; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007784 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007784
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant self-incompatibility protein S1 family
Genome locationscaffold13:1227211..1227594
RNA-Seq ExpressionMS007784
SyntenyMS007784
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABY56091.1 self-incompatibility protein 1 [Cucumis melo]4.4e-4365.62Show/hide
Query:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT
        + LLLPISLHAT ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K CT
Subjt:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT

Query:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK
        NCRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK

ABY56092.1 self-incompatibility protein 2 [Cucumis melo]4.4e-4365.62Show/hide
Query:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT
        + LLLPISLHAT ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K CT
Subjt:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT

Query:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK
        NCRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK

EEF44294.1 conserved hypothetical protein [Ricinus communis]6.2e-2146.36Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPC-YQHIDS
        K+ TVII N+L     L VHC+SKEDDLGVHI+    +Y F F+ N W  T F+C F W K  IH F IY   RD PK C+ C+W++   GPC ++   +
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWDK
            CY W+K
Subjt:  PSLTCYPWDK

KAA0046095.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]3.2e-4166.41Show/hide
Query:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT
        + LLLPISL AT ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++  DKSYSF F  NIW TTLFYC FEWVKG+ H FTIYD+KRD  K CT
Subjt:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT

Query:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK
        NCRWLIY SGPC QH    S+TC+PW+K
Subjt:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK

KAA0046284.1 self-incompatibility protein 1 [Cucumis melo var. makuwa]1.9e-3864.66Show/hide
Query:  HELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPC
        +ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NIW TTLFYC FEWVKG+ H FTIYD+KRD  K CTNCRWL+Y SGPC
Subjt:  HELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPC

Query:  YQHIDSPSLTCYPWDK
         QH ++ S+TC+PW+K
Subjt:  YQHIDSPSLTCYPWDK

TrEMBL top hitse value%identityAlignment
A0A5A7TT98 S-protein homolog9.3e-3964.66Show/hide
Query:  HELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPC
        +ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ NIW TTLFYC FEWVKG+ H FTIYD+KRD  K CTNCRWL+Y SGPC
Subjt:  HELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPC

Query:  YQHIDSPSLTCYPWDK
         QH ++ S+TC+PW+K
Subjt:  YQHIDSPSLTCYPWDK

A0A5A7TXE8 S-protein homolog1.5e-4166.41Show/hide
Query:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT
        + LLLPISL AT ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++  DKSYSF F  NIW TTLFYC FEWVKG+ H FTIYD+KRD  K CT
Subjt:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT

Query:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK
        NCRWLIY SGPC QH    S+TC+PW+K
Subjt:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK

B0F817 S-protein homolog2.1e-4365.62Show/hide
Query:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT
        + LLLPISLHAT ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K CT
Subjt:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT

Query:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK
        NCRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK

B0F818 S-protein homolog2.1e-4365.62Show/hide
Query:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT
        + LLLPISLHAT ELI+   + TV IVNE+   PLLG+HCRSK+DDLGV+++ +DKSYSF F+ N+W TTLFYC FEWVKG+ H FTIYD+KRD  K CT
Subjt:  LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT

Query:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK
        NCRWL+Y SGPC QH ++ S+TC+PW+K
Subjt:  NCRWLIYTSGPCYQHIDSPSLTCYPWDK

B9RWP2 S-protein homolog3.0e-2146.36Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPC-YQHIDS
        K+ TVII N+L     L VHC+SKEDDLGVHI+    +Y F F+ N W  T F+C F W K  IH F IY   RD PK C+ C+W++   GPC ++   +
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWDK
            CY W+K
Subjt:  PSLTCYPWDK

SwissProt top hitse value%identityAlignment
B3H730 S-protein homolog 181.2e-1138.95Show/hide
Query:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT--NCRWLIYTSGPC
        + + V I+N++     LG+HC+SK  DLG   +   + + FT   N+WETTLF+C F W + +   F I   KRD    C    C W I  SGPC
Subjt:  KQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCT--NCRWLIYTSGPC

F4JLQ5 S-protein homolog 21.5e-1436.43Show/hide
Query:  LPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIY----DYKRDNPKGCT
        +P    +T+ +  T K+ TV I N+L     L  HC+SK+DDLG   ++  +S+SF+F    +  TL++CSF W   E H F IY    D   DN     
Subjt:  LPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIY----DYKRDNPKGCT

Query:  NCRWLIYTSGPCYQHIDSPSL-TCYPWDK
         C W I  +GPC  + ++     CYPW+K
Subjt:  NCRWLIYTSGPCYQHIDSPSL-TCYPWDK

F4JZG1 S-protein homolog 48.4e-1339.45Show/hide
Query:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWE-TTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCTNCRWLIYTSGPC-YQHIDS
        V I N L     L +HC+S +DDLG+ I+  + S+SF F+ +I    TLF+C F W  G+   F IYD  RD  +    C  C W I   GPC +  ID 
Subjt:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWE-TTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCTNCRWLIYTSGPC-YQHIDS

Query:  PSLTCYPWD
            CY W+
Subjt:  PSLTCYPWD

O23020 S-protein homolog 53.5e-1939.62Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPCYQHIDSPS
        + TV+ +  L   P L +HC+SK+DDLG+H++   + Y F F+ N+W++TLF+CSF+W   +   F IYD +RD    C +C+W I   GPC        
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPCYQHIDSPS

Query:  LTCYPW
          C+PW
Subjt:  LTCYPW

Q9FMQ4 S-protein homolog 31.6e-1642.59Show/hide
Query:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCTNCRWLIYTSGPC-YQHIDSP
        V I N L     L +HC+S +DDLG+ I+  + S+SF F+T+I  TTLFYC F W  G+  +F IYD  RD  +    C NC W I   GPC +   D  
Subjt:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCTNCRWLIYTSGPC-YQHIDSP

Query:  SLTCYPWD
           CY W+
Subjt:  SLTCYPWD

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.5e-2039.62Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPCYQHIDSPS
        + TV+ +  L   P L +HC+SK+DDLG+H++   + Y F F+ N+W++TLF+CSF+W   +   F IYD +RD    C +C+W I   GPC        
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSGPCYQHIDSPS

Query:  LTCYPW
          C+PW
Subjt:  LTCYPW

AT1G26796.1 Plant self-incompatibility protein S1 family2.6e-1740.17Show/hide
Query:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKR-DNPKG----CTNCRWLIYTS
        L+ +PK   VII+N+L     L VHCR+K DDLGV  ++    + F F+ N+ +TT + CSFEW  G    F I+   R DNP+     C+ C W IY  
Subjt:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKR-DNPKG----CTNCRWLIYTS

Query:  GPCYQHIDSPSLTCYPW
         PC    D     C+PW
Subjt:  GPCYQHIDSPSLTCYPW

AT1G26799.1 Plant self-incompatibility protein S1 family5.8e-1737.82Show/hide
Query:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRD----NPKG-CTNCRWLIYTS
        L+ +PK   V+I N L     L VHC +KE DLG+  +    S+ F F+ N+ +TT + C+FEW  G I +F I+   RD    +P G C  C W IY  
Subjt:  LIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRD----NPKG-CTNCRWLIYTS

Query:  GPCYQHIDSPSLTCYPWDK
         PC +  D     C+ WD+
Subjt:  GPCYQHIDSPSLTCYPWDK

AT3G16970.1 Plant self-incompatibility protein S1 family3.7e-1638.74Show/hide
Query:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDN---PKGCTNCRWLIYTSGPCYQHID
        + TV+I N+L     L  HC+SK DDLG   +  + ++SF F+ +++  TLF+C F W K E+H F IY   RD      GC  C W I   GPC  + +
Subjt:  QVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDN---PKGCTNCRWLIYTSGPCYQHID

Query:  SPSL-TCYPWD
        S     C PW+
Subjt:  SPSL-TCYPWD

AT5G12060.1 Plant self-incompatibility protein S1 family1.2e-1742.59Show/hide
Query:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCTNCRWLIYTSGPC-YQHIDSP
        V I N L     L +HC+S +DDLG+ I+  + S+SF F+T+I  TTLFYC F W  G+  +F IYD  RD  +    C NC W I   GPC +   D  
Subjt:  VIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPK---GCTNCRWLIYTSGPC-YQHIDSP

Query:  SLTCYPWD
           CY W+
Subjt:  SLTCYPWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTTGTTGTTGTTACCCATCAGCCTACACGCCACTCATGAATTGATTGCAACTCCAAAACAAGTTACAGTGATCATTGTTAACGAATTGGCTCTTACTCCACTATTGGG
CGTTCACTGCAGATCCAAAGAAGACGATTTGGGAGTCCATATCATAGAGGCAGATAAAAGTTACTCTTTTACCTTTAAAACCAACATCTGGGAGACGACACTATTTTACT
GTAGCTTCGAATGGGTGAAAGGTGAAATCCACCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCACCAACTGCAGATGGCTCATTTATACGAGTGGC
CCGTGTTATCAACACATAGACTCTCCCTCTCTTACTTGCTATCCTTGGGATAAG
mRNA sequenceShow/hide mRNA sequence
TTGTTGTTGTTGTTACCCATCAGCCTACACGCCACTCATGAATTGATTGCAACTCCAAAACAAGTTACAGTGATCATTGTTAACGAATTGGCTCTTACTCCACTATTGGG
CGTTCACTGCAGATCCAAAGAAGACGATTTGGGAGTCCATATCATAGAGGCAGATAAAAGTTACTCTTTTACCTTTAAAACCAACATCTGGGAGACGACACTATTTTACT
GTAGCTTCGAATGGGTGAAAGGTGAAATCCACCAGTTTACGATTTATGACTACAAAAGAGATAATCCAAAAGGTTGCACCAACTGCAGATGGCTCATTTATACGAGTGGC
CCGTGTTATCAACACATAGACTCTCCCTCTCTTACTTGCTATCCTTGGGATAAG
Protein sequenceShow/hide protein sequence
LLLLLPISLHATHELIATPKQVTVIIVNELALTPLLGVHCRSKEDDLGVHIIEADKSYSFTFKTNIWETTLFYCSFEWVKGEIHQFTIYDYKRDNPKGCTNCRWLIYTSG
PCYQHIDSPSLTCYPWDK