; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007897 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007897
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L3
Genome locationscaffold13:2185571..2187430
RNA-Seq ExpressionMS007897
SyntenyMS007897
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000597 - Ribosomal protein L3
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR019926 - Ribosomal protein L3, conserved site
IPR019927 - Ribosomal protein L3, bacterial/organelle-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574805.1 50S ribosomal protein L3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.1e-13788.44Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP
        M+V+S SS STS  HPIF+NN SS   SSS +LRTSFLAL P KSHRNN +LR QFPRP T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVP
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP

Query:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG
        VTVVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELFKEGDLVDVSG TIGKGFQGG
Subjt:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG

Query:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        IKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

XP_022155788.1 50S ribosomal protein L3, chloroplastic [Momordica charantia]1.4e-158100Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTV
        MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTV
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTV

Query:  VGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKR
        VGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKR
Subjt:  VGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKR

Query:  HNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        HNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  HNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

XP_022959488.1 50S ribosomal protein L3, chloroplastic-like [Cucurbita moschata]4.5e-13688.1Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP
        M+V+S S  STS  HPIF+NN SS   SSS +LRTSFLAL P KSHRNN +LR QFPRP T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVP
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP

Query:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG
        VTVVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELFKEGDLVDVSG TIGKGFQGG
Subjt:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG

Query:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        IKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

XP_023006396.1 50S ribosomal protein L3, chloroplastic-like [Cucurbita maxima]2.7e-13688.1Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP
        M+V+S SS STS  HPIF+NN SS   SSS +LRTSFLAL P KSHRNN ++R QFPRP T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVP
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP

Query:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG
        VTVVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELFKEGDLVDVSG TIGKGFQGG
Subjt:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG

Query:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        IKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

XP_023547387.1 50S ribosomal protein L3, chloroplastic-like [Cucurbita pepo subsp. pepo]1.7e-13587.76Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP
        M+V+S SS STS  HPIF+NN SS   SSS +LRTSFLAL P KSHRNN ++R QFPRP T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVP
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP

Query:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG
        VTVVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+D FEPNQR+ FNELFKEGDLVDVSG TIGKGFQGG
Subjt:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG

Query:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        IKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

TrEMBL top hitse value%identityAlignment
A0A1S3CBR5 50S ribosomal protein L3, chloroplastic4.1e-13586.78Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSSSSSP----RLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVV
        M+++SFSS S ST HPIF+NNPSSSSS      LRTSFLALP    H+NN  LR  FP   T  R + GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVV
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSSSSSP----RLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVV

Query:  PVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQG
        PVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHL+KAG IPMRHLQEFRL+SVDGFEPNQR+ FNELFKEGDLVDVSG TIGKGFQG
Subjt:  PVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQG

Query:  GIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        GIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVKID+DLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  GIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1DNV5 50S ribosomal protein L3, chloroplastic7.0e-159100Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTV
        MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTV
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTV

Query:  VGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKR
        VGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKR
Subjt:  VGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKR

Query:  HNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        HNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  HNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1H630 50S ribosomal protein L3, chloroplastic-like2.2e-13688.1Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP
        M+V+S S  STS  HPIF+NN SS   SSS +LRTSFLAL P KSHRNN +LR QFPRP T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVP
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP

Query:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG
        VTVVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELFKEGDLVDVSG TIGKGFQGG
Subjt:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG

Query:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        IKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1KIF2 50S ribosomal protein L3, chloroplastic-like2.1e-13487.67Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSSSSSP-RLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
        M+ + FSS STS  HPIF+NN SSSSS  RLRTSFLAL P KSH N+ +LRLQFP   T  RTN+G+ +CMSMEAGIGVMATKLGMMSFFEPDGKVVPVT
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSSSSSP-RLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVT

Query:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIK
        VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHL+KAG IPMRHLQEFRL +VDGFEPNQR+ FNELFKEGDLVDVSGITIGKGFQGGIK
Subjt:  VVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIK

Query:  RHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        RHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVK+DD+LNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  RHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

A0A6J1KXN5 50S ribosomal protein L3, chloroplastic-like1.3e-13688.1Show/hide
Query:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP
        M+V+S SS STS  HPIF+NN SS   SSS +LRTSFLAL P KSHRNN ++R QFPRP T  R N GLS+CMSMEAGIGVMATKLGMMSFFEPDGKVVP
Subjt:  MAVVSFSSPSTSTSHPIFSNNPSS---SSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVP

Query:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG
        VTVVGFKEGNIVTQ+KTEATDGYSAVQVGYRRVRDRKLTKPE+GHLQKAG IPMRHLQEFRL+S+DGFEPNQR+ FNELFKEGDLVDVSG TIGKGFQGG
Subjt:  VTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGG

Query:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        IKRHNFKRGPM+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTK KIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
Subjt:  IKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

SwissProt top hitse value%identityAlignment
B0C1D3 50S ribosomal protein L35.3e-6356.81Show/hide
Query:  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFN
        +G++ TKLGM   F+  G+ +PVTVV  + G   VTQ+KT  TDGY+A+Q+GY    ++ LT+PELGHL+K+G  P+RHLQE+RL  V  +E  Q +   
Subjt:  IGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNI-VTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFN

Query:  ELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGN
        +LF EG LVD+SG +IG+GF G  KRHNF+RGPM HGSK+HRA GS GAGTTPGR+Y GK+M G+MG  K  IRKL +V++D + NV++IKG+VPGKPG 
Subjt:  ELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGN

Query:  LLRIAPAKIVGKN
        LL I PA IVG++
Subjt:  LLRIAPAKIVGKN

B1XJT9 50S ribosomal protein L36.9e-6357.28Show/hide
Query:  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDF
        +G++ TKLGM   F+ + G  +PVTVV  + G   VTQ+KT  TDGY++VQ+GY  V+++ LTKP+LGHL+KA   P+RHL+E+RL  V G+E  Q +  
Subjt:  IGVMATKLGMMSFFEPD-GKVVPVTVVGFKEGN-IVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDF

Query:  NELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPG
        N +F+ G +VDVSG TIG+GF G  KRHNFKRG M+HGSK+HR  GS GAGTTPGRVY GK+M GR GGTK  +RKL++V++D++ N+++IKGA+PGK G
Subjt:  NELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPG

Query:  NLLRIAPAKIVGK
        NLL IAP+ IVG+
Subjt:  NLLRIAPAKIVGK

O80360 50S ribosomal protein L3, chloroplastic (Fragment)7.6e-11077.86Show/hide
Query:  LRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRR
        L+T+ L L  P  HR    LR       T+   +   SI  S+EAG+GVMATKLGMMSFFE  G VVPVTVVGF+EGNIVTQ+KTEATDGY+AVQVGYRR
Subjt:  LRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRR

Query:  VRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGR
        VRDRKLTKPE+GHL+K+G+IP+RHLQEFRLQS+DGFE  Q++DF ELFKEGDLVDVSG TIGKGFQGGIKRHNFKRG M+HGSKSHR LGSIGAGTTPGR
Subjt:  VRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGR

Query:  VYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        VYKGKKMPGRMGGTK KIRKLKIVKIDD LN++MIKGA+PGKPGNLLRIAPAKIVGKNIPK+
Subjt:  VYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

P82191 50S ribosomal protein L3, chloroplastic2.3e-10672.85Show/hide
Query:  SFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT---RTNHGLSI-CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTV
        S SSP   +     +  P   S  RL TSF+  P       N  ++L+   PS +T   R   GL I  MS++AGIGVM TKLGMMSFFE DG VVPVTV
Subjt:  SFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTAT---RTNHGLSI-CMSMEAGIGVMATKLGMMSFFEPDGKVVPVTV

Query:  VGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKR
        +GFKEGNIVTQVKTE+TDGY+AVQVGY R+RDRKLT PE GHL KAGVIPMRHLQEFRL SVD F P+Q++ F ELFKEGD+VD+SG TIGKGFQGGIKR
Subjt:  VGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKR

Query:  HNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN
        HNFKRG M+HGSKSHRALGSIGAGTTPG VYKGKKMPGRMGGTKTKIRKLKI+KID DL VVMIKGAVPGKPGNLLR+APAKIVGKNIPKN
Subjt:  HNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN

Q9SKX4 50S ribosomal protein L3-1, chloroplastic5.1e-10683.93Show/hide
Query:  ICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEP
        +  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY AVQ+GYRRVRD+KLTKPE GHLQKAG IPMRHLQEFRL +++GFEP
Subjt:  ICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEP

Query:  NQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGA
        NQ++ F+E+FKEGDLVDV+G TIGKGFQGGIKRH+FKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT+TKIRKLKIVK+D +LNVVMIKGA
Subjt:  NQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGA

Query:  VPGKPGNLLRIAPAKIVGKNIPKN
        +PGKPGNLLRI PAKIVG NIPKN
Subjt:  VPGKPGNLLRIAPAKIVGKNIPKN

Arabidopsis top hitse value%identityAlignment
AT2G43030.1 Ribosomal protein L3 family protein3.6e-10783.93Show/hide
Query:  ICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEP
        +  SMEAGIGVM +KLGMMSFFE DG VVPVTVVGF+EGNIVTQ+KT ATDGY AVQ+GYRRVRD+KLTKPE GHLQKAG IPMRHLQEFRL +++GFEP
Subjt:  ICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEP

Query:  NQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGA
        NQ++ F+E+FKEGDLVDV+G TIGKGFQGGIKRH+FKRG M+HGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGT+TKIRKLKIVK+D +LNVVMIKGA
Subjt:  NQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGA

Query:  VPGKPGNLLRIAPAKIVGKNIPKN
        +PGKPGNLLRI PAKIVG NIPKN
Subjt:  VPGKPGNLLRIAPAKIVGKNIPKN

AT3G17465.1 ribosomal protein L3 plastid2.0e-3340.29Show/hide
Query:  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNEL
        G++A K GM + ++  GK +P++++ + + NIV+QVKT   +G  A+Q+G  + + + L+K  +GH +  GV   R L+EF + + D   P         
Subjt:  GVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNEL

Query:  FKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNL
        F  G  VDV+GIT GKGFQG +KRH F   P SHG S SHR+ GS G    PG+V+KG+KM GRMG  +  ++ + + KID   N++ ++G VPG  GN 
Subjt:  FKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNL

Query:  LRIAPA
        + I  A
Subjt:  LRIAPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGTATCATTTTCATCACCTTCAACCTCAACAAGCCATCCCATCTTCAGCAACAATCCTTCTTCTTCTTCATCTCCGAGACTCAGAACTTCTTTCCTCGCACT
TCCTCCTCCCAAATCCCACCGCAACAACTTCTCGCTTCGTCTGCAATTTCCTAGGCCAAGCACCGCTACACGCACCAACCATGGCCTGTCAATTTGTATGAGCATGGAGG
CCGGCATTGGAGTAATGGCCACCAAGCTTGGAATGATGAGCTTCTTCGAGCCGGACGGCAAGGTCGTCCCTGTCACCGTCGTCGGTTTCAAGGAAGGCAACATTGTCACG
CAGGTTAAGACGGAGGCCACGGACGGATACAGTGCCGTTCAGGTGGGATATCGTAGGGTTAGGGATCGGAAACTCACCAAACCCGAATTAGGGCACCTCCAGAAAGCGGG
AGTGATTCCTATGCGCCATCTGCAGGAGTTTCGCCTGCAGTCTGTTGATGGATTCGAGCCCAATCAGCGCATGGATTTCAATGAACTCTTCAAGGAGGGTGATCTGGTTG
ATGTCTCCGGCATTACAATTGGAAAGGGATTTCAAGGTGGAATCAAGAGGCATAACTTCAAAAGGGGTCCAATGAGCCACGGTTCGAAGAGCCACAGAGCACTCGGATCA
ATCGGTGCAGGAACTACACCCGGACGCGTGTACAAGGGGAAGAAGATGCCCGGAAGGATGGGAGGAACCAAGACAAAGATCAGAAAACTCAAGATTGTGAAGATTGATGA
TGACCTTAATGTTGTGATGATCAAAGGAGCTGTCCCTGGTAAGCCTGGAAACCTTCTTCGAATAGCCCCTGCAAAGATTGTAGGAAAGAACATTCCTAAGAAT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTCGTATCATTTTCATCACCTTCAACCTCAACAAGCCATCCCATCTTCAGCAACAATCCTTCTTCTTCTTCATCTCCGAGACTCAGAACTTCTTTCCTCGCACT
TCCTCCTCCCAAATCCCACCGCAACAACTTCTCGCTTCGTCTGCAATTTCCTAGGCCAAGCACCGCTACACGCACCAACCATGGCCTGTCAATTTGTATGAGCATGGAGG
CCGGCATTGGAGTAATGGCCACCAAGCTTGGAATGATGAGCTTCTTCGAGCCGGACGGCAAGGTCGTCCCTGTCACCGTCGTCGGTTTCAAGGAAGGCAACATTGTCACG
CAGGTTAAGACGGAGGCCACGGACGGATACAGTGCCGTTCAGGTGGGATATCGTAGGGTTAGGGATCGGAAACTCACCAAACCCGAATTAGGGCACCTCCAGAAAGCGGG
AGTGATTCCTATGCGCCATCTGCAGGAGTTTCGCCTGCAGTCTGTTGATGGATTCGAGCCCAATCAGCGCATGGATTTCAATGAACTCTTCAAGGAGGGTGATCTGGTTG
ATGTCTCCGGCATTACAATTGGAAAGGGATTTCAAGGTGGAATCAAGAGGCATAACTTCAAAAGGGGTCCAATGAGCCACGGTTCGAAGAGCCACAGAGCACTCGGATCA
ATCGGTGCAGGAACTACACCCGGACGCGTGTACAAGGGGAAGAAGATGCCCGGAAGGATGGGAGGAACCAAGACAAAGATCAGAAAACTCAAGATTGTGAAGATTGATGA
TGACCTTAATGTTGTGATGATCAAAGGAGCTGTCCCTGGTAAGCCTGGAAACCTTCTTCGAATAGCCCCTGCAAAGATTGTAGGAAAGAACATTCCTAAGAAT
Protein sequenceShow/hide protein sequence
MAVVSFSSPSTSTSHPIFSNNPSSSSSPRLRTSFLALPPPKSHRNNFSLRLQFPRPSTATRTNHGLSICMSMEAGIGVMATKLGMMSFFEPDGKVVPVTVVGFKEGNIVT
QVKTEATDGYSAVQVGYRRVRDRKLTKPELGHLQKAGVIPMRHLQEFRLQSVDGFEPNQRMDFNELFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMSHGSKSHRALGS
IGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDDDLNVVMIKGAVPGKPGNLLRIAPAKIVGKNIPKN