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MS007878 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007878
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionHeat shock protein DnaJ
Genome locationscaffold13:2025786..2027464
RNA-Seq ExpressionMS007878
SyntenyMS007878
Gene Ontology termsNA
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039964.1 protein SPA [Cucumis melo var. makuwa]6.4e-6471.75Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAAR   ++   VQLKATDSNGVT  P RN T  PRLSIPKPSWIV+TE                     SNVRREKRKKPDPPCV CNGSGRVDCHHCC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSAD
        GRGRTNF HLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNE++D KK ++Q  +QH  SA+
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSAD

XP_008460069.1 PREDICTED: uncharacterized protein LOC103498991 [Cucumis melo]1.9e-6371.75Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAAR   ++   VQLKATDSNGVT  P RN T  PRLSIPKPSWIV+TE                     SNVRREKRKKPDPPCV CNGSGRVDCHHCC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSAD
        GRGRTNF HLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNE++D KK  +Q  +QH  SA+
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSAD

XP_022155760.1 uncharacterized protein LOC111022804 [Momordica charantia]5.0e-8586.67Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAARAPIVL AVVQLKATDSNGVTPPPPRN TPFPRLSIPKPSWIVKTE                     SNVRREKRKKPDPPCVKCNGSGRVDCHHCC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL
        GRGRTNF HLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL

XP_023513705.1 uncharacterized protein LOC111778233 [Cucurbita pepo subsp. pepo]8.3e-6469.57Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAAR   ++   +QLKATDSNGV   PP N T FPRLSIPKPSWIV+TE                     SNVRREKRKKPDPPC  C+GSGRVDCH CC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMEN--NETEDLKKNENQANQQHH--RSADSLL
        GRGRTNF HLEMLPKGEWPKWCR CGGSGLGYCSRCLGTGEYRYIMGFQFMKME+  NET+D+ K ENQ NQQH   R A+SLL
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMEN--NETEDLKKNENQANQQHH--RSADSLL

XP_038906930.1 uncharacterized protein LOC120092800 [Benincasa hispida]1.7e-6976.54Show/hide
Query:  AARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCCG
        A   PIVL A VQLKATDSNGVT  PPRN TP PRLSIPKPSWIV+TE                     SNVRREKRKKPDPPCV CNGSGRVDCHHCCG
Subjt:  AARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCCG

Query:  RGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL
        RGRTNF HLEMLPKG+WP+WCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNET+DLKK E+Q  +QH RSADSLL
Subjt:  RGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL

TrEMBL top hitse value%identityAlignment
A0A1S3CCX7 uncharacterized protein LOC1034989919.0e-6471.75Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAAR   ++   VQLKATDSNGVT  P RN T  PRLSIPKPSWIV+TE                     SNVRREKRKKPDPPCV CNGSGRVDCHHCC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSAD
        GRGRTNF HLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNE++D KK  +Q  +QH  SA+
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSAD

A0A5D3DLS3 Protein SPA3.1e-6471.75Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAAR   ++   VQLKATDSNGVT  P RN T  PRLSIPKPSWIV+TE                     SNVRREKRKKPDPPCV CNGSGRVDCHHCC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSAD
        GRGRTNF HLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNE++D KK ++Q  +QH  SA+
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSAD

A0A6J1DNB8 uncharacterized protein LOC1110228042.4e-8586.67Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAARAPIVL AVVQLKATDSNGVTPPPPRN TPFPRLSIPKPSWIVKTE                     SNVRREKRKKPDPPCVKCNGSGRVDCHHCC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL
        GRGRTNF HLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL

A0A6J1HHM2 uncharacterized protein LOC1114644011.4e-6168.48Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAAR   ++   VQLKATDSNGV   PP N T FPRLSIPKPSWIV+TE                     SNVRREKRKKPDPPC  C+GSGRVDCH CC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMEN--NETEDLKKNENQANQQHH--RSADSLL
        GRGRTN  HLEMLPKGEWPKWCR CGGSGLGYCSRCLGTGEYRYIMGFQFMKME+  NET+D+ K ENQ NQQ      A+SLL
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMEN--NETEDLKKNENQANQQHH--RSADSLL

A0A6J1KM14 uncharacterized protein LOC1114945091.3e-6268.48Show/hide
Query:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC
        MAA    ++   +QLKATDSNGV   PP N T FPRLSIPKPSWIV+TE                     SNVRREKRKKPDPPC  C+GSGRVDCH+CC
Subjt:  MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCC

Query:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMEN--NETEDLKKNENQANQQHH--RSADSLL
        GRGRTNF HLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTG+YRYIMGFQFMKME+  NET+D+ K ENQ NQQ    R A+SLL
Subjt:  GRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMEN--NETEDLKKNENQANQQHH--RSADSLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17668.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein2.1e-3352.07Show/hide
Query:  RLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCCGRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSR
        RL + KPSWIV+T                     QS  +   + K    CV C+GSGRVDC +CCG+GRTN   +EMLP+GEWPKWC++CGGSGL  CSR
Subjt:  RLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCCGRGRTNFAHLEMLPKGEWPKWCRTCGGSGLGYCSR

Query:  CLGTGEYRYIMGFQFMKMENN
        CLGTGEYRYIMGF+F+   ++
Subjt:  CLGTGEYRYIMGFQFMKMENN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCGAGAGCGCCGATCGTTCTCACGGCGGTCGTTCAATTGAAAGCCACAGATTCAAATGGCGTAACTCCTCCTCCTCCTCGGAACTTGACCCCTTTTCCCCGTCT
CTCAATTCCAAAGCCTTCTTGGATCGTCAAAACGGAGAGGTTACGAGTTAGTTTGTTTTCTTGGTCATTCTCATGGTGGTGTTTCCTCTTTTTATTGCAGTCAAATGTTA
GGAGAGAAAAAAGAAAGAAGCCAGATCCACCTTGTGTGAAATGCAATGGAAGTGGAAGAGTTGACTGTCACCATTGTTGTGGAAGAGGGAGGACAAATTTTGCTCACCTA
GAAATGCTTCCAAAAGGGGAATGGCCAAAATGGTGCAGGACCTGTGGTGGAAGTGGTCTCGGCTATTGCTCTCGATGCCTCGGGACGGGGGAGTACAGGTATATTATGGG
CTTCCAATTCATGAAGATGGAGAACAATGAAACTGAAGATCTCAAGAAGAATGAGAATCAAGCCAACCAACAACATCACAGAAGTGCAGACTCCCTTCTA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCGAGAGCGCCGATCGTTCTCACGGCGGTCGTTCAATTGAAAGCCACAGATTCAAATGGCGTAACTCCTCCTCCTCCTCGGAACTTGACCCCTTTTCCCCGTCT
CTCAATTCCAAAGCCTTCTTGGATCGTCAAAACGGAGAGGTTACGAGTTAGTTTGTTTTCTTGGTCATTCTCATGGTGGTGTTTCCTCTTTTTATTGCAGTCAAATGTTA
GGAGAGAAAAAAGAAAGAAGCCAGATCCACCTTGTGTGAAATGCAATGGAAGTGGAAGAGTTGACTGTCACCATTGTTGTGGAAGAGGGAGGACAAATTTTGCTCACCTA
GAAATGCTTCCAAAAGGGGAATGGCCAAAATGGTGCAGGACCTGTGGTGGAAGTGGTCTCGGCTATTGCTCTCGATGCCTCGGGACGGGGGAGTACAGGTATATTATGGG
CTTCCAATTCATGAAGATGGAGAACAATGAAACTGAAGATCTCAAGAAGAATGAGAATCAAGCCAACCAACAACATCACAGAAGTGCAGACTCCCTTCTA
Protein sequenceShow/hide protein sequence
MAARAPIVLTAVVQLKATDSNGVTPPPPRNLTPFPRLSIPKPSWIVKTERLRVSLFSWSFSWWCFLFLLQSNVRREKRKKPDPPCVKCNGSGRVDCHHCCGRGRTNFAHL
EMLPKGEWPKWCRTCGGSGLGYCSRCLGTGEYRYIMGFQFMKMENNETEDLKKNENQANQQHHRSADSLL