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MS007709 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007709
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionrepetitive proline-rich cell wall protein 3-like
Genome locationscaffold13:659337..659630
RNA-Seq ExpressionMS007709
SyntenyMS007709
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POE15980.1 hypothetical protein BV923_23575 [Pectobacterium odoriferum]4.6e-1666.02Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYK----KKPRYKYKPPYKRYPPYKK-PPYKKPPYHYKPP
        MFLKYFLLLLL VVLLTT+QAL+ P++S+QEVIP+TD++LP  TTTTT T+P   DEESK+YK    K+P YK +PPYK+YPPYKK PPYKK      PP
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYK----KKPRYKYKPPYKRYPPYKK-PPYKKPPYHYKPP

Query:  SSN
        SS+
Subjt:  SSN

WP_219729224.1 hypothetical protein, partial [Pectobacterium odoriferum]4.6e-1666.02Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYK----KKPRYKYKPPYKRYPPYKK-PPYKKPPYHYKPP
        MFLKYFLLLLL VVLLTT+QAL+ P++S+QEVIP+TD++LP  TTTTT T+P   DEESK+YK    K+P YK +PPYK+YPPYKK PPYKK      PP
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYK----KKPRYKYKPPYKRYPPYKK-PPYKKPPYHYKPP

Query:  SSN
        SS+
Subjt:  SSN

XP_004147144.2 repetitive proline-rich cell wall protein 3 [Cucumis sativus]1.2e-1160.58Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTD---QKLPSTTTTTTATEPESEDEESKYYKKKPRYK--YK-PPYKRYPPYKKPPYKKPPYHYKP
        MFLKYFLLLLL VVLLTT+QAL+ P+ S+QEVIP TD    KLP     TT T+P   +EESK+Y++   YK  YK PPYKRYPPYK    K+PPY   P
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTD---QKLPSTTTTTTATEPESEDEESKYYKKKPRYK--YK-PPYKRYPPYKKPPYKKPPYHYKP

Query:  PSSN
        PSS+
Subjt:  PSSN

XP_022930415.1 uncharacterized protein LOC111436870 [Cucurbita moschata]1.9e-1767.35Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKKPPYKKPPYHYKPPSSN
        MF+KYFLLLLL VVLLTT+QAL+ P++S+ EVIPV++QKLPSTT T   TEP SE EESK+Y+K+  YK  PPYKRYPPYK    K+PPY   PPSSN
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKKPPYKKPPYHYKPPSSN

XP_023513909.1 repetitive proline-rich cell wall protein 3-like [Cucurbita pepo subsp. pepo]2.2e-1868.37Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKKPPYKKPPYHYKPPSSN
        MF+KYFLLLLL VVLLTT+QAL+ P++S+ EVIPV++QKLPSTT T   TEP SE EESK+Y+K+P YK  PPYKRYPPYK    K+PPY   PPSSN
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKKPPYKKPPYHYKPPSSN

TrEMBL top hitse value%identityAlignment
A0A0A0LI79 Uncharacterized protein5.7e-1260.58Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTD---QKLPSTTTTTTATEPESEDEESKYYKKKPRYK--YK-PPYKRYPPYKKPPYKKPPYHYKP
        MFLKYFLLLLL VVLLTT+QAL+ P+ S+QEVIP TD    KLP     TT T+P   +EESK+Y++   YK  YK PPYKRYPPYK    K+PPY   P
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTD---QKLPSTTTTTTATEPESEDEESKYYKKKPRYK--YK-PPYKRYPPYKKPPYKKPPYHYKP

Query:  PSSN
        PSS+
Subjt:  PSSN

A0A0A0LNP2 Uncharacterized protein1.3e-0856.44Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYK--YK-PPYKRYPPYKKPPYKKPPYHYKPPSS
        MF KYFLLLLL VVLLTT+QAL+ P  S+QE IP TD  L      TT T+P   +EESK++++   YK  YK PPYK+YPPYK    K+PPY   PPSS
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYK--YK-PPYKRYPPYKKPPYKKPPYHYKPPSS

Query:  N
        +
Subjt:  N

A0A1S3CE34 repetitive proline-rich cell wall protein 3-like1.2e-0959Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKK-PPYKK-PPYHYKPPSSN
        MFLKYFLLLLL  VLL+T+QAL+ P+ S QEVIP TD  +   T  TT  +P   +EESK+Y++   + YK PYKR PPYKK PPYKK PPY   PPSS+
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKK-PPYKK-PPYHYKPPSSN

A0A5A7VEY7 Repetitive proline-rich cell wall protein 3-like1.2e-0959Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKK-PPYKK-PPYHYKPPSSN
        MFLKYFLLLLL  VLL+T+QAL+ P+ S QEVIP TD  +   T  TT  +P   +EESK+Y++   + YK PYKR PPYKK PPYKK PPY   PPSS+
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKK-PPYKK-PPYHYKPPSSN

A0A6J1EWV3 uncharacterized protein LOC1114368709.0e-1867.35Show/hide
Query:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKKPPYKKPPYHYKPPSSN
        MF+KYFLLLLL VVLLTT+QAL+ P++S+ EVIPV++QKLPSTT T   TEP SE EESK+Y+K+  YK  PPYKRYPPYK    K+PPY   PPSSN
Subjt:  MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKKPPYKKPPYHYKPPSSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTCAAATACTTCCTTCTGCTTCTTCTCGGAGTGGTGCTTCTCACCACCTCCCAAGCTCTGAGAATTCCGGCGGAGTCCAGCCAAGAAGTGATTCCGGTCACTGA
TCAGAAGCTTCCCTCTACCACCACCACCACCACTGCCACCGAGCCCGAGTCGGAGGACGAGGAGTCCAAGTACTATAAGAAGAAACCTCGCTACAAGTACAAGCCTCCCT
ATAAGAGGTACCCACCCTACAAAAAACCACCCTACAAAAAACCACCTTACCACTACAAGCCACCGTCCTCCAAC
mRNA sequenceShow/hide mRNA sequence
ATGTTTCTCAAATACTTCCTTCTGCTTCTTCTCGGAGTGGTGCTTCTCACCACCTCCCAAGCTCTGAGAATTCCGGCGGAGTCCAGCCAAGAAGTGATTCCGGTCACTGA
TCAGAAGCTTCCCTCTACCACCACCACCACCACTGCCACCGAGCCCGAGTCGGAGGACGAGGAGTCCAAGTACTATAAGAAGAAACCTCGCTACAAGTACAAGCCTCCCT
ATAAGAGGTACCCACCCTACAAAAAACCACCCTACAAAAAACCACCTTACCACTACAAGCCACCGTCCTCCAAC
Protein sequenceShow/hide protein sequence
MFLKYFLLLLLGVVLLTTSQALRIPAESSQEVIPVTDQKLPSTTTTTTATEPESEDEESKYYKKKPRYKYKPPYKRYPPYKKPPYKKPPYHYKPPSSN