; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007822 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007822
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionActin-related protein 2/3 complex subunit 4
Genome locationscaffold13:1547867..1549600
RNA-Seq ExpressionMS007822
SyntenyMS007822
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0051301 - cell division (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR008384 - Actin-related protein 2/3 complex subunit 4
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7837003.1 Actin-related protein 2/3 complex subunit 4 [Senna tora]4.1e-5192.24Show/hide
Query:  LLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFIDIDKEISELKMS
        +LQ+ ICRNE+EKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNYHCEE+QK +LIDFIDIDKEISELKMS
Subjt:  LLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFIDIDKEISELKMS

Query:  VNTRGRLVATEFLKQF
        VNTRGRLVATEFLKQF
Subjt:  VNTRGRLVATEFLKQF

XP_022138538.1 actin-related protein 2/3 complex subunit 4-like isoform X1 [Momordica charantia]8.2e-5293.5Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  ISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI     DIDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQFT
        SELKMSVNTRGRLVA+EFLKQFT
Subjt:  SELKMSVNTRGRLVATEFLKQFT

XP_022138541.1 actin-related protein 2/3 complex subunit 4-like isoform X2 [Momordica charantia]8.2e-5293.5Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  ISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI     DIDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQFT
        SELKMSVNTRGRLVA+EFLKQFT
Subjt:  SELKMSVNTRGRLVATEFLKQFT

XP_022157804.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Momordica charantia]5.3e-5192.62Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        +L  ISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNYHCEELQKQRLIDFI     DIDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
        SELKMSVNTRGRLVATEFLKQF
Subjt:  SELKMSVNTRGRLVATEFLKQF

XP_022157808.1 actin-related protein 2/3 complex subunit 4 isoform X2 [Momordica charantia]5.3e-5192.62Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        +L  ISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNYHCEELQKQRLIDFI     DIDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
        SELKMSVNTRGRLVATEFLKQF
Subjt:  SELKMSVNTRGRLVATEFLKQF

TrEMBL top hitse value%identityAlignment
A0A4Y1QNC6 Protein-binding protein (Fragment)4.4e-5191.45Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFIDIDKEISELKM
        LL Q+ ICRNE+EKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFL+TNYHCEE+QK +LIDFIDIDKEISELKM
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFIDIDKEISELKM

Query:  SVNTRGRLVATEFLKQF
        SVNTRGRLVATEFLKQF
Subjt:  SVNTRGRLVATEFLKQF

A0A6J1C9Q5 Actin-related protein 2/3 complex subunit 44.0e-5293.5Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  ISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI     DIDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQFT
        SELKMSVNTRGRLVA+EFLKQFT
Subjt:  SELKMSVNTRGRLVATEFLKQFT

A0A6J1CA06 actin-related protein 2/3 complex subunit 4-like isoform X24.0e-5293.5Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  ISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI     DIDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQFT
        SELKMSVNTRGRLVA+EFLKQFT
Subjt:  SELKMSVNTRGRLVATEFLKQFT

A0A6J1DUD5 actin-related protein 2/3 complex subunit 4 isoform X22.6e-5192.62Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        +L  ISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNYHCEELQKQRLIDFI     DIDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
        SELKMSVNTRGRLVATEFLKQF
Subjt:  SELKMSVNTRGRLVATEFLKQF

A0A6J1DXL4 Actin-related protein 2/3 complex subunit 42.6e-5192.62Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        +L  ISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNYHCEELQKQRLIDFI     DIDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
        SELKMSVNTRGRLVATEFLKQF
Subjt:  SELKMSVNTRGRLVATEFLKQF

SwissProt top hitse value%identityAlignment
F4JUL9 Actin-related protein 2/3 complex subunit 41.4e-4985.25Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  + ICRNE+EKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNYHCEE+QKQ+LIDFI     DI+KEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
         +LK SVNTRGRLVATEFLKQF
Subjt:  SELKMSVNTRGRLVATEFLKQF

P59998 Actin-related protein 2/3 complex subunit 42.5e-3562.3Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  ++I RNE EK LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H E++ K +L+DF+     +IDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
        SE+K+SVN R R+VA EFLK F
Subjt:  SELKMSVNTRGRLVATEFLKQF

P59999 Actin-related protein 2/3 complex subunit 42.5e-3562.3Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  ++I RNE EK LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H E++ K +L+DF+     +IDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
        SE+K+SVN R R+VA EFLK F
Subjt:  SELKMSVNTRGRLVATEFLKQF

Q148J6 Actin-related protein 2/3 complex subunit 42.5e-3562.3Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  ++I RNE EK LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H E++ K +L+DF+     +IDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
        SE+K+SVN R R+VA EFLK F
Subjt:  SELKMSVNTRGRLVATEFLKQF

Q641G7 Actin-related protein 2/3 complex subunit 45.5e-3562.3Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  + I RNE EK LIE SINS+R+S+ VKQ DE+E IL  KF+RF+ MRAE F +LRRKPV+GYDISFLITN+H E++ K +L+DF+     +IDKEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
        SE+K+SVN R R+VA EFLK F
Subjt:  SELKMSVNTRGRLVATEFLKQF

Arabidopsis top hitse value%identityAlignment
AT4G14147.1 protein binding9.6e-5185.25Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI
        LL  + ICRNE+EKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNYHCEE+QKQ+LIDFI     DI+KEI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI-----DIDKEI

Query:  SELKMSVNTRGRLVATEFLKQF
         +LK SVNTRGRLVATEFLKQF
Subjt:  SELKMSVNTRGRLVATEFLKQF

AT4G14147.2 protein binding5.0e-3989.89Show/hide
Query:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI
        LL  + ICRNE+EKCLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAF+VLRRKPVQGYDISFLITNYHCEE+QKQ+LIDFI
Subjt:  LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGCTCTTGCAGATCTCAATATGTAGAAATGAATCAGAGAAGTGTTTGATTGAGACATCTATAAACTCACTTCGCATAAGTCTCAAGGTTAAGCAGACAGATGAACTGGA
GAACATTTTAACTAAGAAGTTCCTTCGATTTTTGTCAATGCGGGCAGAAGCTTTTAAGGTTCTGAGACGAAAACCCGTACAGGGATATGATATTAGCTTTCTCATCACAA
ACTATCACTGTGAGGAGTTGCAGAAGCAAAGACTCATTGATTTCATTGATATTGATAAAGAGATCAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTCGTAGCA
ACAGAGTTTCTAAAGCAATTCACT
mRNA sequenceShow/hide mRNA sequence
TTGCTCTTGCAGATCTCAATATGTAGAAATGAATCAGAGAAGTGTTTGATTGAGACATCTATAAACTCACTTCGCATAAGTCTCAAGGTTAAGCAGACAGATGAACTGGA
GAACATTTTAACTAAGAAGTTCCTTCGATTTTTGTCAATGCGGGCAGAAGCTTTTAAGGTTCTGAGACGAAAACCCGTACAGGGATATGATATTAGCTTTCTCATCACAA
ACTATCACTGTGAGGAGTTGCAGAAGCAAAGACTCATTGATTTCATTGATATTGATAAAGAGATCAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTCGTAGCA
ACAGAGTTTCTAAAGCAATTCACT
Protein sequenceShow/hide protein sequence
LLLQISICRNESEKCLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFKVLRRKPVQGYDISFLITNYHCEELQKQRLIDFIDIDKEISELKMSVNTRGRLVA
TEFLKQFT