; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007782 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007782
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationscaffold13:1218458..1218856
RNA-Seq ExpressionMS007782
SyntenyMS007782
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]1.0e-4264.84Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]1.0e-4264.84Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

EEF44294.1 conserved hypothetical protein [Ricinus communis]6.4e-2146.36Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDS
        K+ TVII N+L     L VHC+SKEDDLGVHI+    +Y F F+ N W  T F+C F W K  IH F IY   RD PK C++C+W++   GPC ++   +
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWDK
            CY W+K
Subjt:  PSLTCYPWDK

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]9.5e-4165.62Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISL ATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++  DKSYSF F  NIW TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWLIY SGPC QH    S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]3.8e-3762.93Show/hide
Query:  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC
        +ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NIW TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC
Subjt:  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC

Query:  YQHIDSPSLTCYPWDK
         QH ++ S+TC+PW+K
Subjt:  YQHIDSPSLTCYPWDK

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog1.8e-3762.93Show/hide
Query:  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC
        +ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NIW TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC
Subjt:  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC

Query:  YQHIDSPSLTCYPWDK
         QH ++ S+TC+PW+K
Subjt:  YQHIDSPSLTCYPWDK

A0A5A7TXE8 S-protein homolog4.6e-4165.62Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISL ATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++  DKSYSF F  NIW TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWLIY SGPC QH    S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

B0F817 S-protein homolog4.9e-4364.84Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

B0F818 S-protein homolog4.9e-4364.84Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

B9RWP2 S-protein homolog3.1e-2146.36Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDS
        K+ TVII N+L     L VHC+SKEDDLGVHI+    +Y F F+ N W  T F+C F W K  IH F IY   RD PK C++C+W++   GPC ++   +
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWDK
            CY W+K
Subjt:  PSLTCYPWDK

SwissProt top hitse value%identityAlignment
B3H730 S-protein homolog 189.7e-1238.95Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA--SCRWLIYTSGPC
        + + V I+N++     LG+HC+SK  DLG   +   + + FT   N+WETTLF+C F W + +   F I   KRD    C    C W I  SGPC
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA--SCRWLIYTSGPC

F4JLQ5 S-protein homolog 29.3e-1536.92Show/hide
Query:  LPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDN--PKGCAS-
        +P    +T+ +  T K+ TV I N+L     L  HC+SK+DDLG   ++  +S+SF+F    +  TL++CSF W   E H F IY   RD+     C S 
Subjt:  LPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDN--PKGCAS-

Query:  -CRWLIYTSGPCYQHIDSPSL-TCYPWDKA
         C W I  +GPC  + ++     CYPW+K+
Subjt:  -CRWLIYTSGPCYQHIDSPSL-TCYPWDKA

F4JZG1 S-protein homolog 48.7e-1339.45Show/hide
Query:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWE-TTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCASCRWLIYTSGPC-YQHIDS
        V I N L     L +HC+S +DDLG+ I+  + S+SF F+ +I    TLF+C F W  G+   F IYD  RD  +    C  C W I   GPC +  ID 
Subjt:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWE-TTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCASCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWD
            CY W+
Subjt:  PSLTCYPWD

O23020 S-protein homolog 56.3e-1939.62Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS
        + TV+ +  L   P L +HC+SK+DDLG+H++   + Y F F+ N+W++TLF+CSF+W   +   F IYD +RD    C  C+W I   GPC        
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS

Query:  LTCYPW
          C+PW
Subjt:  LTCYPW

Q9FMQ4 S-protein homolog 31.1e-1538.17Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---
        LL+ +  S   TD  +       V I N L     L +HC+S +DDLG+ I+  + S+SF F+T+I  TTLFYC F W  G+  +F IYD  RD  +   
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---

Query:  GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD
         C +C W I   GPC +   D     CY W+
Subjt:  GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family4.4e-2039.62Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS
        + TV+ +  L   P L +HC+SK+DDLG+H++   + Y F F+ N+W++TLF+CSF+W   +   F IYD +RD    C  C+W I   GPC        
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS

Query:  LTCYPW
          C+PW
Subjt:  LTCYPW

AT1G26796.1 Plant self-incompatibility protein S1 family3.5e-1740.17Show/hide
Query:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKR-DNPKG----CASCRWLIYTS
        L+ +PK   VII+N+L     L VHCR+K DDLGV  ++    + F F+ N+ +TT + CSFEW  G    F I+   R DNP+     C+ C W IY  
Subjt:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKR-DNPKG----CASCRWLIYTS

Query:  GPCYQHIDSPSLTCYPW
         PC    D     C+PW
Subjt:  GPCYQHIDSPSLTCYPW

AT1G26799.1 Plant self-incompatibility protein S1 family7.8e-1737.82Show/hide
Query:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRD----NPKG-CASCRWLIYTS
        L+ +PK   V+I N L     L VHC +KE DLG+  +    S+ F F+ N+ +TT + C+FEW  G I +F I+   RD    +P G C  C W IY  
Subjt:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRD----NPKG-CASCRWLIYTS

Query:  GPCYQHIDSPSLTCYPWDK
         PC +  D     C+ WD+
Subjt:  GPCYQHIDSPSLTCYPWDK

AT3G16970.1 Plant self-incompatibility protein S1 family2.3e-1638.6Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDN---PKGCASCRWLIYTSGPCYQHID
        + TV+I N+L     L  HC+SK DDLG   +  + ++SF F+ +++  TLF+C F W K E+H F IY   RD      GC  C W I   GPC  + +
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDN---PKGCASCRWLIYTSGPCYQHID

Query:  SPSL-TCYPWDKAS
        S     C PW+  S
Subjt:  SPSL-TCYPWDKAS

AT5G12060.1 Plant self-incompatibility protein S1 family7.8e-1738.17Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---
        LL+ +  S   TD  +       V I N L     L +HC+S +DDLG+ I+  + S+SF F+T+I  TTLFYC F W  G+  +F IYD  RD  +   
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---

Query:  GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD
         C +C W I   GPC +   D     CY W+
Subjt:  GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTTGTTGTTGTTACCCATCAGCCTACACGCCACTGATGAATTGATCGCAACTCCAAAGCAAGTTACAGTGATCATTGTTAACGAATTGGCTCTTACTCCACTATTGGG
CGTTCACTGCAGATCCAAGGAAGACGATTTGGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAGACCACACTATTTTACT
GTAGCTTCGAATGGGTGAAAGGTGAAATCCACCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCGCCAGCTGCAGATGGCTCATTTATACAAGTGGT
CCGTGTTATCAACACATAGACTCCCCCTCTCTTACTTGTTATCCTTGGGACAAGGCCAGCACTCTCAAA
mRNA sequenceShow/hide mRNA sequence
TTGTTGTTGTTGTTACCCATCAGCCTACACGCCACTGATGAATTGATCGCAACTCCAAAGCAAGTTACAGTGATCATTGTTAACGAATTGGCTCTTACTCCACTATTGGG
CGTTCACTGCAGATCCAAGGAAGACGATTTGGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACATCTGGGAGACCACACTATTTTACT
GTAGCTTCGAATGGGTGAAAGGTGAAATCCACCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCGCCAGCTGCAGATGGCTCATTTATACAAGTGGT
CCGTGTTATCAACACATAGACTCCCCCTCTCTTACTTGTTATCCTTGGGACAAGGCCAGCACTCTCAAA
Protein sequenceShow/hide protein sequence
LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSG
PCYQHIDSPSLTCYPWDKASTLK