; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007790 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007790
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold13:1242006..1242416
RNA-Seq ExpressionMS007790
SyntenyMS007790
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]1.3e-3258.02Show/hide
Query:  SLVLSLSFLVLFSTICLNVEASPQVSVNITNVLES-HQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDV
        SL +SL F  +F TI      SP V+VNITN L+  + QLT+HCKS DDDLG HQL  L SYAF+F+PN   STLF+C+F W GS HYF IY   RD+  
Subjt:  SLVLSLSFLVLFSTICLNVEASPQVSVNITNVLES-HQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDV

Query:  CN--FCLWIVGEKGLCLHNSRTLKYDICYTW
        CN   CLWIVGE+GLC+ + +T  YDICYTW
Subjt:  CN--FCLWIVGEKGLCLHNSRTLKYDICYTW

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]3.9e-2956.48Show/hide
Query:  VSVNITNVLES-HQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLK
        ++VNITN +   + QLTVHCKS DDDLG H+LP L+SY F F+PN   STLF+C FQW    HYF+IY   RD   CN   CLWI+ EKG+C+ N  T  
Subjt:  VSVNITNVLES-HQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLK

Query:  YDICYTWP
        YD CY WP
Subjt:  YDICYTWP

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]2.2e-3261.11Show/hide
Query:  SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN-FCLWIVGEKGLCLHNSRTL
        +P V+VNITN L    QLTVHCKS DDDLG HQL  L  YAF F+PN + +TLF+C+FQWPG  H F+IY   RD+D CN  CLWIVGE+G+C+ +  T 
Subjt:  SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN-FCLWIVGEKGLCLHNSRTL

Query:  KYDICYTW
        KYD CYTW
Subjt:  KYDICYTW

XP_022138779.1 S-protein homolog 5 [Momordica charantia]2.8e-6486.96Show/hide
Query:  MAAAPSASLVLSLSFLVLFSTICLNVEA-SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYN
        MAAAPS SLVLSLSFLVLFSTIC+NVEA S + SVNITN+LESHQQLTVHCKSKDDDLGFHQLP LISYAFDF+PN+  STLFFCSFQWPGSFHYFEIYN
Subjt:  MAAAPSASLVLSLSFLVLFSTICLNVEA-SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYN

Query:  QKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICYTWPS
        QKRD+D+C  CLWIVGEKGLCL+NS+TLKYDICYTWPS
Subjt:  QKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICYTWPS

XP_022975116.1 S-protein homolog 3-like, partial [Cucurbita maxima]3.9e-2959.46Show/hide
Query:  LSLSFLVLFSTICLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN--
        +SLSF  LF+TI  ++   P ++VNITNVLESH QLTVHCKS DDDLG HQLP L  YAF F+PN   +T F+C+FQWPG   YF+IY   RD+  CN  
Subjt:  LSLSFLVLFSTICLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN--

Query:  FCLWIVGEKGL
         CLWIVG++G+
Subjt:  FCLWIVGEKGL

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog6.2e-3358.02Show/hide
Query:  SLVLSLSFLVLFSTICLNVEASPQVSVNITNVLES-HQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDV
        SL +SL F  +F TI      SP V+VNITN L+  + QLT+HCKS DDDLG HQL  L SYAF+F+PN   STLF+C+F W GS HYF IY   RD+  
Subjt:  SLVLSLSFLVLFSTICLNVEASPQVSVNITNVLES-HQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDV

Query:  CN--FCLWIVGEKGLCLHNSRTLKYDICYTW
        CN   CLWIVGE+GLC+ + +T  YDICYTW
Subjt:  CN--FCLWIVGEKGLCLHNSRTLKYDICYTW

A0A1S3CDK4 S-protein homolog1.9e-2956.48Show/hide
Query:  VSVNITNVLES-HQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLK
        ++VNITN +   + QLTVHCKS DDDLG H+LP L+SY F F+PN   STLF+C FQW    HYF+IY   RD   CN   CLWI+ EKG+C+ N  T  
Subjt:  VSVNITNVLES-HQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN--FCLWIVGEKGLCLHNSRTLK

Query:  YDICYTWP
        YD CY WP
Subjt:  YDICYTWP

A0A1S3CP53 S-protein homolog1.1e-3261.11Show/hide
Query:  SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN-FCLWIVGEKGLCLHNSRTL
        +P V+VNITN L    QLTVHCKS DDDLG HQL  L  YAF F+PN + +TLF+C+FQWPG  H F+IY   RD+D CN  CLWIVGE+G+C+ +  T 
Subjt:  SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN-FCLWIVGEKGLCLHNSRTL

Query:  KYDICYTW
        KYD CYTW
Subjt:  KYDICYTW

A0A6J1CB24 S-protein homolog1.4e-6486.96Show/hide
Query:  MAAAPSASLVLSLSFLVLFSTICLNVEA-SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYN
        MAAAPS SLVLSLSFLVLFSTIC+NVEA S + SVNITN+LESHQQLTVHCKSKDDDLGFHQLP LISYAFDF+PN+  STLFFCSFQWPGSFHYFEIYN
Subjt:  MAAAPSASLVLSLSFLVLFSTICLNVEA-SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYN

Query:  QKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICYTWPS
        QKRD+D+C  CLWIVGEKGLCL+NS+TLKYDICYTWPS
Subjt:  QKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICYTWPS

A0A6J1IDA7 S-protein homolog1.9e-2959.46Show/hide
Query:  LSLSFLVLFSTICLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN--
        +SLSF  LF+TI  ++   P ++VNITNVLESH QLTVHCKS DDDLG HQLP L  YAF F+PN   +T F+C+FQWPG   YF+IY   RD+  CN  
Subjt:  LSLSFLVLFSTICLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN--

Query:  FCLWIVGEKGL
         CLWIVG++G+
Subjt:  FCLWIVGEKGL

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 29.3e-1840.74Show/hide
Query:  SVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN-----FCLWIVGEKGLCLHNSRTL
        +V I N L +   L  HCKSKDDDLG   L    S++F F       TL+FCSF WP   H F+IY   RD    N      C+W +   G C  N  T 
Subjt:  SVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN-----FCLWIVGEKGLCLHNSRTL

Query:  KYDICYTW
        ++D+CY W
Subjt:  KYDICYTW

F4JZG1 S-protein homolog 43.5e-1742.06Show/hide
Query:  VNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSS-TLFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLK
        V ITN L     L +HCKS DDDLG   L    S++F F+P+I+   TLFFC F WPG   +F IY+  RD       C +C+W +G+ G C  +     
Subjt:  VNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSS-TLFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLK

Query:  YDICYTW
        ++ICY W
Subjt:  YDICYTW

O23020 S-protein homolog 51.2e-2047.06Show/hide
Query:  VNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        V +TN++     LT+HCKSK DDLG H +P    Y F FQPN+  STLFFCSFQW   F  F+IY+ +RDQ +C+ C W +   G C    R  K   C+
Subjt:  VNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TW
         W
Subjt:  TW

P0DN93 S-protein homolog 293.9e-1633.07Show/hide
Query:  LVLSLSFLVLFSTICLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN
        +VLS+    + S+ C       +  V +TN +     LT+ C+SKDDDLG H L    ++ + F+P+   +TLF C F W  +  +F+ Y   RDQ  C 
Subjt:  LVLSLSFLVLFSTICLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN

Query:  FCLWIVGEKGLCLHNSRTLKYDICYTW
         C W +     C+  +   K+D CY W
Subjt:  FCLWIVGEKGLCLHNSRTLKYDICYTW

Q9FMQ4 S-protein homolog 32.3e-1636.09Show/hide
Query:  LVLSLSFLVLFSTI--CLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRD---
        +V+ L   + FS +    +V  S    V ITN L     L +HCKS DDDLG   L    S++F F+ +I+ +TLF+C F WPG    F+IY+  RD   
Subjt:  LVLSLSFLVLFSTI--CLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRD---

Query:  -QDVCNFCLWIVGEKGLCLHNSRTLKYDICYTW
            C  C+W +  +G C+ +     ++ICY W
Subjt:  -QDVCNFCLWIVGEKGLCLHNSRTLKYDICYTW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family8.3e-2247.06Show/hide
Query:  VNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY
        V +TN++     LT+HCKSK DDLG H +P    Y F FQPN+  STLFFCSFQW   F  F+IY+ +RDQ +C+ C W +   G C    R  K   C+
Subjt:  VNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCNFCLWIVGEKGLCLHNSRTLKYDICY

Query:  TW
         W
Subjt:  TW

AT3G16970.1 Plant self-incompatibility protein S1 family1.6e-2038.05Show/hide
Query:  SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDV----CNFCLWIVGEKGLCLHNS
        +P+ +V I N L  H  L  HCKSK+DDLG   +    +++F+F+P++   TLFFC F W    H+F+IY Q RD++     C  C W + + G C  N 
Subjt:  SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDV----CNFCLWIVGEKGLCLHNS

Query:  RTLKYDICYTWPS
         +  +D+C  W S
Subjt:  RTLKYDICYTWPS

AT3G17080.1 Plant self-incompatibility protein S1 family3.3e-1836.64Show/hide
Query:  SLSFLVLFSTICLNVEA---SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDV--
        SL   +LF  + + + A       SV I N L     L  HCKS++DDLG+  L    S++F F P+I   TLF+C F W    H F+IY Q RD++   
Subjt:  SLSFLVLFSTICLNVEA---SPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDV--

Query:  --CNFCLWIVGEKGLCLHNSRTLKYDICYTW
          C  C W + + G C    +T  +D CY+W
Subjt:  --CNFCLWIVGEKGLCLHNSRTLKYDICYTW

AT4G16195.1 Plant self-incompatibility protein S1 family6.6e-1940.74Show/hide
Query:  SVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN-----FCLWIVGEKGLCLHNSRTL
        +V I N L +   L  HCKSKDDDLG   L    S++F F       TL+FCSF WP   H F+IY   RD    N      C+W +   G C  N  T 
Subjt:  SVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCN-----FCLWIVGEKGLCLHNSRTL

Query:  KYDICYTW
        ++D+CY W
Subjt:  KYDICYTW

AT5G12070.1 Plant self-incompatibility protein S1 family2.5e-1842.06Show/hide
Query:  VNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSS-TLFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLK
        V ITN L     L +HCKS DDDLG   L    S++F F+P+I+   TLFFC F WPG   +F IY+  RD       C +C+W +G+ G C  +     
Subjt:  VNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSS-TLFFCSFQWPGSFHYFEIYNQKRD----QDVCNFCLWIVGEKGLCLHNSRTLK

Query:  YDICYTW
        ++ICY W
Subjt:  YDICYTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCTCCCTCAGCTTCCTTGGTGCTCTCTTTGTCTTTCCTCGTATTGTTCTCAACAATATGTTTAAATGTGGAGGCATCTCCTCAAGTGTCAGTGAACATAAC
AAATGTTTTGGAAAGTCATCAGCAGCTCACCGTTCACTGCAAATCGAAGGACGACGATCTCGGATTCCATCAGCTGCCTTCTCTGATCAGCTACGCCTTCGATTTCCAAC
CGAACATCTTGAGTTCGACGCTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTTCACTACTTTGAGATCTACAACCAAAAGAGAGACCAAGATGTTTGCAACTTTTGT
TTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGCACAACAGCAGAACCCTCAAGTACGATATTTGCTATACATGGCCATCC
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAGCTCCCTCAGCTTCCTTGGTGCTCTCTTTGTCTTTCCTCGTATTGTTCTCAACAATATGTTTAAATGTGGAGGCATCTCCTCAAGTGTCAGTGAACATAAC
AAATGTTTTGGAAAGTCATCAGCAGCTCACCGTTCACTGCAAATCGAAGGACGACGATCTCGGATTCCATCAGCTGCCTTCTCTGATCAGCTACGCCTTCGATTTCCAAC
CGAACATCTTGAGTTCGACGCTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTTCACTACTTTGAGATCTACAACCAAAAGAGAGACCAAGATGTTTGCAACTTTTGT
TTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGCACAACAGCAGAACCCTCAAGTACGATATTTGCTATACATGGCCATCC
Protein sequenceShow/hide protein sequence
MAAAPSASLVLSLSFLVLFSTICLNVEASPQVSVNITNVLESHQQLTVHCKSKDDDLGFHQLPSLISYAFDFQPNILSSTLFFCSFQWPGSFHYFEIYNQKRDQDVCNFC
LWIVGEKGLCLHNSRTLKYDICYTWPS