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MS007891 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007891
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTubulin-specific chaperone A
Genome locationscaffold13:2142049..2144065
RNA-Seq ExpressionMS007891
SyntenyMS007891
Gene Ontology termsGO:0007021 - tubulin complex assembly (biological process)
GO:0007023 - post-chaperonin tubulin folding pathway (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0048487 - beta-tubulin binding (molecular function)
InterPro domainsIPR004226 - Tubulin binding cofactor A
IPR036126 - Tubulin binding cofactor A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155762.1 tubulin-folding cofactor A [Momordica charantia]1.7e-5199.12Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFD+ARST
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        ISEVENFLKTTEE
Subjt:  ISEVENFLKTTEE

XP_022959143.1 tubulin-folding cofactor A [Cucurbita moschata]1.3e-4689.38Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLEA+LADLKG L ELE+STQ KGPEF+DARS 
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        I+E+E+FLKTTEE
Subjt:  ISEVENFLKTTEE

XP_023006149.1 tubulin-folding cofactor A [Cucurbita maxima]9.9e-4789.38Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE++LADLKG L ELE+STQ KGPEFDDARS 
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        I+E+E+FLKTTEE
Subjt:  ISEVENFLKTTEE

XP_023548059.1 tubulin-folding cofactor A [Cucurbita pepo subsp. pepo]2.2e-4688.5Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE++LADLKG L ELE+STQ +GPEFDDARS 
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        I+E+E+FLKTTEE
Subjt:  ISEVENFLKTTEE

XP_038907024.1 tubulin-folding cofactor A [Benincasa hispida]5.8e-4789.38Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATV+NLKIKTATCKRIIKELHSYEKEVE EAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE++L DLKGALAELE+STQEKGPEF+DARST
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        I+E+E+FL+TTEE
Subjt:  ISEVENFLKTTEE

TrEMBL top hitse value%identityAlignment
A0A5A7T9L5 Tubulin-specific chaperone A1.2e-4586.73Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATV+NLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE +LADLK ALAELE+ST+EKGPEFDDARST
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        I+++E+FLK TEE
Subjt:  ISEVENFLKTTEE

A0A5D3DLX2 Tubulin-specific chaperone A1.2e-4586.73Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATV+NLKIKTATCKRI+KEL SYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE +LADLK ALAELE+ST+EKGPEFDDARST
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        I+++E+FLK TEE
Subjt:  ISEVENFLKTTEE

A0A6J1DQ83 Tubulin-specific chaperone A8.4e-5299.12Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFD+ARST
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        ISEVENFLKTTEE
Subjt:  ISEVENFLKTTEE

A0A6J1H416 Tubulin-specific chaperone A6.3e-4789.38Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLEA+LADLKG L ELE+STQ KGPEF+DARS 
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        I+E+E+FLKTTEE
Subjt:  ISEVENFLKTTEE

A0A6J1KV46 Tubulin-specific chaperone A4.8e-4789.38Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MATV+NLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMM+PDCHKRLE++LADLKG L ELE+STQ KGPEFDDARS 
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTEE
        I+E+E+FLKTTEE
Subjt:  ISEVENFLKTTEE

SwissProt top hitse value%identityAlignment
O04350 Tubulin-folding cofactor A2.6e-4275.89Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MAT+RNLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMMIPDCHKRLE++LADLK  LAELEE+ +++GPE +DA+ T
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTE
        +++VE    T +
Subjt:  ISEVENFLKTTE

O75347 Tubulin-specific chaperone A1.5e-1342.16Show/hide
Query:  VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISE
        VR +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMMIPDC +RLEA+  DL+  L    E   E+  E+ +AR  +  
Subjt:  VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISE

Query:  VE
        V+
Subjt:  VE

P48428 Tubulin-specific chaperone A9.7e-1341.18Show/hide
Query:  VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISE
        VR +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMMIPDC +RLEA+  DL+  L    E   E+  E+ +AR  +  
Subjt:  VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISE

Query:  VE
        V+
Subjt:  VE

P80585 Tubulin-specific chaperone A4.4e-1343.14Show/hide
Query:  VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISE
        +R +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMMIPDC +RLE + ADL   L    E   E+  E+ +ARS +  
Subjt:  VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISE

Query:  VE
        V+
Subjt:  VE

Q6PEC1 Tubulin-specific chaperone A3.3e-1342.16Show/hide
Query:  VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISE
        VR +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMMIPDC +RLEA+  DL+  L    E   E+  E+ +AR  +  
Subjt:  VRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISE

Query:  VE
        V+
Subjt:  VE

Arabidopsis top hitse value%identityAlignment
AT2G30410.1 tubulin folding cofactor A (KIESEL)1.9e-4375.89Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MAT+RNLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMMIPDCHKRLE++LADLK  LAELEE+ +++GPE +DA+ T
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTE
        +++VE    T +
Subjt:  ISEVENFLKTTE

AT2G30410.2 tubulin folding cofactor A (KIESEL)1.9e-4375.89Show/hide
Query:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST
        MAT+RNLKIKT+TCKRI+KELHSYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMMIPDCHKRLE++LADLK  LAELEE+ +++GPE +DA+ T
Subjt:  MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARST

Query:  ISEVENFLKTTE
        +++VE    T +
Subjt:  ISEVENFLKTTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGTAAGAAATCTGAAGATCAAGACAGCAACCTGCAAACGCATTATCAAGGAGTTGCATTCTTACGAGAAGGAGGTGGAGAGAGAGGCTGCCAAAACAGCTGA
CATGAAAGAAAAGGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGATTCCAGATTGTCACAAGCGTCTGGAGGCCTCCTTAG
CTGATCTGAAAGGAGCATTGGCTGAACTGGAAGAATCTACACAAGAGAAAGGCCCAGAATTCGATGACGCTCGGAGCACGATCTCCGAGGTCGAGAATTTCCTGAAGACA
ACCGAGGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTGTAAGAAATCTGAAGATCAAGACAGCAACCTGCAAACGCATTATCAAGGAGTTGCATTCTTACGAGAAGGAGGTGGAGAGAGAGGCTGCCAAAACAGCTGA
CATGAAAGAAAAGGGAGCTGACCCTTATGACCTTAAGCAACAGGAAAATGTGCTGGCTGAATCAAGGATGATGATTCCAGATTGTCACAAGCGTCTGGAGGCCTCCTTAG
CTGATCTGAAAGGAGCATTGGCTGAACTGGAAGAATCTACACAAGAGAAAGGCCCAGAATTCGATGACGCTCGGAGCACGATCTCCGAGGTCGAGAATTTCCTGAAGACA
ACCGAGGAA
Protein sequenceShow/hide protein sequence
MATVRNLKIKTATCKRIIKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCHKRLEASLADLKGALAELEESTQEKGPEFDDARSTISEVENFLKT
TEE