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MS007865 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007865
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description10 kDa chaperonin 1, chloroplastic-like
Genome locationscaffold13:1913131..1916300
RNA-Seq ExpressionMS007865
SyntenyMS007865
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574824.1 10 kDa chaperonin 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-3969.92Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MAS F T+KP+++KID PT  N+R+QSTRRTSL+VCAV+KKLE AKVVPQGDRVLIRLEELP+KSAGGVLLPKSAVKFERYLLGE+    + +       
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
        K       +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
XP_022155782.1 10 kDa chaperonin 1, chloroplastic-like [Momordica charantia]2.5e-4980.74Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGE+    + + + ++E 
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKL----RQSLCVDLGTDAKHVFCKASDLLAVVE
          K+      +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKL----RQSLCVDLGTDAKHVFCKASDLLAVVE
XP_022958987.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita moschata]4.7e-4070.68Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MAS F T+KPF++KID  T  N+R+QSTRRTSL+VCAV+KKLEPAKVVPQGDRVLIRLEELP+KSAGGVLLPKSAVKFERYLLGE+    + +       
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
        K       +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
XP_023006781.1 10 kDa chaperonin 1, chloroplastic-like [Cucurbita maxima]5.5e-4171.43Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MAS F T+KPF++KID PT  N+R+QSTRRTSL+VCAV+KKLEPAKVVPQGDRVLIRLEELP+KSAGGVLLPKSAVKFERYLLGE+    + +       
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
        K       +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
XP_038906447.1 10 kDa chaperonin 1, chloroplastic-like [Benincasa hispida]2.5e-4172.93Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MAS F T+KPF++KIDAPT  NQRL STRRTSL+VCAVAKKLEP KVVPQGDRVLIRLEELP+KSAGGVLLPKSAVKFERYLLGE+    + +       
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
        K       +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
TrEMBL top hitse value%identityAlignment
A0A0A0KET7 Uncharacterized protein1.1e-3969.92Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MAS F T+KPF++K + PT  NQRL STRR SL+VCAV KKLEPAKVVPQGDRVLIRLEELP+KSAGGVLLPKSAVKFERYLLGE+    + +       
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
        K       +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
A0A5D3DLT2 Chloroplast chaperonin1.1e-3969.92Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MAS F T+KPF++K + PT  NQRL STRR SL+VCAV KKLEPAKVVPQGDRVLIRLEELP+KSAGGVLLPKSAVKFERYLLGE+    + +       
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
        K       +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
A0A6J1DQA5 10 kDa chaperonin 1, chloroplastic-like1.2e-4980.74Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGE+    + + + ++E 
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKL----RQSLCVDLGTDAKHVFCKASDLLAVVE
          K+      +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKL----RQSLCVDLGTDAKHVFCKASDLLAVVE
A0A6J1H3B8 10 kDa chaperonin 1, chloroplastic-like2.3e-4070.68Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MAS F T+KPF++KID  T  N+R+QSTRRTSL+VCAV+KKLEPAKVVPQGDRVLIRLEELP+KSAGGVLLPKSAVKFERYLLGE+    + +       
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
        K       +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
A0A6J1KWR7 10 kDa chaperonin 1, chloroplastic-like2.7e-4171.43Show/hide
Query:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES
        MAS F T+KPF++KID PT  N+R+QSTRRTSL+VCAV+KKLEPAKVVPQGDRVLIRLEELP+KSAGGVLLPKSAVKFERYLLGE+    + +       
Subjt:  MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMES

Query:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
        K       +  VDLGTDAKHVFCKASDLLAVVE
Subjt:  KTKLR--QSLCVDLGTDAKHVFCKASDLLAVVE
SwissProt top hitse value%identityAlignment
O80504 10 kDa chaperonin 2, chloroplastic3.6e-2752.52Show/hide
Query:  MASTFFTLKP-----FISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKS
        MASTF    P     F  K   P++ N  L  +RR  LR+ A++ K EP KVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL GE+  + S    
Subjt:  MASTFFTLKP-----FISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKS

Query:  AKMESKTKLRQSLC---VDLGTDAKHVFCKASDLLAVVE
             K  L   +    VDLGTDA+H FCK SDLLA+VE
Subjt:  AKMESKTKLRQSLC---VDLGTDAKHVFCKASDLLAVVE
Q9M1C2 10 kDa chaperonin 1, chloroplastic3.8e-2957.25Show/hide
Query:  MASTFFTL-KPFIS---KIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSA
        MAS+F T+ KPF+S   K +APT   Q L   RR S R+ AV+ K EPAKVVPQ DRVL+RLE LP+KS+GGVLLPKSAVKFERYL GEV  + S     
Subjt:  MASTFFTL-KPFIS---KIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSA

Query:  KMESKTKLRQSLC--VDLGT-DAKHVFCKASDLLAVVE
        +   K          VD GT DAKH FCK SDLLA+V+
Subjt:  KMESKTKLRQSLC--VDLGT-DAKHVFCKASDLLAVVE
Arabidopsis top hitse value%identityAlignment
AT2G44650.1 chloroplast chaperonin 102.6e-2852.52Show/hide
Query:  MASTFFTLKP-----FISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKS
        MASTF    P     F  K   P++ N  L  +RR  LR+ A++ K EP KVVPQ DRVL+RLE+LP KS+GGVLLPK+AVKFERYL GE+  + S    
Subjt:  MASTFFTLKP-----FISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKS

Query:  AKMESKTKLRQSLC---VDLGTDAKHVFCKASDLLAVVE
             K  L   +    VDLGTDA+H FCK SDLLA+VE
Subjt:  AKMESKTKLRQSLC---VDLGTDAKHVFCKASDLLAVVE
AT3G60210.1 GroES-like family protein2.7e-3057.25Show/hide
Query:  MASTFFTL-KPFIS---KIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSA
        MAS+F T+ KPF+S   K +APT   Q L   RR S R+ AV+ K EPAKVVPQ DRVL+RLE LP+KS+GGVLLPKSAVKFERYL GEV  + S     
Subjt:  MASTFFTL-KPFIS---KIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSA

Query:  KMESKTKLRQSLC--VDLGT-DAKHVFCKASDLLAVVE
        +   K          VD GT DAKH FCK SDLLA+V+
Subjt:  KMESKTKLRQSLC--VDLGT-DAKHVFCKASDLLAVVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTACTTTCTTCACTCTGAAGCCTTTCATAAGCAAAATCGATGCACCCACTTCGTGGAATCAGAGATTACAGAGCACTCGGAGAACTTCCCTTAGAGTCTGTGC
AGTGGCGAAGAAATTGGAACCCGCCAAGGTTGTTCCTCAAGGTGATAGAGTCCTCATTCGGCTGGAGGAGCTTCCTGATAAATCAGCAGGCGGAGTTTTGTTACCCAAGT
CAGCTGTTAAATTCGAGCGTTATCTTTTGGGAGAAGTAAGTGAAATTCCTTCCTTCTCCAAATCTGCTAAGATGGAAAGCAAAACAAAACTGCGGCAGTCCCTTTGTGTG
GATTTAGGTACAGATGCAAAGCATGTCTTCTGCAAAGCAAGTGATTTGCTGGCTGTAGTTGAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCTACTTTCTTCACTCTGAAGCCTTTCATAAGCAAAATCGATGCACCCACTTCGTGGAATCAGAGATTACAGAGCACTCGGAGAACTTCCCTTAGAGTCTGTGC
AGTGGCGAAGAAATTGGAACCCGCCAAGGTTGTTCCTCAAGGTGATAGAGTCCTCATTCGGCTGGAGGAGCTTCCTGATAAATCAGCAGGCGGAGTTTTGTTACCCAAGT
CAGCTGTTAAATTCGAGCGTTATCTTTTGGGAGAAGTAAGTGAAATTCCTTCCTTCTCCAAATCTGCTAAGATGGAAAGCAAAACAAAACTGCGGCAGTCCCTTTGTGTG
GATTTAGGTACAGATGCAAAGCATGTCTTCTGCAAAGCAAGTGATTTGCTGGCTGTAGTTGAG
Protein sequenceShow/hide protein sequence
MASTFFTLKPFISKIDAPTSWNQRLQSTRRTSLRVCAVAKKLEPAKVVPQGDRVLIRLEELPDKSAGGVLLPKSAVKFERYLLGEVSEIPSFSKSAKMESKTKLRQSLCV
DLGTDAKHVFCKASDLLAVVE