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MS007743 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007743
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionActin-related protein 2/3 complex subunit 2
Genome locationscaffold13:964852..965068
RNA-Seq ExpressionMS007743
SyntenyMS007743
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3457847.1 hypothetical protein FNV43_RR02507 [Rhamnella rubrinervis]1.7e-1561.97Show/hide
Query:  DVNGCK-RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR
        D NGCK +  GSV S ++  H NGD + ES +LLPPRRGG+S+K DK  RKVQWND NG KL EV+ FEPR
Subjt:  DVNGCK-RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR

QCE05119.1 hypothetical protein DEO72_LG9g119 [Vigna unguiculata]9.8e-1658.97Show/hide
Query:  AKDVNGC--KRH----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR
        +KD NGC   +H      S+ SEKVEDHVNGD + +S +LLPPRRGG+S+  DK  RKVQWND NG KL EV+ +EPR
Subjt:  AKDVNGC--KRH----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR

TKY53682.1 hypothetical protein E2542_SST25223 [Spatholobus suberectus]4.4e-1658.97Show/hide
Query:  AKDVNGC--KRH----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR
        +KDVNGC   +H      S+G EKVEDHVNG+ + +S +LLPPRRGG+S+  DK  RKVQWND NG KL EV+ +EPR
Subjt:  AKDVNGC--KRH----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR

XP_007145827.1 hypothetical protein PHAVU_007G271300g [Phaseolus vulgaris]9.8e-1658.97Show/hide
Query:  AKDVNGC--KRH-----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEP
        +KDVNGC   +H       ++GSEKVEDHVNGD   +S +LLPPRRGG+S+  DK  RKVQWND NG KL EV+ +EP
Subjt:  AKDVNGC--KRH-----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEP

XP_022138680.1 uncharacterized protein LOC111009782 [Momordica charantia]2.8e-2698.39Show/hide
Query:  RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFE
        RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKP RKVQWNDNNGRKLTEVMVFE
Subjt:  RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFE

TrEMBL top hitse value%identityAlignment
A0A0L9TUB1 Uncharacterized protein1.1e-1558.97Show/hide
Query:  AKDVNGC--KRH----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR
        +KDVNGC   +H      S+ SEKVEDHVNGD + +S +LLPPRRGG+S+  DK  R VQWND NG KL EV+ +EPR
Subjt:  AKDVNGC--KRH----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR

A0A151SPA6 Uncharacterized protein8.1e-1659.74Show/hide
Query:  AKDVNG-----CKRHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR
        +KDVNG      K    S+G EKVEDHVNG+ + +S ALLPPRRGG+S+  DK  RKVQWND NG KL EV+ +EPR
Subjt:  AKDVNG-----CKRHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR

A0A4D6MYB4 Uncharacterized protein4.8e-1658.97Show/hide
Query:  AKDVNGC--KRH----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR
        +KD NGC   +H      S+ SEKVEDHVNGD + +S +LLPPRRGG+S+  DK  RKVQWND NG KL EV+ +EPR
Subjt:  AKDVNGC--KRH----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR

A0A6J1CA45 uncharacterized protein LOC1110097821.3e-2698.39Show/hide
Query:  RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFE
        RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKP RKVQWNDNNGRKLTEVMVFE
Subjt:  RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFE

V7BMK7 Uncharacterized protein4.8e-1658.97Show/hide
Query:  AKDVNGC--KRH-----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEP
        +KDVNGC   +H       ++GSEKVEDHVNGD   +S +LLPPRRGG+S+  DK  RKVQWND NG KL EV+ +EP
Subjt:  AKDVNGC--KRH-----FGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33390.1 unknown protein6.3e-1346.48Show/hide
Query:  KDVNGCK-RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEP
        K+ NGC+ +   S+ S ++ED +  +   ES  LLPPR+GG+S+  DK  R VQWND  G  L EV+V+EP
Subjt:  KDVNGCK-RHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCAAAGACGTTAATGGCTGTAAAAGACATTTTGGTTCTGTAGGCTCCGAGAAGGTTGAGGATCATGTTAATGGGGACAGCAACGTTGAATCAATGGCATTATTGCCACC
TCGAAGAGGTGGGATTTCAAAGAAACTGGATAAACCGAGCCGAAAAGTGCAGTGGAATGATAACAATGGACGTAAGTTGACGGAGGTAATGGTATTCGAACCAAGG
mRNA sequenceShow/hide mRNA sequence
GCCAAAGACGTTAATGGCTGTAAAAGACATTTTGGTTCTGTAGGCTCCGAGAAGGTTGAGGATCATGTTAATGGGGACAGCAACGTTGAATCAATGGCATTATTGCCACC
TCGAAGAGGTGGGATTTCAAAGAAACTGGATAAACCGAGCCGAAAAGTGCAGTGGAATGATAACAATGGACGTAAGTTGACGGAGGTAATGGTATTCGAACCAAGG
Protein sequenceShow/hide protein sequence
AKDVNGCKRHFGSVGSEKVEDHVNGDSNVESMALLPPRRGGISKKLDKPSRKVQWNDNNGRKLTEVMVFEPR