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MS007781 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007781
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationscaffold13:1215538..1215834
RNA-Seq ExpressionMS007781
SyntenyMS007781
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]2.6e-2768.82Show/hide
Query:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        LLLPIS LHATDELIS   + TV IVNE+   PLLG+HCRSK+DD GV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD
Subjt:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]2.6e-2768.82Show/hide
Query:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        LLLPIS LHATDELIS   + TV IVNE+   PLLG+HCRSK+DD GV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD
Subjt:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

KAA0046083.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.1e-1764.2Show/hide
Query:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGE
        LLLPIS L A DELIS   + TV IVNE+   PLLG+H R K+DD GV+++ +DKSYSF F+ NIW TTLFYC FEWVK E
Subjt:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGE

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.1e-2568.82Show/hide
Query:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        LLLPIS L ATDELIS   + TV IVNE+   PLLG+HCRSK+DD GV+++  DKSYSF F  NIW TTLFYC FEWVKG+ H FTIYD+KRD
Subjt:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]3.9e-2365.85Show/hide
Query:  DELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        +ELIS   + TV IVNE+   PLLG+HCRSK+DD GV+++ +DKSYSF F+ NIW TTLFYC FEWVKG+ H FTIYD+KRD
Subjt:  DELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

TrEMBL top hitse value%identityAlignment
A0A5A7TR91 S-protein homolog5.3e-1864.2Show/hide
Query:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGE
        LLLPIS L A DELIS   + TV IVNE+   PLLG+H R K+DD GV+++ +DKSYSF F+ NIW TTLFYC FEWVK E
Subjt:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGE

A0A5A7TT98 S-protein homolog1.9e-2365.85Show/hide
Query:  DELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        +ELIS   + TV IVNE+   PLLG+HCRSK+DD GV+++ +DKSYSF F+ NIW TTLFYC FEWVKG+ H FTIYD+KRD
Subjt:  DELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

A0A5A7TXE8 S-protein homolog5.3e-2668.82Show/hide
Query:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        LLLPIS L ATDELIS   + TV IVNE+   PLLG+HCRSK+DD GV+++  DKSYSF F  NIW TTLFYC FEWVKG+ H FTIYD+KRD
Subjt:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

B0F817 S-protein homolog1.3e-2768.82Show/hide
Query:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        LLLPIS LHATDELIS   + TV IVNE+   PLLG+HCRSK+DD GV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD
Subjt:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

B0F818 S-protein homolog1.3e-2768.82Show/hide
Query:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        LLLPIS LHATDELIS   + TV IVNE+   PLLG+HCRSK+DD GV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD
Subjt:  LLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

SwissProt top hitse value%identityAlignment
B3H730 S-protein homolog 181.7e-0836.25Show/hide
Query:  LISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        L    + + V I+N++     LG+HC+SK  D G   +   + + FT   N+WETTLF+C F W + +   F I   KRD
Subjt:  LISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

F4JLQ5 S-protein homolog 21.3e-0838.64Show/hide
Query:  SDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        +D  +T+ +  T K+ TV I N+L     L  HC+SK+DD G   ++  +S+SF+F    +  TL++CSF W   E H F IY   RD
Subjt:  SDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

F4JZG1 S-protein homolog 45.3e-0743.04Show/hide
Query:  STPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWE-TTLFYCSFEWVKGEIHCFTIYDYKRD
        ST K V V I N L     L +HC+S +DD G+ I+  + S+SF F+ +I    TLF+C F W  G+   F IYD  RD
Subjt:  STPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWE-TTLFYCSFEWVKGEIHCFTIYDYKRD

O23020 S-protein homolog 52.9e-1341.89Show/hide
Query:  QVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        + TV+ +  L   P L +HC+SK+DD G+H++   + Y F F+ N+W++TLF+CSF+W   +   F IYD +RD
Subjt:  QVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

Q9FMQ4 S-protein homolog 32.0e-0946.15Show/hide
Query:  STPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        ST K V   I N L     L +HC+S +DD G+ I+  + S+SF F+T+I  TTLFYC F W  G+   F IYD  RD
Subjt:  STPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.1e-1441.89Show/hide
Query:  QVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        + TV+ +  L   P L +HC+SK+DD G+H++   + Y F F+ N+W++TLF+CSF+W   +   F IYD +RD
Subjt:  QVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

AT3G54925.1 Plant self-incompatibility protein S1 family8.2e-1144.12Show/hide
Query:  VIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDY
        V+I N++    +L VHCRS EDDFG+  I  + ++ F+F  N W+TT F C F W  G  H F I  Y
Subjt:  VIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDY

AT3G55252.1 Plant self-incompatibility protein S1 family8.2e-1139.13Show/hide
Query:  LLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        LLP+S+ H             V+I N+L    +L VHCRS EDDFG+  I  + ++ F F  N ++TT F C F W  G  H F I+   RD
Subjt:  LLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD

AT5G04350.1 Plant self-incompatibility protein S1 family1.8e-1050Show/hide
Query:  VIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFE
        V++ N+L    LL VHCRSK+DD G HI++  + Y FTF  NIW+TT F C  +
Subjt:  VIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFE

AT5G12060.1 Plant self-incompatibility protein S1 family1.4e-1046.15Show/hide
Query:  STPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD
        ST K V   I N L     L +HC+S +DD G+ I+  + S+SF F+T+I  TTLFYC F W  G+   F IYD  RD
Subjt:  STPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCAAATATTACCGTTGTTGTTACCCATCAGCGACCTACATGCTACTGATGAATTGATCTCAACTCCAAAGCAAGTTACAGTGATCATCGTTAACGAGTTGGCTCT
TATTCCACTATTGGGCGTTCACTGTAGATCCAAAGAAGACGATTTTGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAGA
CAACACTATTTTACTGTAGCTTCGAATGGGTGAAAGGTGAAATCCACTGCTTTACTATTTATGACTACAAAAGAGAT
mRNA sequenceShow/hide mRNA sequence
ATGCTCCAAATATTACCGTTGTTGTTACCCATCAGCGACCTACATGCTACTGATGAATTGATCTCAACTCCAAAGCAAGTTACAGTGATCATCGTTAACGAGTTGGCTCT
TATTCCACTATTGGGCGTTCACTGTAGATCCAAAGAAGACGATTTTGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAGA
CAACACTATTTTACTGTAGCTTCGAATGGGTGAAAGGTGAAATCCACTGCTTTACTATTTATGACTACAAAAGAGAT
Protein sequenceShow/hide protein sequence
MLQILPLLLPISDLHATDELISTPKQVTVIIVNELALIPLLGVHCRSKEDDFGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHCFTIYDYKRD