; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007783 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007783
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationscaffold13:1221591..1221989
RNA-Seq ExpressionMS007783
SyntenyMS007783
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]7.8e-4365.62Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NVW TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]7.8e-4365.62Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NVW TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

EEF44294.1 conserved hypothetical protein [Ricinus communis]8.4e-2146.36Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDS
        K+ TVII N+L     L VHC+SKEDDLGVHI+    +Y F F+ N W  T F+C F W K  IH F IY   RD PK C++C+W++   GPC ++   +
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWDK
            CY W+K
Subjt:  PSLTCYPWDK

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]9.5e-4164.84Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISL ATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++  DKSYSF F  N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWLIY SGPC QH    S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]4.9e-3762.07Show/hide
Query:  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC
        +ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC
Subjt:  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC

Query:  YQHIDSPSLTCYPWDK
         QH ++ S+TC+PW+K
Subjt:  YQHIDSPSLTCYPWDK

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog2.4e-3762.07Show/hide
Query:  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC
        +ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C +CRWL+Y SGPC
Subjt:  DELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC

Query:  YQHIDSPSLTCYPWDK
         QH ++ S+TC+PW+K
Subjt:  YQHIDSPSLTCYPWDK

A0A5A7TXE8 S-protein homolog4.6e-4164.84Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISL ATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++  DKSYSF F  N+W TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWLIY SGPC QH    S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

B0F817 S-protein homolog3.8e-4365.62Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NVW TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

B0F818 S-protein homolog3.8e-4365.62Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA
        + LLLPISLHATDELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NVW TTLFYC FEWVKG+ H FTIYD+KRD  K C 
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA

Query:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK
        +CRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  SCRWLIYTSGPCYQHIDSPSLTCYPWDK

B9RWP2 S-protein homolog4.1e-2146.36Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDS
        K+ TVII N+L     L VHC+SKEDDLGVHI+    +Y F F+ N W  T F+C F W K  IH F IY   RD PK C++C+W++   GPC ++   +
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWDK
            CY W+K
Subjt:  PSLTCYPWDK

SwissProt top hitse value%identityAlignment
B3H730 S-protein homolog 187.4e-1240Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA--SCRWLIYTSGPC
        + + V I+N++     LG+HC+SK  DLG   +   + + FT   NVWETTLF+C F W + +   F I   KRD    C    C W I  SGPC
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCA--SCRWLIYTSGPC

F4JLQ5 S-protein homolog 21.2e-1436.92Show/hide
Query:  LPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDN--PKGCAS-
        +P    +T+ +  T K+ TV I N+L     L  HC+SK+DDLG   ++  +S+SF+F    +  TL++CSF W   E H F IY   RD+     C S 
Subjt:  LPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDN--PKGCAS-

Query:  -CRWLIYTSGPCYQHIDSPSL-TCYPWDKA
         C W I  +GPC  + ++     CYPW+K+
Subjt:  -CRWLIYTSGPCYQHIDSPSL-TCYPWDKA

F4JZG1 S-protein homolog 41.1e-1238.53Show/hide
Query:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWE-TTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCASCRWLIYTSGPC-YQHIDS
        V I N L     L +HC+S +DDLG+ I+  + S+SF F+ ++    TLF+C F W  G+   F IYD  RD  +    C  C W I   GPC +  ID 
Subjt:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWE-TTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCASCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWD
            CY W+
Subjt:  PSLTCYPWD

O23020 S-protein homolog 58.2e-1939.62Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS
        + TV+ +  L   P L +HC+SK+DDLG+H++   + Y F F+ N+W++TLF+CSF+W   +   F IYD +RD    C  C+W I   GPC        
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS

Query:  LTCYPW
          C+PW
Subjt:  LTCYPW

Q9FMQ4 S-protein homolog 31.1e-1537.4Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---
        LL+ +  S   TD  +       V I N L     L +HC+S +DDLG+ I+  + S+SF F+T++  TTLFYC F W  G+  +F IYD  RD  +   
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---

Query:  GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD
         C +C W I   GPC +   D     CY W+
Subjt:  GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family5.8e-2039.62Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS
        + TV+ +  L   P L +HC+SK+DDLG+H++   + Y F F+ N+W++TLF+CSF+W   +   F IYD +RD    C  C+W I   GPC        
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSGPCYQHIDSPS

Query:  LTCYPW
          C+PW
Subjt:  LTCYPW

AT1G26796.1 Plant self-incompatibility protein S1 family3.5e-1740.17Show/hide
Query:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKR-DNPKG----CASCRWLIYTS
        L+ +PK   VII+N+L     L VHCR+K DDLGV  ++    + F F+ N+ +TT + CSFEW  G    F I+   R DNP+     C+ C W IY  
Subjt:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKR-DNPKG----CASCRWLIYTS

Query:  GPCYQHIDSPSLTCYPW
         PC    D     C+PW
Subjt:  GPCYQHIDSPSLTCYPW

AT1G26799.1 Plant self-incompatibility protein S1 family1.0e-1637.82Show/hide
Query:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRD----NPKG-CASCRWLIYTS
        L+ +PK   V+I N L     L VHC +KE DLG+  +    S+ F F+ N+ +TT + C+FEW  G I +F I+   RD    +P G C  C W IY  
Subjt:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRD----NPKG-CASCRWLIYTS

Query:  GPCYQHIDSPSLTCYPWDK
         PC +  D     C+ WD+
Subjt:  GPCYQHIDSPSLTCYPWDK

AT3G16970.1 Plant self-incompatibility protein S1 family3.9e-1639.64Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDN---PKGCASCRWLIYTSGPCYQHID
        + TV+I N+L     L  HC+SK DDLG   +  + ++SF F+ +V+  TLF+C F W K E+H F IY   RD      GC  C W I   GPC  + +
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDN---PKGCASCRWLIYTSGPCYQHID

Query:  SPSL-TCYPWD
        S     C PW+
Subjt:  SPSL-TCYPWD

AT5G12060.1 Plant self-incompatibility protein S1 family7.8e-1737.4Show/hide
Query:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---
        LL+ +  S   TD  +       V I N L     L +HC+S +DDLG+ I+  + S+SF F+T++  TTLFYC F W  G+  +F IYD  RD  +   
Subjt:  LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---

Query:  GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD
         C +C W I   GPC +   D     CY W+
Subjt:  GCASCRWLIYTSGPC-YQHIDSPSLTCYPWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTTGTTGTTGTTACCCATTAGCCTACACGCTACTGATGAATTGATCGCAACTCCAAAGCAAGTGACAGTGATCATTGTTAACGAATTGGCACTTACCCCACTATTGGG
CGTTCACTGCAGATCCAAGGAAGACGATTTGGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACGTTTGGGAGACCACACTATTTTACT
GTAGCTTCGAATGGGTGAAAGGTGAAATCCACCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCGCCAGCTGCAGATGGCTCATTTACACAAGTGGT
CCGTGTTATCAACACATAGACTCCCCCTCTCTTACTTGCTATCCTTGGGACAAGGCCAACACTCTCAAA
mRNA sequenceShow/hide mRNA sequence
TTGTTGTTGTTGTTACCCATTAGCCTACACGCTACTGATGAATTGATCGCAACTCCAAAGCAAGTGACAGTGATCATTGTTAACGAATTGGCACTTACCCCACTATTGGG
CGTTCACTGCAGATCCAAGGAAGACGATTTGGGAGTCCATATCATAGAGGCAGATAAAAGCTACTCTTTTACCTTTAAAACCAACGTTTGGGAGACCACACTATTTTACT
GTAGCTTCGAATGGGTGAAAGGTGAAATCCACCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCGCCAGCTGCAGATGGCTCATTTACACAAGTGGT
CCGTGTTATCAACACATAGACTCCCCCTCTCTTACTTGCTATCCTTGGGACAAGGCCAACACTCTCAAA
Protein sequenceShow/hide protein sequence
LLLLLPISLHATDELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNVWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCASCRWLIYTSG
PCYQHIDSPSLTCYPWDKANTLK