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MS007786 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007786
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold13:1233351..1233662
RNA-Seq ExpressionMS007786
SyntenyMS007786
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4292513.1 unnamed protein product [Prunus armeniaca]4.7e-2755.88Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        VNITN L     LT+HCKS +DDLG H LP LISY F F+PN+  +  +FCS +WPG+ HY +IY QKRDQD C+ C+W++   G CL N +T  YDICY
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TW
         W
Subjt:  TW

KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]2.3e-2960Show/hide
Query:  VNITNVLES-HQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLKYD
        VNITN L+  + QLT+HCKS +DDLG HQL  L SYAF+F+PN   S LF+C+F W GS HYF IY   RD+  CN   CLWIVGE+GLC+ + +T  YD
Subjt:  VNITNVLES-HQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLKYD

Query:  ICYTW
        ICYTW
Subjt:  ICYTW

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]7.2e-2855.66Show/hide
Query:  VNITNVLES-HQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLKYD
        VNITN +   + QLTVHCKS +DDLG H+LP L+SY F F+PN   S LF+C FQW    HYF+IY   RD   CN   CLWI+ EKG+C+ N  T  YD
Subjt:  VNITNVLES-HQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLKYD

Query:  ICYTWP
         CY WP
Subjt:  ICYTWP

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]5.9e-3060.19Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN-FCLWIVGEKGLCLHNSRTLKYDIC
        VNITN L    QLTVHCKS +DDLG HQL  L  YAF F+PN + + LF+C+FQWPG  H F+IY   RD+D CN  CLWIVGE+G+C+ +  T KYD C
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN-FCLWIVGEKGLCLHNSRTLKYDIC

Query:  YTW
        YTW
Subjt:  YTW

XP_022138779.1 S-protein homolog 5 [Momordica charantia]1.4e-5086.54Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        VNITN+LESHQQLTVHCKSK+DDLGFHQLP LISYAFDF+PN+  S LFFCSFQWPGSFHYFEIYNQKRD+D+C  CLWIVGEKGLCL+NS+TLKYDICY
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TWPS
        TWPS
Subjt:  TWPS

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog1.1e-2960Show/hide
Query:  VNITNVLES-HQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLKYD
        VNITN L+  + QLT+HCKS +DDLG HQL  L SYAF+F+PN   S LF+C+F W GS HYF IY   RD+  CN   CLWIVGE+GLC+ + +T  YD
Subjt:  VNITNVLES-HQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLKYD

Query:  ICYTW
        ICYTW
Subjt:  ICYTW

A0A1S3CDK4 S-protein homolog3.5e-2855.66Show/hide
Query:  VNITNVLES-HQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLKYD
        VNITN +   + QLTVHCKS +DDLG H+LP L+SY F F+PN   S LF+C FQW    HYF+IY   RD   CN   CLWI+ EKG+C+ N  T  YD
Subjt:  VNITNVLES-HQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLKYD

Query:  ICYTWP
         CY WP
Subjt:  ICYTWP

A0A1S3CP53 S-protein homolog2.9e-3060.19Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN-FCLWIVGEKGLCLHNSRTLKYDIC
        VNITN L    QLTVHCKS +DDLG HQL  L  YAF F+PN + + LF+C+FQWPG  H F+IY   RD+D CN  CLWIVGE+G+C+ +  T KYD C
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN-FCLWIVGEKGLCLHNSRTLKYDIC

Query:  YTW
        YTW
Subjt:  YTW

A0A6J1CB24 S-protein homolog6.6e-5186.54Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        VNITN+LESHQQLTVHCKSK+DDLGFHQLP LISYAFDF+PN+  S LFFCSFQWPGSFHYFEIYNQKRD+D+C  CLWIVGEKGLCL+NS+TLKYDICY
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TWPS
        TWPS
Subjt:  TWPS

A0A6J5VW08 S-protein homolog2.3e-2755.88Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        VNITN L     LT+HCKS +DDLG H LP LISY F F+PN+  +  +FCS +WPG+ HY +IY QKRDQD C+ C+W++   G CL N +T  YDICY
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TW
         W
Subjt:  TW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 21.7e-1639.25Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN-----FCLWIVGEKGLCLHNSRTLK
        V I N L +   L  HCKSK+DDLG   L    S++F F        L+FCSF WP   H F+IY   RD    N      C+W +   G C  N  T +
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN-----FCLWIVGEKGLCLHNSRTLK

Query:  YDICYTW
        +D+CY W
Subjt:  YDICYTW

F4JZG1 S-protein homolog 41.7e-1640.19Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSI-LFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLK
        V ITN L     L +HCKS +DDLG   L    S++F F+P+I+  + LFFC F WPG   +F IY+  RD       C +C+W +G+ G C  +     
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSI-LFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLK

Query:  YDICYTW
        ++ICY W
Subjt:  YDICYTW

O23020 S-protein homolog 54.4e-2046.08Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        V +TN++     LT+HCKSK DDLG H +P    Y F FQPN+  S LFFCSFQW   F  F+IY+ +RDQ +C+ C W +   G C    R  K   C+
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TW
         W
Subjt:  TW

P0DN93 S-protein homolog 294.3e-1534.31Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        V +TN +     LT+ C+SK+DDLG H L    ++ + F+P+   + LF C F W  +  +F+ Y   RDQ  C  C W +     C+  +   K+D CY
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TW
         W
Subjt:  TW

Q9FMQ4 S-protein homolog 31.5e-1537.74Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLKY
        V ITN L     L +HCKS +DDLG   L    S++F F+ +I+ + LF+C F WPG    F+IY+  RD       C  C+W +  +G C+ +     +
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLKY

Query:  DICYTW
        +ICY W
Subjt:  DICYTW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family3.1e-2146.08Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        V +TN++     LT+HCKSK DDLG H +P    Y F FQPN+  S LFFCSFQW   F  F+IY+ +RDQ +C+ C W +   G C    R  K   C+
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TW
         W
Subjt:  TW

AT3G16970.1 Plant self-incompatibility protein S1 family2.3e-1938.89Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDV----CNFCLWIVGEKGLCLHNSRTLKY
        V I N L  H  L  HCKSKNDDLG   +    +++F+F+P++    LFFC F W    H+F+IY Q RD++     C  C W + + G C  N  +  +
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDV----CNFCLWIVGEKGLCLHNSRTLKY

Query:  DICYTWPS
        D+C  W S
Subjt:  DICYTWPS

AT3G17080.1 Plant self-incompatibility protein S1 family2.8e-1738.68Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDV----CNFCLWIVGEKGLCLHNSRTLKY
        V I N L     L  HCKS+ DDLG+  L    S++F F P+I    LF+C F W    H F+IY Q RD++     C  C W + + G C    +T  +
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDV----CNFCLWIVGEKGLCLHNSRTLKY

Query:  DICYTW
        D CY+W
Subjt:  DICYTW

AT4G16195.1 Plant self-incompatibility protein S1 family1.2e-1739.25Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN-----FCLWIVGEKGLCLHNSRTLK
        V I N L +   L  HCKSK+DDLG   L    S++F F        L+FCSF WP   H F+IY   RD    N      C+W +   G C  N  T +
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCN-----FCLWIVGEKGLCLHNSRTLK

Query:  YDICYTW
        +D+CY W
Subjt:  YDICYTW

AT5G12070.1 Plant self-incompatibility protein S1 family1.2e-1740.19Show/hide
Query:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSI-LFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLK
        V ITN L     L +HCKS +DDLG   L    S++F F+P+I+  + LFFC F WPG   +F IY+  RD       C +C+W +G+ G C  +     
Subjt:  VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSI-LFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLK

Query:  YDICYTW
        ++ICY W
Subjt:  YDICYTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAACATAACAAATGTTTTGGAAAGTCATCAGCAGCTCACCGTTCACTGCAAATCCAAGAACGACGATCTCGGATTCCATCAGCTGCCTTCTCTGATCAGCTACGCCTT
CGATTTCCAACCGAACATCTTGAGTTCGATACTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTTCACTACTTTGAGATCTACAACCAAAAGAGAGACCAAGATGTTT
GCAACTTTTGTTTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGCACAACAGCAGAACCCTCAAGTACGATATTTGCTATACATGGCCATCC
mRNA sequenceShow/hide mRNA sequence
GTGAACATAACAAATGTTTTGGAAAGTCATCAGCAGCTCACCGTTCACTGCAAATCCAAGAACGACGATCTCGGATTCCATCAGCTGCCTTCTCTGATCAGCTACGCCTT
CGATTTCCAACCGAACATCTTGAGTTCGATACTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTTCACTACTTTGAGATCTACAACCAAAAGAGAGACCAAGATGTTT
GCAACTTTTGTTTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGCACAACAGCAGAACCCTCAAGTACGATATTTGCTATACATGGCCATCC
Protein sequenceShow/hide protein sequence
VNITNVLESHQQLTVHCKSKNDDLGFHQLPSLISYAFDFQPNILSSILFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICYTWPS