CuGenDBv2

Gene ID	MS007805
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L13a
Genome location	scaffold13:1429731..1431211
RNA-Seq Expression	MS007805
Synteny	MS007805
Gene Ontology terms	GO:0017148 - negative regulation of translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR005755 - Ribosomal protein L13, eukaryotic/archaeal IPR005822 - Ribosomal protein L13 IPR023563 - Ribosomal protein L13, conserved site IPR036899 - Ribosomal protein L13 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022138811.1 60S ribosomal protein L13a-4 [Momordica charantia]

4.4e-109

100

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022147118.1 60S ribosomal protein L13a-4-like [Momordica charantia]

1.6e-106

96.6

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA+YEKKKQL KLR+KAEKVA+EKLG QLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022924796.1 60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata]

1.6e-106

96.6

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVV+DARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA+YEKKKQL KLR+KAEKVA+EKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_022964267.1 60S ribosomal protein L13a-4 [Cucurbita moschata]

1.2e-106

96.6

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA+YEKKKQLNKLRIKAEKVAEEKLG QLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

XP_038906567.1 60S ribosomal protein L13a-4 [Benincasa hispida]

1.6e-106

96.6

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPY+KMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA+YE+KKQLNKLRIKAEKVAEEKLG QLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C555 60S ribosomal protein L13a-4

9.8e-107

96.12

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QA+YE+KKQLNKLRIKAEKVAEEKLG QLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1CAT5 60S ribosomal protein L13a-4

2.1e-109

100

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1D0E7 60S ribosomal protein L13a-4-like

7.5e-107

96.6

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA+YEKKKQL KLR+KAEKVA+EKLG QLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1EAG0 60S ribosomal protein L13a-4-like isoform X1

7.5e-107

96.6

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVV+DARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA+YEKKKQL KLR+KAEKVA+EKLG QL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

A0A6J1HHD3 60S ribosomal protein L13a-4

5.7e-107

96.6

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLKAYEGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA+YEKKKQLNKLRIKAEKVAEEKLG QLEV
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        IAPIKY
Subjt:  IAPIKY

SwissProt top hits

e value

%identity

Alignment

O49885 60S ribosomal protein L13a

2.0e-96

84.47

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGI AKRVVVDARHHMLGRLASIVAKELLNGQKVV+VR EEICISGGLVRQKMKY+RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
          ALARLK YEG+PPP+DK KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKER+Q  YE+KKQLNKLR+KAE+VA+EKLGSQL++
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9FKC0 60S ribosomal protein L13a-4

7.5e-104

89.81

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG+QL++
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9LRX8 60S ribosomal protein L13a-2

2.4e-102

89.81

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL KLR KAEKVAEEKLGSQL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +A IKY
Subjt:  IAPIKY

Q9SFU1 60S ribosomal protein L13a-1

1.1e-102

88.83

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +V+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+KLR KAEKVAEEKLGSQL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Q9SVR0 60S ribosomal protein L13a-3

2.4e-102

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLK +EG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQLNKLR KAEKVAEE+LGSQL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Arabidopsis top hits

e value

%identity

Alignment

AT3G07110.1 Ribosomal protein L13 family protein

7.7e-104

88.83

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +V+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        A ALARLK +EGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+KLR KAEKVAEEKLGSQL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT3G24830.1 Ribosomal protein L13 family protein

1.7e-103

89.81

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLK +EGVPPPYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL KLR KAEKVAEEKLGSQL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +A IKY
Subjt:  IAPIKY

AT4G13170.1 Ribosomal protein L13 family protein

1.7e-103

88.35

Show/hide

Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLK +EG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQLNKLR KAEKVAEE+LGSQL+V
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT5G48760.1 Ribosomal protein L13 family protein

5.3e-105

89.81

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG+QL++
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

AT5G48760.2 Ribosomal protein L13 family protein

5.3e-105

89.81

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Query:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG
        MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRG
Subjt:  MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRG

Query:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV
        AAALARLK YEGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQLNKLR+KAEKVAEEKLG+QL++
Subjt:  AAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEV

Query:  IAPIKY
        +AP+KY
Subjt:  IAPIKY

Sequences

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CDS sequence

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ATGGTGTCCGGTTCCGGTATCTGTGCGAAGCGCGTCGTGGTGGACGCAAGGCACCACATGTTGGGAAGGCTCGCTTCGATCGTCGCCAAGGAGCTTCTCAATGGCCAAAA
GGTTGTGCTCGTCAGGTGCGAGGAGATCTGCATCTCCGGCGGATTGGTCCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGGATGAACACCAAGCCCTCCCATG
GCCCCATTCACTTCCGTGCCCCCGCCAAGATCATCTGGCGTACCATTCGTGGGATGATTCCCCATAAGACTAAGCGTGGAGCTGCTGCTCTTGCCCGTTTGAAGGCGTAC
GAGGGTGTTCCTCCCCCGTATGATAAGATGAAGAGGATGGTCATTCCTGATGCTCTTAAGGTCTTGAGGCTTCAAGCCGGCCATAAGTACTGCTTGTTGGGCAGACTTTC
TTCGGAGGTTGGATGGAACCATTATGATACCATCAAGGAACTTGAGAGGAAGAGAAAGGAGAGAGCTCAGGCTTCATATGAGAAAAAGAAGCAGTTAAATAAGCTAAGGA
TTAAAGCCGAGAAGGTTGCTGAGGAGAAGCTCGGTTCCCAACTTGAAGTTATTGCTCCTATCAAATAC

mRNA sequence

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Protein sequence

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MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAY
EGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQASYEKKKQLNKLRIKAEKVAEEKLGSQLEVIAPIKY

MS007805 (gene) of Bitter gourd (TR) v1 genome