CuGenDBv2

Gene ID	MS007880
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Genome location	scaffold13:2031155..2032082
RNA-Seq Expression	MS007880
Synteny	MS007880
Gene Ontology terms	GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0005743 - mitochondrial inner membrane (cellular component)
InterPro domains	IPR007523 - NDUFAF3/Mth938 domain-containing protein IPR036748 - MTH938-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022964366.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita moschata]

4.2e-52

70.06

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVGNLLMSWSP+KFSEIT ESLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQI+RPIP++          LG    ++ +N +++ F  S  + L   +S R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

XP_023000217.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita maxima]

8.0e-51

68.86

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ YTETGFTVNG+DYEGSLLCVG+LLMSWSP+KFSEIT ESLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQI+RPIP++          LG    ++ +N +++ F  S  + L   +S R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

XP_023513625.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita pepo subsp. pepo]

4.2e-52

70.06

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVGNLLMSWSP+KFSEIT ESLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQI+RPIP++          LG    ++ +N +++ F  S  + L   +S R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

XP_031743290.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]

1.2e-49

67.07

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLPNLIR+L+ DRR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+P+KFSEIT++SLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQIVRPIP++          LG     + +N +++ F  S  + L   ++ R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

XP_038906819.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida]

1.2e-51

70.66

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLPNLIRSLR DRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSP+KFSEIT ESLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQIVRPIP++          LG     + +N +++ F  S  + L   ++ R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CB84 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

3.6e-49

66.47

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLP+LIR+L+ DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSP+KFSEIT +SLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQIVRPIP++          LG     + +N +++ F  S  + L   ++ R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

A0A5A7TES8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

3.6e-49

66.47

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLP+LIR+L+ DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSP+KFSEIT +SLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQIVRPIP++          LG     + +N +++ F  S  + L   ++ R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

A0A5D3DLM8 NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex assembly factor 3-like

6.2e-49

90.83

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLP+LIR+L+ DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSP+KFSEIT +SLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIP
        IFQIVRPIP
Subjt:  IFQIVRPIP

A0A6J1HIQ3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

2.0e-52

70.06

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVGNLLMSWSP+KFSEIT ESLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQI+RPIP++          LG    ++ +N +++ F  S  + L   +S R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

A0A6J1KD25 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3

3.9e-51

68.86

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS
        MAARQKAVATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ YTETGFTVNG+DYEGSLLCVG+LLMSWSP+KFSEIT ESLS
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLS

Query:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        IFQI+RPIP++          LG    ++ +N +++ F  S  + L   +S R     Y+ I+ EEG
Subjt:  IFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G44525.1 Protein of unknown function (DUF498/DUF598)

7.2e-42

77.68

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Query:  MAARQKAVATLPNLIRSLRKDRRRPGLSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESL
        MA R K++ATLP LI+S+RK+   P  S P LPSLRRAFSLYDQINLIDNVPEDQLRFQ + +T FTVNGV YEGSLLCVGNLLMSWSPRKFSEIT +SL
Subjt:  MAARQKAVATLPNLIRSLRKDRRRPGLSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESL

Query:  SIFQIVRPIPDL
        SIFQ VRPIP+L
Subjt:  SIFQIVRPIPDL

AT3G60150.1 Protein of unknown function (DUF498/DUF598)

3.6e-41

58.93

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Query:  MAARQKAVATLPNLIRSLRKD-RRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESL
        MA RQKA+ATLP LI+S+R +  ++P L   LPSLRRAFSLYDQINLIDNVPEDQLRFQ + ET FTVNGV YEGSLLCVGNLLMSWSPR FS+IT +SL
Subjt:  MAARQKAVATLPNLIRSLRKD-RRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESL

Query:  SIFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG
        SIFQ VRPIP+L          +G       LN +++ F  S  + L   +S R     Y+ I+ EEG
Subjt:  SIFQIVRPIPDLEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEG

Sequences

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CDS sequence

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ATGGCGGCGAGACAGAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTCAGAAAGGATCGCCGGAGGCCCGGTCTCAGCCAGCCTCTGCCGTCGTTGAGACGCGC
TTTTTCACTTTACGATCAGATCAATCTCATCGACAATGTTCCCGAAGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGTTTTACGGTAAACGGAGTGGATTATGAAG
GGAGCTTGCTCTGCGTTGGGAACTTGTTAATGTCGTGGAGTCCCAGGAAATTTTCGGAGATTACGGCTGAGAGTTTGTCTATCTTCCAGATTGTGCGGCCTATTCCAGAT
TTAGAGTTTGGGGAATTTGAAGCATGTACCAAATTGGGAATGTGGATGAGTCTTAAGTTCTTAAACAAGAAGATTAAGGTCTTTTTCTTCTCTTTCTCTCTCTCTCTCTC
CATTTCTGAATCTGATAGGCAAATATATCCTCCATATGATTTCATTATGCTAGAAGAGGGAATAGGACCACAGGAGATGGCACCTGGGTCAGTT

mRNA sequence

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Protein sequence

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MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESLSIFQIVRPIPD
LEFGEFEACTKLGMWMSLKFLNKKIKVFFFSFSLSLSISESDRQIYPPYDFIMLEEGIGPQEMAPGSV

MS007880 (gene) of Bitter gourd (TR) v1 genome