; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007732 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007732
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglycine-rich cell wall structural protein-like isoform X2
Genome locationscaffold13:871316..871924
RNA-Seq ExpressionMS007732
SyntenyMS007732
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050716.1 hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa]6.6e-2571.73Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGF------GGGHGIGGGFGKGGGFG
        MASG KRV LLSLLCFHV+V +VVA+E  +G++EKFLF GKSGGLGGGFGGG G GGGFGGG GGGGG GGG GGGF      GGGHGIGGGFGKGGG G
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGF------GGGHGIGGGFGKGGGFG

Query:  GGAGGGFGK--------GVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGG------------GAGGGFGK-
        GG GGG G         G GGG+GGGAGGGFGKGGG+GGG G G G GGG+GGGIGKGGGLGGG GAGGGFGKGGG+GG            GAGGGFGK 
Subjt:  GGAGGGFGK--------GVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGG------------GAGGGFGK-

Query:  ---GGGIGKGGGLGGGAGGGFGK----GGGISKGGGL
           GGGIGKGGGLGGGAGGG GK    GGGI KGGGL
Subjt:  ---GGGIGKGGGLGGGAGGGFGK----GGGISKGGGL

XP_023006055.1 glycine-rich cell wall structural protein-like isoform X2 [Cucurbita maxima]1.4e-2777.42Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG
        MA+GC RV LLS LCF+V+V SVVA+EVG G +EKFLF GKSGGLG GFGGG G GGGFGGG GGGGG G G GGGFGGG GIG G G GGG GGG GGG
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG

Query:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGV--------GGGIGKGGGLGG--GGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGG
         G G GGG+GGGAGGGFGKGGG+GGGIGKGGGLGGGV        GGGIGKGGGLGG  GGG GGG GKGGG+GGGAGGGFGKGGGIGKGGGLGGGAGGG
Subjt:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGV--------GGGIGKGGGLGG--GGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGG

Query:  FGK----GGGISKGGGL
        FGK    GGG  KGGGL
Subjt:  FGK----GGGISKGGGL

XP_023006069.1 glycine-rich cell wall structural protein-like isoform X15 [Cucurbita maxima]5.9e-2670.42Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGG-------GGGGGGFGGGFGGGGGFGGGS--------GGGFGGGHGIGG
        MA+GC RV LLS LCF+V+V SVVA+EVG G +EKFLF GKSGGLG GFGGG       GGGGGG GGG GGGGGFGGGS        GGG GGG G G 
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGG-------GGGGGGFGGGFGGGGGFGGGS--------GGGFGGGHGIGG

Query:  GFGKGGGFGGGAGGGFGK--GVGGGV----------------GGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGGGA
        GFGKGGG GGGAGGGFGK  G+GGG+                GGGAGGG+GKGGG+GGGIGKGGGLGGGVGGG+  GGG+G GGG GGG GKGGG+GGGA
Subjt:  GFGKGGGFGGGAGGGFGK--GVGGGV----------------GGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGGGA

Query:  GGGFGK----GGGIGKGGGLGGGAGGGFGKGGGISKGGGL
        GGG+GK    GGGIGKGGGLGGGAGGGFGKGGGI KGGGL
Subjt:  GGGFGK----GGGIGKGGGLGGGAGGGFGKGGGISKGGGL

XP_023006070.1 glycine-rich cell wall structural protein-like isoform X16 [Cucurbita maxima]4.5e-2677.25Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG
        MA+GC RV LLS LCF+V+V SVVA+EVG G +EKFLF GKSGGLG GFGGG G GGGFGGG GGGGG G G GGGFGGG GIG G G GGG GGG GGG
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG

Query:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGL--GGGVGGGI--GKGGGLGGGGGAGGGFGKGGGVGGGAGGGFGK----GGGIGKGGGLGGGAGGGFG
         G G GGG+GGGAGGGFGKGGG+GGGIGKGGGL  GGG+GGG+  G GGG+G GGG GGG GKGGG+GGGAGGG+GK    GGGIGKGGGLGGGAGGGFG
Subjt:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGL--GGGVGGGI--GKGGGLGGGGGAGGGFGKGGGVGGGAGGGFGK----GGGIGKGGGLGGGAGGGFG

Query:  KGGGISKGGGL
        KGGGI KGGGL
Subjt:  KGGGISKGGGL

XP_023548149.1 glycine-rich cell wall structural protein-like isoform X3 [Cucurbita pepo subsp. pepo]3.5e-2669.64Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGG----------GFGKG
        MA+GC RV LLSL CF+V+V SVVA+EV  G +EKFLF GKSGGLG GFGGG G GGGFGGG GGGGG GGG GGGFGGG GIGG          GFGKG
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGG----------GFGKG

Query:  GGFGGGAGGGFGK--------------------GVGGGV--GGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGG----GGGAGGGFGKGGGVG
        GG GGGAGGGFGK                    GVGGG+  GGG GGG+GKGGG+GGGIGKGGGLGGG GGG GKGGGLGG    GGG GGG GKGGG+G
Subjt:  GGFGGGAGGGFGK--------------------GVGGGV--GGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGG----GGGAGGGFGKGGGVG

Query:  GGAGGGFGK----GGGIGKGGGLGGGAGGGFGK----GGGISKGGGL
        GGAGGGFGK    GGGIGKGGGLGGGAGGGFGK    GGGI KGGGL
Subjt:  GGAGGGFGK----GGGIGKGGGLGGGAGGGFGK----GGGISKGGGL

TrEMBL top hitse value%identityAlignment
A0A5D3BTN6 Uncharacterized protein3.2e-2571.73Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGF------GGGHGIGGGFGKGGGFG
        MASG KRV LLSLLCFHV+V +VVA+E  +G++EKFLF GKSGGLGGGFGGG G GGGFGGG GGGGG GGG GGGF      GGGHGIGGGFGKGGG G
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGF------GGGHGIGGGFGKGGGFG

Query:  GGAGGGFGK--------GVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGG------------GAGGGFGK-
        GG GGG G         G GGG+GGGAGGGFGKGGG+GGG G G G GGG+GGGIGKGGGLGGG GAGGGFGKGGG+GG            GAGGGFGK 
Subjt:  GGAGGGFGK--------GVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGG------------GAGGGFGK-

Query:  ---GGGIGKGGGLGGGAGGGFGK----GGGISKGGGL
           GGGIGKGGGLGGGAGGG GK    GGGI KGGGL
Subjt:  ---GGGIGKGGGLGGGAGGGFGK----GGGISKGGGL

A0A6J1KZ46 glycine-rich cell wall structural protein-like isoform X26.8e-2877.42Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG
        MA+GC RV LLS LCF+V+V SVVA+EVG G +EKFLF GKSGGLG GFGGG G GGGFGGG GGGGG G G GGGFGGG GIG G G GGG GGG GGG
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG

Query:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGV--------GGGIGKGGGLGG--GGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGG
         G G GGG+GGGAGGGFGKGGG+GGGIGKGGGLGGGV        GGGIGKGGGLGG  GGG GGG GKGGG+GGGAGGGFGKGGGIGKGGGLGGGAGGG
Subjt:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGV--------GGGIGKGGGLGG--GGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGG

Query:  FGK----GGGISKGGGL
        FGK    GGG  KGGGL
Subjt:  FGK----GGGISKGGGL

A0A6J1KZ60 glycine-rich cell wall structural protein-like isoform X162.2e-2677.25Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG
        MA+GC RV LLS LCF+V+V SVVA+EVG G +EKFLF GKSGGLG GFGGG G GGGFGGG GGGGG G G GGGFGGG GIG G G GGG GGG GGG
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG

Query:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGL--GGGVGGGI--GKGGGLGGGGGAGGGFGKGGGVGGGAGGGFGK----GGGIGKGGGLGGGAGGGFG
         G G GGG+GGGAGGGFGKGGG+GGGIGKGGGL  GGG+GGG+  G GGG+G GGG GGG GKGGG+GGGAGGG+GK    GGGIGKGGGLGGGAGGGFG
Subjt:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGL--GGGVGGGI--GKGGGLGGGGGAGGGFGKGGGVGGGAGGGFGK----GGGIGKGGGLGGGAGGGFG

Query:  KGGGISKGGGL
        KGGGI KGGGL
Subjt:  KGGGISKGGGL

A0A6J1L144 glycine-rich cell wall structural protein-like isoform X152.9e-2670.42Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGG-------GGGGGGFGGGFGGGGGFGGGS--------GGGFGGGHGIGG
        MA+GC RV LLS LCF+V+V SVVA+EVG G +EKFLF GKSGGLG GFGGG       GGGGGG GGG GGGGGFGGGS        GGG GGG G G 
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGG-------GGGGGGFGGGFGGGGGFGGGS--------GGGFGGGHGIGG

Query:  GFGKGGGFGGGAGGGFGK--GVGGGV----------------GGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGGGA
        GFGKGGG GGGAGGGFGK  G+GGG+                GGGAGGG+GKGGG+GGGIGKGGGLGGGVGGG+  GGG+G GGG GGG GKGGG+GGGA
Subjt:  GFGKGGGFGGGAGGGFGK--GVGGGV----------------GGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGGGA

Query:  GGGFGK----GGGIGKGGGLGGGAGGGFGKGGGISKGGGL
        GGG+GK    GGGIGKGGGLGGGAGGGFGKGGGI KGGGL
Subjt:  GGGFGK----GGGIGKGGGLGGGAGGGFGKGGGISKGGGL

A0A6J1L3V9 glycine-rich cell wall structural protein-like isoform X55.4e-2576.04Show/hide
Query:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG
        MA+GC RV LLS LCF+V+V SVVA+EVG G +EKFLF GKSGGLG GFGGG G GGGFGGG GGGGG G G GGGFGGG GIG G G GGG GGG GGG
Subjt:  MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGG

Query:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGV--------GGGIGKGGGLGG--GGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGG
         G G GGG+GGGAGGGFGKGGG+GGGIGKGGGLGGGV        GGGIGKGGGLGG  GGG GGG GKGGG+GGG G G G GGGIGKGGGLGGGAGGG
Subjt:  FGKGVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGV--------GGGIGKGGGLGG--GGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGG

Query:  FGK----GGGISKGGGL
        FGK    GGGI KGGGL
Subjt:  FGK----GGGISKGGGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23450.1 unknown protein2.3e-2073.63Show/hide
Query:  LLSLLCFHVVVLSVVAREVGEGRDEKFLFL---GKSGGLGGGFGGGGGG--GGGFGGGFGG--GGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGGFG
        LL+LLCFHV V++VVAR+V  GRDE    L   GK GG GGGFGGG GG  GGG GGGFGG  GGGFGGG GGG GGG G GGGFG GGGFGGG GGG G
Subjt:  LLSLLCFHVVVLSVVAREVGEGRDEKFLFL---GKSGGLGGGFGGGGGG--GGGFGGGFGG--GGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGGFG

Query:  KGVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGGFGKGGGISKGGG
         GVGGG GGG GGGFGKGGGIGGGIGKGGG+GGG+G G G GGG+G GGG GGG GKGGG+GGG G G G GGGIGKGGG+GGG G G G GGGI KGGG
Subjt:  KGVGGGVGGGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGGFGKGGGISKGGG

Query:  L
        +
Subjt:  L


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTGGCTGCAAGAGAGTGGGTTTGTTGTCTTTGTTGTGCTTTCATGTTGTTGTGTTGAGTGTGGTTGCAAGGGAAGTGGGTGAAGGGAGGGATGAGAAGTTTTT
GTTCTTGGGAAAGAGTGGTGGGCTAGGGGGTGGATTTGGTGGTGGTGGTGGAGGTGGAGGGGGATTTGGAGGTGGTTTTGGCGGTGGTGGTGGTTTTGGAGGTGGGAGTG
GTGGAGGATTTGGAGGGGGACATGGGATTGGTGGTGGGTTTGGTAAAGGGGGCGGCTTTGGTGGTGGAGCTGGTGGCGGATTTGGCAAAGGCGTTGGTGGTGGAGTAGGA
GGAGGTGCGGGCGGTGGTTTTGGTAAGGGCGGCGGTATTGGTGGTGGAATTGGAAAGGGCGGCGGACTAGGAGGTGGTGTAGGTGGTGGCATTGGAAAAGGTGGAGGACT
AGGTGGTGGTGGTGGAGCTGGAGGTGGGTTTGGCAAAGGTGGAGGCGTTGGAGGTGGTGCTGGAGGAGGGTTCGGCAAGGGTGGTGGTATCGGCAAGGGTGGTGGACTTG
GAGGTGGTGCTGGAGGAGGGTTCGGCAAGGGTGGTGGTATCAGCAAGGGTGGTGGACTT
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTGGCTGCAAGAGAGTGGGTTTGTTGTCTTTGTTGTGCTTTCATGTTGTTGTGTTGAGTGTGGTTGCAAGGGAAGTGGGTGAAGGGAGGGATGAGAAGTTTTT
GTTCTTGGGAAAGAGTGGTGGGCTAGGGGGTGGATTTGGTGGTGGTGGTGGAGGTGGAGGGGGATTTGGAGGTGGTTTTGGCGGTGGTGGTGGTTTTGGAGGTGGGAGTG
GTGGAGGATTTGGAGGGGGACATGGGATTGGTGGTGGGTTTGGTAAAGGGGGCGGCTTTGGTGGTGGAGCTGGTGGCGGATTTGGCAAAGGCGTTGGTGGTGGAGTAGGA
GGAGGTGCGGGCGGTGGTTTTGGTAAGGGCGGCGGTATTGGTGGTGGAATTGGAAAGGGCGGCGGACTAGGAGGTGGTGTAGGTGGTGGCATTGGAAAAGGTGGAGGACT
AGGTGGTGGTGGTGGAGCTGGAGGTGGGTTTGGCAAAGGTGGAGGCGTTGGAGGTGGTGCTGGAGGAGGGTTCGGCAAGGGTGGTGGTATCGGCAAGGGTGGTGGACTTG
GAGGTGGTGCTGGAGGAGGGTTCGGCAAGGGTGGTGGTATCAGCAAGGGTGGTGGACTT
Protein sequenceShow/hide protein sequence
MASGCKRVGLLSLLCFHVVVLSVVAREVGEGRDEKFLFLGKSGGLGGGFGGGGGGGGGFGGGFGGGGGFGGGSGGGFGGGHGIGGGFGKGGGFGGGAGGGFGKGVGGGVG
GGAGGGFGKGGGIGGGIGKGGGLGGGVGGGIGKGGGLGGGGGAGGGFGKGGGVGGGAGGGFGKGGGIGKGGGLGGGAGGGFGKGGGISKGGGL