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MS007768 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007768
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B
Genome locationscaffold13:1116956..1119760
RNA-Seq ExpressionMS007768
SyntenyMS007768
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR009346 - GRIM-19


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147172.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis sativus]9.8e-7698.6Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

XP_008460702.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucumis melo]4.9e-7597.9Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGF PVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

XP_022138706.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Momordica charantia]8.9e-77100Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

XP_022959289.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita moschata]2.2e-7597.9Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

XP_023000560.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B [Cucurbita maxima]2.2e-7597.9Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

TrEMBL top hitse value%identityAlignment
A0A0A0LLE8 Uncharacterized protein4.8e-7698.6Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

A0A1S3CD20 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B2.4e-7597.9Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGF PVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

A0A6J1CAH0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B4.3e-77100Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

A0A6J1H7M2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B1.1e-7597.9Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGE+VYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

A0A6J1KIP8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B1.1e-7597.9Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFG FSWGMYQVGKGNKIRRALKEEKY+ARRAILPVLQAEEDERFVKE
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRP+VW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

SwissProt top hitse value%identityAlignment
O49313 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B1.2e-7188.81Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEA IRKKPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMAIFLT  G F+WGMYQVG+GNKIRRALKEEKYAARRAILP+LQAEEDERFV E
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WK YLEYEA+VMKDVPGWKVGE+VYNSG+WMPPATGELRPDVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

Q0MQ89 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 132.8e-2546.22Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PPPGG+ P+ Y R +P +G S  ++     GT  +G + + K N+ RR L+ E + AR A+LP+LQAE D R ++  +  LE EA +MKDVP WK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGESVYNSGKWMPPATGEL
        VGESV+++ +W+PP  GEL
Subjt:  VGESVYNSGKWMPPATGEL

Q0MQ90 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 132.8e-2546.22Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PPPGG+ P+ Y R +P +G S  ++     GT  +G + + K N+ RR L+ E + AR A+LP+LQAE D R ++  +  LE EA +MKDVP WK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGESVYNSGKWMPPATGEL
        VGESV+++ +W+PP  GEL
Subjt:  VGESVYNSGKWMPPATGEL

Q8RWA7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A1.1e-6986.01Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEA IR KPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMA+FL   G F+WGMYQVG+GNKIRRALKEEKYAARR ILP+LQAEEDERFV E
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WK YLEYEA+VMKDVPGWKVGE+VYNSG+WMPPATGELRPDVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

Q9P0J0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 132.8e-2546.22Show/hide
Query:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK
        + QD PPPGG+ P+ Y R +P +G S  ++     GT  +G + + K N+ RR L+ E + AR A+LP+LQAE D R ++  +  LE EA +MKDVP WK
Subjt:  ILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAEVMKDVPGWK

Query:  VGESVYNSGKWMPPATGEL
        VGESV+++ +W+PP  GEL
Subjt:  VGESVYNSGKWMPPATGEL

Arabidopsis top hitse value%identityAlignment
AT1G04630.1 GRIM-19 protein7.8e-7186.01Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEA IR KPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMA+FL   G F+WGMYQVG+GNKIRRALKEEKYAARR ILP+LQAEEDERFV E
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WK YLEYEA+VMKDVPGWKVGE+VYNSG+WMPPATGELRPDVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW

AT2G33220.1 GRIM-19 protein8.3e-7388.81Show/hide
Query:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE
        MTEA IRKKPGMASVKDMP+LQDGPPPGGFAPVRYARRI   GPSAMAIFLT  G F+WGMYQVG+GNKIRRALKEEKYAARRAILP+LQAEEDERFV E
Subjt:  MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKE

Query:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW
        WK YLEYEA+VMKDVPGWKVGE+VYNSG+WMPPATGELRPDVW
Subjt:  WKSYLEYEAEVMKDVPGWKVGESVYNSGKWMPPATGELRPDVW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGAGGCCGCAATTCGGAAGAAGCCTGGCATGGCCAGCGTCAAAGATATGCCGATCCTCCAAGACGGGCCTCCACCGGGTGGATTCGCTCCGGTCCGATACGCCCG
CCGGATTCCCACCAAAGGCCCCAGCGCCATGGCCATTTTCCTTACTGCTTTCGGCACTTTCTCTTGGGGCATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGGCCC
TGAAGGAAGAAAAATATGCAGCCCGTCGTGCAATATTGCCTGTACTTCAAGCTGAGGAAGATGAAAGATTTGTCAAAGAGTGGAAGAGCTACCTTGAATACGAGGCTGAA
GTTATGAAGGATGTACCTGGTTGGAAAGTTGGTGAAAGCGTCTACAACTCAGGGAAATGGATGCCTCCAGCAACCGGTGAGCTACGACCCGATGTCTGG
mRNA sequenceShow/hide mRNA sequence
ATGACGGAGGCCGCAATTCGGAAGAAGCCTGGCATGGCCAGCGTCAAAGATATGCCGATCCTCCAAGACGGGCCTCCACCGGGTGGATTCGCTCCGGTCCGATACGCCCG
CCGGATTCCCACCAAAGGCCCCAGCGCCATGGCCATTTTCCTTACTGCTTTCGGCACTTTCTCTTGGGGCATGTATCAGGTCGGCAAGGGCAACAAGATCCGAAGGGCCC
TGAAGGAAGAAAAATATGCAGCCCGTCGTGCAATATTGCCTGTACTTCAAGCTGAGGAAGATGAAAGATTTGTCAAAGAGTGGAAGAGCTACCTTGAATACGAGGCTGAA
GTTATGAAGGATGTACCTGGTTGGAAAGTTGGTGAAAGCGTCTACAACTCAGGGAAATGGATGCCTCCAGCAACCGGTGAGCTACGACCCGATGTCTGG
Protein sequenceShow/hide protein sequence
MTEAAIRKKPGMASVKDMPILQDGPPPGGFAPVRYARRIPTKGPSAMAIFLTAFGTFSWGMYQVGKGNKIRRALKEEKYAARRAILPVLQAEEDERFVKEWKSYLEYEAE
VMKDVPGWKVGESVYNSGKWMPPATGELRPDVW