.1 uncharacterized protein LOC111806468 [Cucurbita pepo subsp. pepo]2.2e-7392.36Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+   RRNVS+ FGF+LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGR+KSQFSIL+NDFLLHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

XP_038906663.1 uncharacterized protein LOC120092598 isoform X2 [Benincasa hispida]4.5e-7492.99Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLN FRRNVS+ FGF+LPV+D+SH VAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDF+NYGREKSQFS LLNDF+LHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

TrEMBL top hitse value%identityAlignment
A0A0A0LNP8 Uncharacterized protein5.1e-7189.17Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKELLPKLN FRRN S+ FGF+LP ID++HLVAAFLSLKGIGGLLFVFGSPIGAYLLL+YLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGRE SQF IL+NDF+LHVALAGALLFFIGTKNSI R+QQKK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

A0A1S3CE23 uncharacterized protein LOC1034994054.6e-7291.08Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGG AAKELLPKLN FRRN S+ FGF+LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGRE SQF IL+NDF+LHVALAGALLFFIGTKNSI R+QQKK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

A0A6J1CAG6 uncharacterized protein LOC1110097995.0e-79100Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

A0A6J1H651 uncharacterized protein LOC1114599552.4e-7392.36Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PK+   RRNVS+ FGF LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGR+KSQFSIL+NDFLLHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

A0A6J1L5U1 uncharacterized protein LOC1114993956.4e-7492.99Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKEL+PKL   RRNVS+ FGF+LPVID+SHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN
        ILYDFFNYGR+KSQFSIL+NDFLLHVALAGALLFFIGTKNSISRRQQKK+AHKAKTN
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04340.1 HR-like lesion-inducing protein-related3.7e-5065.61Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFN+FGTDGGPAAKEL PKL+  + ++SSI G +LP +++  +V A ++LKG+GGLLFV G+  GAYLL +YL + +P
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSI--SRRQQKKRAHKAK
        ILYDF+NYG E  QFS+LL +FL  VAL GALLFFIG KNS   S+R  KKR  K K
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSI--SRRQQKKRAHKAK

AT3G23180.1 HR-like lesion-inducing protein-related4.5e-1133.04Show/hide
Query:  LGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFF
        +GR LFAS F LS+W  + E   +         PK           FG++     I HL+   + ++ +GGL+F++GS  GA+LLL+Y  I+T + +DF+
Subjt:  LGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFF

Query:  NYGREKSQFSIL
        N+  +  +F +L
Subjt:  NYGREKSQFSIL

AT3G23190.1 HR-like lesion-inducing protein-related2.3e-1540Show/hide
Query:  GRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFN
        GRV+FAS F++SAW+ +  FG     AA EL PKL  F     +I             VA  + +K +GG+LF+F + +GA LLL+Y AI +PILYDF+N
Subjt:  GRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFN

Query:  YGREKSQFSILLNDF
           ++  F++    F
Subjt:  YGREKSQFSILLNDF

AT4G14420.1 HR-like lesion-inducing protein-related1.7e-4258.23Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        M   SFLGR LF S+F+LSAWQ FN+FG DGG +AK L PK NAF  +V++  G  LP +D+  LVAA ++LKGIGGLLFVFGS +GAYLLLL+ A++TP
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISR-RQQKKRAHKAKTN
        ILYDF+NY  ++ +F  L + F   +AL G LLFFIG KNS    RQ +K+A KAK N
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSISR-RQQKKRAHKAKTN

AT5G43460.1 HR-like lesion-inducing protein-related1.0e-4461.54Show/hide
Query:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP
        MGFFSFLGRVLFASLFILSAWQMFN    DGGPAAKEL PKL+  + ++SS  G  LP I++  +VA  ++LKG+GGLLFV G+  GAYLL  YL +  P
Subjt:  MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTP

Query:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSI-SRRQQKKRAHKAK
        ILYDF+NYG ++  FS+LL +FL  VAL GALLFFIG KNS  +++  KKR  K K
Subjt:  ILYDFFNYGREKSQFSILLNDFLLHVALAGALLFFIGTKNSI-SRRQQKKRAHKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTCTTCTCTTTCCTTGGACGGGTTCTCTTTGCCTCCCTTTTCATCCTCTCCGCTTGGCAAATGTTCAACGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGA
ATTGCTGCCGAAGTTGAACGCTTTCAGGAGAAACGTCTCCTCCATATTTGGATTCAACCTACCTGTTATCGATATTTCCCATTTAGTTGCTGCATTTCTGTCTCTTAAAG
GCATAGGTGGCCTTCTCTTTGTATTTGGGAGCCCAATCGGAGCTTATCTTCTGCTTCTCTACTTGGCAATTAGCACCCCTATTTTATATGATTTCTTCAACTACGGTCGT
GAGAAGTCCCAATTCAGCATACTATTGAATGATTTCTTACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGGACGAAGAACTCCATTTCGAGGAGGCAGCA
GAAGAAGAGAGCACACAAAGCCAAAACAAAC
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTCTTCTCTTTCCTTGGACGGGTTCTCTTTGCCTCCCTTTTCATCCTCTCCGCTTGGCAAATGTTCAACGAATTTGGCACTGATGGTGGACCTGCTGCAAAGGA
ATTGCTGCCGAAGTTGAACGCTTTCAGGAGAAACGTCTCCTCCATATTTGGATTCAACCTACCTGTTATCGATATTTCCCATTTAGTTGCTGCATTTCTGTCTCTTAAAG
GCATAGGTGGCCTTCTCTTTGTATTTGGGAGCCCAATCGGAGCTTATCTTCTGCTTCTCTACTTGGCAATTAGCACCCCTATTTTATATGATTTCTTCAACTACGGTCGT
GAGAAGTCCCAATTCAGCATACTATTGAATGATTTCTTACTGCACGTGGCACTTGCTGGTGCATTGCTCTTCTTCATCGGGACGAAGAACTCCATTTCGAGGAGGCAGCA
GAAGAAGAGAGCACACAAAGCCAAAACAAAC
Protein sequenceShow/hide protein sequence
MGFFSFLGRVLFASLFILSAWQMFNEFGTDGGPAAKELLPKLNAFRRNVSSIFGFNLPVIDISHLVAAFLSLKGIGGLLFVFGSPIGAYLLLLYLAISTPILYDFFNYGR
EKSQFSILLNDFLLHVALAGALLFFIGTKNSISRRQQKKRAHKAKTN