; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007776 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007776
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold13:1176344..1176748
RNA-Seq ExpressionMS007776
SyntenyMS007776
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68820.1 hypothetical protein VITISV_009132 [Vitis vinifera]7.0e-0734.97Show/hide
Query:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFSFVVGGR--------IRLLTLVRSFKSLSGLSINR
        +   +K  V   RG R G P S FLF +V D+LS LL R   T L EGF +G+D+ ++ LL      ++  +        ++++ LV  F  +SGL IN 
Subjt:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFSFVVGGR--------IRLLTLVRSFKSLSGLSINR

Query:  EKYQVAVAGINCEPSKLGRCLSGPKIWYLAV-----TYLGLPL
        EK    ++GIN     L    S   ++Y  V     +YLGLPL
Subjt:  EKYQVAVAGINCEPSKLGRCLSGPKIWYLAV-----TYLGLPL

TYK31266.1 hypothetical protein E5676_scaffold455G005560 [Cucumis melo var. makuwa]6.3e-0833.33Show/hide
Query:  NFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL------LIPFSFVVGGRIRLLTLVRSFKSLSGLSIN
        + ++  K + ++   RG R G PFS FLF++V ++L  ++++       EGF +GKD   L LL      L+   + V   ++L   +R F+  SG  +N
Subjt:  NFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL------LIPFSFVVGGRIRLLTLVRSFKSLSGLSIN

Query:  REKYQVAVAGINCEPSKLGRC--LSGPKIWYLAVTYLGLPL
         EK   A++G+N E   L +   L G K+  L + YLGLPL
Subjt:  REKYQVAVAGINCEPSKLGRC--LSGPKIWYLAVTYLGLPL

XP_028121753.1 uncharacterized protein LOC114318966 [Camellia sinensis]3.1e-0734.06Show/hide
Query:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL-----LIPFSFVVGGRIR-LLTLVRSFKSLSGLSINREK
        +  K++      RG R G P S FLFI+V D+L  ++D      ++EGF +G+D+ ++  L      I FS     ++  LL ++R F+ +SGL +N  K
Subjt:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL-----LIPFSFVVGGRIR-LLTLVRSFKSLSGLSINREK

Query:  YQVAVAGINCEPSKLGRC--LSGPKIWYLAVTYLGLPL
           +V GIN   S + R   + G  I    + YLGLPL
Subjt:  YQVAVAGINCEPSKLGRC--LSGPKIWYLAVTYLGLPL

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]1.2e-0632.14Show/hide
Query:  NFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL-----LIPFSFVVGGRIRLLTLVRSFKSLSGLSINR
        + ++  + + ++   RG R G PFS FLF++V ++LSGL+ R       EGF +GKDK  + ++      + F       I  L  +  F+  S   +N 
Subjt:  NFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL-----LIPFSFVVGGRIRLLTLVRSFKSLSGLSINR

Query:  EKYQVAVAGINCEPSKLGRCLS--GPKIWYLAVTYLGLPL
        EK   A+ GIN E +K+    +    K+ +L + YLGLPL
Subjt:  EKYQVAVAGINCEPSKLGRCLS--GPKIWYLAVTYLGLPL

XP_038889274.1 uncharacterized protein LOC120079176 [Benincasa hispida]1.8e-0733.09Show/hide
Query:  WLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFSFVVGGR------IRLLTLVRSFKSLSGLSINRE
        ++  + + +V   RG R G P S  LF++V ++LS L+++ +   L+EGF +GKDK Q+ +L    S ++  +       +L   V  FK  SG  +N E
Subjt:  WLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFSFVVGGR------IRLLTLVRSFKSLSGLSINRE

Query:  KYQVAVAGINCEPSKLGRCLS--GPKIWYLAVTYLGLPL
        K   A+ GIN + ++L    +    K  +L  +YLGLPL
Subjt:  KYQVAVAGINCEPSKLGRCLS--GPKIWYLAVTYLGLPL

TrEMBL top hitse value%identityAlignment
A0A5D3E6J9 Reverse transcriptase domain-containing protein3.1e-0833.33Show/hide
Query:  NFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL------LIPFSFVVGGRIRLLTLVRSFKSLSGLSIN
        + ++  K + ++   RG R G PFS FLF++V ++L  ++++       EGF +GKD   L LL      L+   + V   ++L   +R F+  SG  +N
Subjt:  NFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL------LIPFSFVVGGRIRLLTLVRSFKSLSGLSIN

Query:  REKYQVAVAGINCEPSKLGRC--LSGPKIWYLAVTYLGLPL
         EK   A++G+N E   L +   L G K+  L + YLGLPL
Subjt:  REKYQVAVAGINCEPSKLGRC--LSGPKIWYLAVTYLGLPL

A0A803QEA6 Uncharacterized protein6.8e-0830.43Show/hide
Query:  NFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFS--FVVGGRI---RLLTLVRSFKSLSGLSINR
        + ++  + + K  G RG R G P S FLF ++ D+L  ++D+ + T  + GF +GKD  +L  L       F V   +   +L+ +V++F  +SGL +N 
Subjt:  NFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFS--FVVGGRI---RLLTLVRSFKSLSGLSINR

Query:  EKYQVAVAGINCEPSKLGRCLSGPKIWYLAVTYLGLPL
         K Q+    +N E       L G ++    +TYLG+ L
Subjt:  EKYQVAVAGINCEPSKLGRCLSGPKIWYLAVTYLGLPL

A0A803QI00 Uncharacterized protein5.8e-0730.37Show/hide
Query:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL-----LIPFSFVVGGRIRLLTLVRSFKSLSGLSINREKY
        +  + + K  G RG R G P S FLF +V+D+L  L+D+   +    GF +GKD  Q+  L      + F        +L+ +V +F  +SGL +N  K 
Subjt:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLL-----LIPFSFVVGGRIRLLTLVRSFKSLSGLSINREKY

Query:  QVAVAGINCEPSKLGRCLSGPKIWYLAVTYLGLPL
        Q+    +  E       + G ++    +TYLG+PL
Subjt:  QVAVAGINCEPSKLGRCLSGPKIWYLAVTYLGLPL

A5C9Z3 Reverse transcriptase domain-containing protein3.4e-0734.97Show/hide
Query:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFSFVVGGR--------IRLLTLVRSFKSLSGLSINR
        +   +K  V   RG R G P S FLF +V D+LS LL R   T L EGF +G+D+ ++ LL      ++  +        ++++ LV  F  +SGL IN 
Subjt:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFSFVVGGR--------IRLLTLVRSFKSLSGLSINR

Query:  EKYQVAVAGINCEPSKLGRCLSGPKIWYLAV-----TYLGLPL
        EK    ++GIN     L    S   ++Y  V     +YLGLPL
Subjt:  EKYQVAVAGINCEPSKLGRCLSGPKIWYLAV-----TYLGLPL

M5WZA0 Reverse transcriptase domain-containing protein (Fragment)4.4e-0732.61Show/hide
Query:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFS--FVVGGR----IRLLTLVRSFKSLSGLSINREK
        +  K + K    RG R G P SLFLF +V D+LS +++R     LV G   G D+ ++  L       F++ G+    + LL L++ F  +SG+ IN+ K
Subjt:  LESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFS--FVVGGR----IRLLTLVRSFKSLSGLSINREK

Query:  YQVAVAGINCEPSKLGRCLS--GPKIWYLAVTYLGLPL
            + GIN     L       G ++    + YLGLPL
Subjt:  YQVAVAGINCEPSKLGRCLS--GPKIWYLAVTYLGLPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAAATAATTTTTGGCTTGAATCTAAATCTAAACGGAAGGTCTTTGGCTTTAGGGGGCATAGACACGGCAGTCCCTTTTCCCTGTTCCTTTTCATAGTGGTTATGGACAT
TCTTAGCGGACTTTTGGATAGAGGTTTGGGTACAAGATTAGTGGAAGGTTTCGGTATGGGAAAGGATAAATTTCAACTCGGTTTGCTACTGATACCATTTTCTTTTGTAG
TAGGAGGGAGGATCCGTTTGTTAACCTTGGTAAGATCCTTCAAGTCTTTGAGTGGTCTTAGTATAAATAGGGAAAAATATCAAGTGGCTGTGGCCGGTATCAATTGTGAG
CCTAGTAAGCTTGGAAGATGCTTGTCTGGTCCTAAGATATGGTATCTAGCGGTGACTTATTTAGGACTTCCACTG
mRNA sequenceShow/hide mRNA sequence
GCAAATAATTTTTGGCTTGAATCTAAATCTAAACGGAAGGTCTTTGGCTTTAGGGGGCATAGACACGGCAGTCCCTTTTCCCTGTTCCTTTTCATAGTGGTTATGGACAT
TCTTAGCGGACTTTTGGATAGAGGTTTGGGTACAAGATTAGTGGAAGGTTTCGGTATGGGAAAGGATAAATTTCAACTCGGTTTGCTACTGATACCATTTTCTTTTGTAG
TAGGAGGGAGGATCCGTTTGTTAACCTTGGTAAGATCCTTCAAGTCTTTGAGTGGTCTTAGTATAAATAGGGAAAAATATCAAGTGGCTGTGGCCGGTATCAATTGTGAG
CCTAGTAAGCTTGGAAGATGCTTGTCTGGTCCTAAGATATGGTATCTAGCGGTGACTTATTTAGGACTTCCACTG
Protein sequenceShow/hide protein sequence
ANNFWLESKSKRKVFGFRGHRHGSPFSLFLFIVVMDILSGLLDRGLGTRLVEGFGMGKDKFQLGLLLIPFSFVVGGRIRLLTLVRSFKSLSGLSINREKYQVAVAGINCE
PSKLGRCLSGPKIWYLAVTYLGLPL