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MS007920 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007920
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold13:2429033..2429464
RNA-Seq ExpressionMS007920
SyntenyMS007920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040002.1 hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa]1.6e-1755.56Show/hide
Query:  LVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYSR-SDDKVSSYEDRVYDSYDKDGEEELGGDNLEKKAQEF
        +V+ KHRNF++ L EII V KSSRASMFLA NTI+ ILF +K+KR S  E E     ++  SR SD +++S E    +    +G EE   D+LEKKAQEF
Subjt:  LVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYSR-SDDKVSSYEDRVYDSYDKDGEEELGGDNLEKKAQEF

Query:  IDMMNSFWREELVYDRF
        IDMMN+FWREEL++DRF
Subjt:  IDMMNSFWREELVYDRF

KAE8646698.1 hypothetical protein Csa_005140 [Cucumis sativus]3.6e-1751.02Show/hide
Query:  MKNLYIFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYS--RSDDKVSSY
        MK L +   + LC  I LSFF +    +V+F HRN +    EI+ V KSSRAS+FLA NTII ILF +K+K+ S  E E  E  ++  S    D +++SY
Subjt:  MKNLYIFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYS--RSDDKVSSY

Query:  E-DRVYDSYDKD-GEEELGGDNLEKKAQEFIDMMNSFWREELVYDRF
        E   V DS D+D  EE +  D+LEKKAQEFIDMMN+FWREEL++DRF
Subjt:  E-DRVYDSYDKD-GEEELGGDNLEKKAQEFIDMMNSFWREELVYDRF

KAF3439977.1 hypothetical protein FNV43_RR18255 [Rhamnella rubrinervis]8.3e-0631.84Show/hide
Query:  MKNLYIFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRS---------------SLSEGEVIEELE
        MK + I   L+L   I      +S SL V+ KH NF L  YE I V KSSR ++F  FN I  I+F    K S               S+      E ++
Subjt:  MKNLYIFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRS---------------SLSEGEVIEELE

Query:  -ESYSRSDDKVSSYEDRVYDSYDKD---------------------GEEELGGDNLEKKAQEFIDMMNSFWREELVYDR
           YS  D++   Y+   YD YD+D                     G E+  GD LE++ +EFI  MN  WREE+ +++
Subjt:  -ESYSRSDDKVSSYEDRVYDSYDKD---------------------GEEELGGDNLEKKAQEFIDMMNSFWREELVYDR

KAG6593708.1 hypothetical protein SDJN03_13184, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1053.57Show/hide
Query:  IFILFCQKVKRSSLSEGEVIEELE--ESYSRSDDKVSSYEDRVYDSYDKDGEEELGGDNLEKKAQEFIDMMNSFWREELVYDRF
        +FILF +K K+S   E  + E++E  E Y R DD++ ++   VYDS D+DG+E    D+ EKKAQEFI+MM SFWREELV DRF
Subjt:  IFILFCQKVKRSSLSEGEVIEELE--ESYSRSDDKVSSYEDRVYDSYDKDGEEELGGDNLEKKAQEFIDMMNSFWREELVYDRF

XP_017191961.1 uncharacterized protein LOC108174907 [Malus domestica]1.8e-0533.73Show/hide
Query:  IFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFN----TIIFILF--------CQKVKRSSLSEGEVIEEL---------
        +FV  LLC  I L  F   S  L   +H NFLL  YE I V KS+R ++F  FN    TI+F  F          +VK  +  E   +E+          
Subjt:  IFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFN----TIIFILF--------CQKVKRSSLSEGEVIEEL---------

Query:  -------EESYSRSDDKVSSYEDRVYDSYDKDGEEELGGDNLEKKAQEFIDMMNSFWREELVYDRF
                + Y   +D   SY+D + DS D  GEE+    +LE++ ++FI  + + WREEL YD F
Subjt:  -------EESYSRSDDKVSSYEDRVYDSYDKDGEEELGGDNLEKKAQEFIDMMNSFWREELVYDRF

TrEMBL top hitse value%identityAlignment
A0A0A0K9S4 Uncharacterized protein7.3e-1654.17Show/hide
Query:  LVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYS--RSDDKVSSYE-DRVYDSYDKD-GEEELGGDNLEKKA
        +V+F HRN +    EI+ V KSSRAS+FLA NTII ILF +K+K+ S  E E  E  ++  S    D +++SYE   V DS D+D  EE +  D+LEKKA
Subjt:  LVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYS--RSDDKVSSYE-DRVYDSYDKD-GEEELGGDNLEKKA

Query:  QEFIDMMNSFWREELVYDRF
        QEFIDMMN+FWREEL++DRF
Subjt:  QEFIDMMNSFWREELVYDRF

A0A540LE79 Uncharacterized protein1.5e-0534.76Show/hide
Query:  IFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFN----TIIFILF--------CQKVKRSSLSEGEVIEELEESYSRSDD
        +FV  LLC  I L  F   S  L   +H NFLL  YE I V KS+R ++F  FN    TI+F  F          +VK  +  E   +E+    YS   +
Subjt:  IFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFN----TIIFILF--------CQKVKRSSLSEGEVIEELEESYSRSDD

Query:  KVSSY-----------EDRVYDSYDKDGEEELG---GDNLEKKAQEFIDMMNSFWREELVYDRF
        + S Y           +D  YD  D D EE  G    ++LE++ ++FI  + + WREEL YD F
Subjt:  KVSSY-----------EDRVYDSYDKDGEEELG---GDNLEKKAQEFIDMMNSFWREELVYDRF

A0A5A7T9A6 Uncharacterized protein7.8e-1855.56Show/hide
Query:  LVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYSR-SDDKVSSYEDRVYDSYDKDGEEELGGDNLEKKAQEF
        +V+ KHRNF++ L EII V KSSRASMFLA NTI+ ILF +K+KR S  E E     ++  SR SD +++S E    +    +G EE   D+LEKKAQEF
Subjt:  LVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYSR-SDDKVSSYEDRVYDSYDKDGEEELGGDNLEKKAQEF

Query:  IDMMNSFWREELVYDRF
        IDMMN+FWREEL++DRF
Subjt:  IDMMNSFWREELVYDRF

A0A5N5HJG7 Uncharacterized protein7.5e-0534.36Show/hide
Query:  FVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFN----TIIFILF--------CQKVKRSSLSEGEVIEELEESYSRSDDK
        FV  LLC  I L  F   S  L   +H NFLL  YE I V KS+R ++F  FN    TI+F  F          +VK  +  E   +++    YS   ++
Subjt:  FVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFN----TIIFILF--------CQKVKRSSLSEGEVIEELEESYSRSDDK

Query:  VSSY-----------EDRVYDSYDKDGEEELGGD---NLEKKAQEFIDMMNSFWREELVYDRF
         S Y           +D  YD  D D EE  G +   +LE++ + FI  + + WREEL YD F
Subjt:  VSSY-----------EDRVYDSYDKDGEEELGGD---NLEKKAQEFIDMMNSFWREELVYDRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATCTTTACATATTTGTTCTTTTGCTCCTTTGCACCACTATTGCACTCAGTTTCTTCTTCTATTCCTCATCCCTTTTGGTGAATTTCAAGCATCGAAACTTCCT
CCTCCCGTTGTACGAAATCATTCGGGTAGGGAAATCGAGTCGTGCATCGATGTTTCTTGCATTTAACACCATTATTTTCATCCTCTTCTGCCAGAAGGTTAAGCGATCGT
CGCTAAGTGAAGGAGAAGTGATAGAAGAATTGGAAGAAAGTTACAGTAGAAGCGATGACAAAGTTAGTAGTTATGAAGATCGTGTTTATGATAGTTACGATAAAGATGGC
GAAGAAGAGCTTGGAGGTGATAATTTGGAGAAGAAGGCTCAAGAGTTCATTGACATGATGAACTCTTTTTGGAGAGAAGAATTGGTATATGATAGGTTTGAT
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATCTTTACATATTTGTTCTTTTGCTCCTTTGCACCACTATTGCACTCAGTTTCTTCTTCTATTCCTCATCCCTTTTGGTGAATTTCAAGCATCGAAACTTCCT
CCTCCCGTTGTACGAAATCATTCGGGTAGGGAAATCGAGTCGTGCATCGATGTTTCTTGCATTTAACACCATTATTTTCATCCTCTTCTGCCAGAAGGTTAAGCGATCGT
CGCTAAGTGAAGGAGAAGTGATAGAAGAATTGGAAGAAAGTTACAGTAGAAGCGATGACAAAGTTAGTAGTTATGAAGATCGTGTTTATGATAGTTACGATAAAGATGGC
GAAGAAGAGCTTGGAGGTGATAATTTGGAGAAGAAGGCTCAAGAGTTCATTGACATGATGAACTCTTTTTGGAGAGAAGAATTGGTATATGATAGGTTTGAT
Protein sequenceShow/hide protein sequence
MKNLYIFVLLLLCTTIALSFFFYSSSLLVNFKHRNFLLPLYEIIRVGKSSRASMFLAFNTIIFILFCQKVKRSSLSEGEVIEELEESYSRSDDKVSSYEDRVYDSYDKDG
EEELGGDNLEKKAQEFIDMMNSFWREELVYDRFD