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MS007791 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007791
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold13:1246745..1247173
RNA-Seq ExpressionMS007791
SyntenyMS007791
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4261940.1 unnamed protein product [Prunus armeniaca]3.0e-3258.04Show/hide
Query:  NVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLCLYN
        N  AL     VNITN L     LT+HCKS DDDLG H LPPLISY F FRPN+W +T +FCS +WPG+ HY +IY QKRD+D C +C+W++   G CL+N
Subjt:  NVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLCLYN

Query:  SKTLKYDICYTW
         KT  YDICY W
Subjt:  SKTLKYDICYTW

CAB4292513.1 unnamed protein product [Prunus armeniaca]3.9e-3254.69Show/hide
Query:  LVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLC
        LV   S  +  + I  NV AL     VNITN L     LT+HCKS DDDLG H LPPLISY F FRPN+W +T +FCS +WPG+ HY +IY QKRD+D C
Subjt:  LVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLC

Query:  TLCLWIVGEKGLCLYNSKTLKYDICYTW
         +C+W++   G CL+N KT  YDICY W
Subjt:  TLCLWIVGEKGLCLYNSKTLKYDICYTW

KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]4.6e-3359.09Show/hide
Query:  LSLSFLVLFSTICVNVEA---LSARASVNITNILES-HQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDED
        LSL   +LF+TI   +E     S   +VNITN L+  + QLT+HCKS DDDLG HQL  L SYAF+FRPN W STLF+C+F W GS HYF IY   RD  
Subjt:  LSLSFLVLFSTICVNVEA---LSARASVNITNILES-HQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDED

Query:  LC--TLCLWIVGEKGLCLYNSKTLKYDICYTW
         C  TLCLWIVGE+GLC+++ KT  YDICYTW
Subjt:  LC--TLCLWIVGEKGLCLYNSKTLKYDICYTW

PQM34427.1 hypothetical protein Pyn_35961 [Prunus yedoensis var. nudiflora]5.1e-3257.39Show/hide
Query:  ICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLC
        I  NV AL     VNITN L     LT+HCKS D DLG H LPPLISY F FRPN+W +T +FCS +WPG+ HY +IY QKRD+D C +C+W++   G C
Subjt:  ICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLC

Query:  LYNSKTLKYDICYTW
        L+N KT  YDICY W
Subjt:  LYNSKTLKYDICYTW

XP_022138779.1 S-protein homolog 5 [Momordica charantia]8.3e-75100Show/hide
Query:  MAAAPSTSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYN
        MAAAPSTSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYN
Subjt:  MAAAPSTSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYN

Query:  QKRDEDLCTLCLWIVGEKGLCLYNSKTLKYDICYTWPS
        QKRDEDLCTLCLWIVGEKGLCLYNSKTLKYDICYTWPS
Subjt:  QKRDEDLCTLCLWIVGEKGLCLYNSKTLKYDICYTWPS

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog2.2e-3359.09Show/hide
Query:  LSLSFLVLFSTICVNVEA---LSARASVNITNILES-HQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDED
        LSL   +LF+TI   +E     S   +VNITN L+  + QLT+HCKS DDDLG HQL  L SYAF+FRPN W STLF+C+F W GS HYF IY   RD  
Subjt:  LSLSFLVLFSTICVNVEA---LSARASVNITNILES-HQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDED

Query:  LC--TLCLWIVGEKGLCLYNSKTLKYDICYTW
         C  TLCLWIVGE+GLC+++ KT  YDICYTW
Subjt:  LC--TLCLWIVGEKGLCLYNSKTLKYDICYTW

A0A314UAG5 S-protein homolog2.5e-3257.39Show/hide
Query:  ICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLC
        I  NV AL     VNITN L     LT+HCKS D DLG H LPPLISY F FRPN+W +T +FCS +WPG+ HY +IY QKRD+D C +C+W++   G C
Subjt:  ICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLC

Query:  LYNSKTLKYDICYTW
        L+N KT  YDICY W
Subjt:  LYNSKTLKYDICYTW

A0A6J1CB24 S-protein homolog4.0e-75100Show/hide
Query:  MAAAPSTSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYN
        MAAAPSTSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYN
Subjt:  MAAAPSTSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYN

Query:  QKRDEDLCTLCLWIVGEKGLCLYNSKTLKYDICYTWPS
        QKRDEDLCTLCLWIVGEKGLCLYNSKTLKYDICYTWPS
Subjt:  QKRDEDLCTLCLWIVGEKGLCLYNSKTLKYDICYTWPS

A0A6J5TDI4 S-protein homolog1.4e-3258.04Show/hide
Query:  NVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLCLYN
        N  AL     VNITN L     LT+HCKS DDDLG H LPPLISY F FRPN+W +T +FCS +WPG+ HY +IY QKRD+D C +C+W++   G CL+N
Subjt:  NVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCTLCLWIVGEKGLCLYN

Query:  SKTLKYDICYTW
         KT  YDICY W
Subjt:  SKTLKYDICYTW

A0A6J5VW08 S-protein homolog1.9e-3254.69Show/hide
Query:  LVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLC
        LV   S  +  + I  NV AL     VNITN L     LT+HCKS DDDLG H LPPLISY F FRPN+W +T +FCS +WPG+ HY +IY QKRD+D C
Subjt:  LVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLC

Query:  TLCLWIVGEKGLCLYNSKTLKYDICYTW
         +C+W++   G CL+N KT  YDICY W
Subjt:  TLCLWIVGEKGLCLYNSKTLKYDICYTW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.0e-1940.18Show/hide
Query:  SARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRD---EDLC--TLCLWIVGEKGLCLYN
        +++ +V I N L +   L  HCKSKDDDLG   L P  S++F F    +  TL+FCSF WP   H F+IY   RD   ++ C    C+W +   G C +N
Subjt:  SARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRD---EDLC--TLCLWIVGEKGLCLYN

Query:  SKTLKYDICYTW
         +T ++D+CY W
Subjt:  SKTLKYDICYTW

F4JZG1 S-protein homolog 43.3e-1841.82Show/hide
Query:  RASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWIS-TLFFCSFQWPGSFHYFEIYNQKRDEDL----CTLCLWIVGEKGLCLYNSK
        ++ V ITN L     L +HCKS DDDLG   L P  S++F FRP++    TLFFC F WPG   +F IY+  RD       C  C+W +G+ G C ++  
Subjt:  RASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWIS-TLFFCSFQWPGSFHYFEIYNQKRDEDL----CTLCLWIVGEKGLCLYNSK

Query:  TLKYDICYTW
           ++ICY W
Subjt:  TLKYDICYTW

O23020 S-protein homolog 57.9e-2038.58Show/hide
Query:  VLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCT
        ++   F +LF +    +        V +TN++     LT+HCKSK DDLG H +P    Y F F+PN+W STLFFCSFQW   F  F+IY+ +RD+ +C 
Subjt:  VLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCT

Query:  LCLWIVGEKGLCLYNSKTLKYDICYTW
         C W +   G C    K      C+ W
Subjt:  LCLWIVGEKGLCLYNSKTLKYDICYTW

P0DN93 S-protein homolog 292.0e-1531.3Show/hide
Query:  STSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDE
        S+ + + LS ++ +     +     A+  V +TN +     LT+ C+SKDDDLG H L    ++ + FRP+ + +TLF C F W  +  +F+ Y   RD+
Subjt:  STSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDE

Query:  DLCTLCLWIVGEKGLCLYNSKTLKYDICYTW
          C  C W +     C+  +   K+D CY W
Subjt:  DLCTLCLWIVGEKGLCLYNSKTLKYDICYTW

Q9FMQ4 S-protein homolog 32.2e-1736.09Show/hide
Query:  LVLSLSFLVLFSTICVNVEA-LSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRD---
        +V+ L   + FS +  + +   S    V ITN L     L +HCKS DDDLG   L P  S++F FR ++  +TLF+C F WPG    F+IY+  RD   
Subjt:  LVLSLSFLVLFSTICVNVEA-LSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRD---

Query:  -EDLCTLCLWIVGEKGLCLYNSKTLKYDICYTW
            C  C+W +  +G C+++     ++ICY W
Subjt:  -EDLCTLCLWIVGEKGLCLYNSKTLKYDICYTW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family5.6e-2138.58Show/hide
Query:  VLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCT
        ++   F +LF +    +        V +TN++     LT+HCKSK DDLG H +P    Y F F+PN+W STLFFCSFQW   F  F+IY+ +RD+ +C 
Subjt:  VLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDLCT

Query:  LCLWIVGEKGLCLYNSKTLKYDICYTW
         C W +   G C    K      C+ W
Subjt:  LCLWIVGEKGLCLYNSKTLKYDICYTW

AT3G16970.1 Plant self-incompatibility protein S1 family9.6e-2140.54Show/hide
Query:  RASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDL----CTLCLWIVGEKGLCLYNSKT
        R +V I N L  H  L  HCKSK+DDLG   +    +++F+FRP+V+  TLFFC F W    H+F+IY Q RD +     C  C W + + G C  N  +
Subjt:  RASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDL----CTLCLWIVGEKGLCLYNSKT

Query:  LKYDICYTWPS
          +D+C  W S
Subjt:  LKYDICYTWPS

AT3G17080.1 Plant self-incompatibility protein S1 family4.3e-2137.4Show/hide
Query:  SLSFLVLFSTICVNVEALSARASVNIT--NILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDL--
        SL   +LF  + + + A+ +RAS ++   N L     L  HCKS++DDLG+  L P  S++F F P+++  TLF+C F W    H F+IY Q RD++   
Subjt:  SLSFLVLFSTICVNVEALSARASVNIT--NILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDEDL--

Query:  --CTLCLWIVGEKGLCLYNSKTLKYDICYTW
          C  C W + + G C +  KT  +D CY+W
Subjt:  --CTLCLWIVGEKGLCLYNSKTLKYDICYTW

AT4G16195.1 Plant self-incompatibility protein S1 family2.1e-2040.18Show/hide
Query:  SARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRD---EDLC--TLCLWIVGEKGLCLYN
        +++ +V I N L +   L  HCKSKDDDLG   L P  S++F F    +  TL+FCSF WP   H F+IY   RD   ++ C    C+W +   G C +N
Subjt:  SARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRD---EDLC--TLCLWIVGEKGLCLYN

Query:  SKTLKYDICYTW
         +T ++D+CY W
Subjt:  SKTLKYDICYTW

AT5G12070.1 Plant self-incompatibility protein S1 family2.4e-1941.82Show/hide
Query:  RASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWIS-TLFFCSFQWPGSFHYFEIYNQKRDEDL----CTLCLWIVGEKGLCLYNSK
        ++ V ITN L     L +HCKS DDDLG   L P  S++F FRP++    TLFFC F WPG   +F IY+  RD       C  C+W +G+ G C ++  
Subjt:  RASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWIS-TLFFCSFQWPGSFHYFEIYNQKRDEDL----CTLCLWIVGEKGLCLYNSK

Query:  TLKYDICYTW
           ++ICY W
Subjt:  TLKYDICYTW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATTACAGACAGCAATGGCAGCAGCTCCCTCAACTTCCTTGGTACTGTCTTTGTCTTTCCTTGTACTGTTCTCAACAATTTGTGTCAATGTAGAAGCATTGTCTGCTCG
AGCTTCAGTGAACATAACAAATATTTTGGAAAGTCACCAACAGCTCACCGTTCATTGTAAATCGAAGGACGACGATCTCGGGTTCCATCAGCTGCCTCCTTTGATCAGCT
ACGCCTTCGATTTTCGACCGAACGTCTGGATTTCGACGCTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTCCACTACTTTGAGATTTACAACCAAAAGAGAGATGAA
GATCTTTGCACTCTTTGTTTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGTACAATAGCAAGACCCTCAAGTACGATATTTGCTATACTTGGCCATCC
mRNA sequenceShow/hide mRNA sequence
TTATTACAGACAGCAATGGCAGCAGCTCCCTCAACTTCCTTGGTACTGTCTTTGTCTTTCCTTGTACTGTTCTCAACAATTTGTGTCAATGTAGAAGCATTGTCTGCTCG
AGCTTCAGTGAACATAACAAATATTTTGGAAAGTCACCAACAGCTCACCGTTCATTGTAAATCGAAGGACGACGATCTCGGGTTCCATCAGCTGCCTCCTTTGATCAGCT
ACGCCTTCGATTTTCGACCGAACGTCTGGATTTCGACGCTGTTCTTCTGCAGCTTCCAGTGGCCTGGCTCCTTCCACTACTTTGAGATTTACAACCAAAAGAGAGATGAA
GATCTTTGCACTCTTTGTTTGTGGATTGTGGGCGAAAAGGGTCTCTGTTTGTACAATAGCAAGACCCTCAAGTACGATATTTGCTATACTTGGCCATCC
Protein sequenceShow/hide protein sequence
LLQTAMAAAPSTSLVLSLSFLVLFSTICVNVEALSARASVNITNILESHQQLTVHCKSKDDDLGFHQLPPLISYAFDFRPNVWISTLFFCSFQWPGSFHYFEIYNQKRDE
DLCTLCLWIVGEKGLCLYNSKTLKYDICYTWPS