; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007923 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007923
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold13:2456341..2456801
RNA-Seq ExpressionMS007923
SyntenyMS007923
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3000839.1 probable calcium-binding CML23 [Olea europaea subsp. europaea]4.1e-1650.93Show/hide
Query:  NKKLKASKEVDEIASEMDSDRDGFVNMEE-------DDDV----LMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQ
        N K  A+KE + +  EMDS+ DGFV+++E       D+D     +MEAF +FD  KNG I AE+L+R+   LG  K  L+DC  MI+G DKDGDGFVNF+
Subjt:  NKKLKASKEVDEIASEMDSDRDGFVNMEE-------DDDV----LMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQ

Query:  DFHLMMKA
        DF LMM A
Subjt:  DFHLMMKA

CAA3032646.1 probable calcium-binding CML23 [Olea europaea subsp. europaea]4.9e-1751.85Show/hide
Query:  NKKLKASKEVDEIASEMDSDRDGFVNMEE-------DDDV----LMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQ
        N K  A+KE +E+  EMDS+ DGFV+++E       D+D     +MEAF +FD  KNG I AE+L+R+   LG  K  L+DC  MI+G DKDGDGFVNF+
Subjt:  NKKLKASKEVDEIASEMDSDRDGFVNMEE-------DDDV----LMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQ

Query:  DFHLMMKA
        DF LMM A
Subjt:  DFHLMMKA

MBA0646276.1 hypothetical protein [Gossypium klotzschianum]7.0e-1647.01Show/hide
Query:  NKKLKASKEVDEIASEMDSDRDGFVNMEE--------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DK
        ++K  ASK  + +  EMD + DGF++++E                    DDD LM+AF +FD  KNG I AEELR +L  LG+ K  LK CKRMI G DK
Subjt:  NKKLKASKEVDEIASEMDSDRDGFVNMEE--------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DK

Query:  DGDGFVNFQDFHLMMKA
        DGDGFV+F++F LMM A
Subjt:  DGDGFVNFQDFHLMMKA

XP_004153117.1 calmodulin-beta [Cucumis sativus]3.1e-3253.3Show/hide
Query:  MFNSLKSSFTT-FHRKITSKPYFQKTLKFNNQKLPNSFTT------------SYGNLKISK--------RAPYNKKLKASKEVDEIASEMDSDRDGFVNM
        MFN   S F T FHR I+SKP+FQK+L  NNQKLP SFTT            S G+ KIS         R  Y KKLKA+ E +E+  EMDSDRDGF+ M
Subjt:  MFNSLKSSFTT-FHRKITSKPYFQKTLKFNNQKLPNSFTT------------SYGNLKISK--------RAPYNKKLKASKEVDEIASEMDSDRDGFVNM

Query:  ----------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLMMKATR
                  EE++++L EAF +FD  KNG ICAE+L+R LSK GW+K  LK CK+MIEG D DGDG+VNFQDF LMM   R
Subjt:  ----------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLMMKATR

XP_008460131.1 PREDICTED: calmodulin-like protein 7 [Cucumis melo]9.1e-3253.3Show/hide
Query:  MFNSLKSSFTT-FHRKITSKPYFQKTLKFNNQKLPNSFTT------------SYGNLKISK--------RAPYNKKLKASKEVDEIASEMDSDRDGFVNM
        M N   S F+T FHR ITSKP+FQK+L  NNQKLP SFTT            S G+ KIS         R  Y KKLKA+ E +E+  EMDSDRDGF+ M
Subjt:  MFNSLKSSFTT-FHRKITSKPYFQKTLKFNNQKLPNSFTT------------SYGNLKISK--------RAPYNKKLKASKEVDEIASEMDSDRDGFVNM

Query:  ----------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLMMKATR
                  EE++++L EAF +FD  KNG ICAEEL+R   K GW K  LK CK+MIEG D DGDGFVNFQDF LMM   R
Subjt:  ----------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLMMKATR

TrEMBL top hitse value%identityAlignment
A0A0A0K8Z4 Uncharacterized protein1.5e-3253.3Show/hide
Query:  MFNSLKSSFTT-FHRKITSKPYFQKTLKFNNQKLPNSFTT------------SYGNLKISK--------RAPYNKKLKASKEVDEIASEMDSDRDGFVNM
        MFN   S F T FHR I+SKP+FQK+L  NNQKLP SFTT            S G+ KIS         R  Y KKLKA+ E +E+  EMDSDRDGF+ M
Subjt:  MFNSLKSSFTT-FHRKITSKPYFQKTLKFNNQKLPNSFTT------------SYGNLKISK--------RAPYNKKLKASKEVDEIASEMDSDRDGFVNM

Query:  ----------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLMMKATR
                  EE++++L EAF +FD  KNG ICAE+L+R LSK GW+K  LK CK+MIEG D DGDG+VNFQDF LMM   R
Subjt:  ----------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLMMKATR

A0A1S3CBX8 calmodulin-like protein 74.4e-3253.3Show/hide
Query:  MFNSLKSSFTT-FHRKITSKPYFQKTLKFNNQKLPNSFTT------------SYGNLKISK--------RAPYNKKLKASKEVDEIASEMDSDRDGFVNM
        M N   S F+T FHR ITSKP+FQK+L  NNQKLP SFTT            S G+ KIS         R  Y KKLKA+ E +E+  EMDSDRDGF+ M
Subjt:  MFNSLKSSFTT-FHRKITSKPYFQKTLKFNNQKLPNSFTT------------SYGNLKISK--------RAPYNKKLKASKEVDEIASEMDSDRDGFVNM

Query:  ----------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLMMKATR
                  EE++++L EAF +FD  KNG ICAEEL+R   K GW K  LK CK+MIEG D DGDGFVNFQDF LMM   R
Subjt:  ----------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLMMKATR

A0A5J5US02 Uncharacterized protein4.4e-1647.01Show/hide
Query:  NKKLKASKEVDEIASEMDSDRDGFVNMEE--------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DK
        ++K  ASK  + I  EMD + DGF++++E                    DDD LM+AF +FD  KNG I A+ELR +L  LG+ K  LK CKRMI G DK
Subjt:  NKKLKASKEVDEIASEMDSDRDGFVNMEE--------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DK

Query:  DGDGFVNFQDFHLMMKA
        DGDGFV+F++F LMM A
Subjt:  DGDGFVNFQDFHLMMKA

A0A7J8U704 Uncharacterized protein3.4e-1647.01Show/hide
Query:  NKKLKASKEVDEIASEMDSDRDGFVNMEE--------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DK
        ++K  ASK  + +  EMD + DGF++++E                    DDD LM+AF +FD  KNG I AEELR +L  LG+ K  LK CKRMI G DK
Subjt:  NKKLKASKEVDEIASEMDSDRDGFVNMEE--------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DK

Query:  DGDGFVNFQDFHLMMKA
        DGDGFV+F++F LMM A
Subjt:  DGDGFVNFQDFHLMMKA

A0A7J9IX12 Uncharacterized protein3.4e-1647.01Show/hide
Query:  NKKLKASKEVDEIASEMDSDRDGFVNMEE--------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DK
        ++K  ASK  + +  EMD + DGF++++E                    DDD LM+AF +FD  KNG I AEELR +L  LG+ K  LK CKRMI G DK
Subjt:  NKKLKASKEVDEIASEMDSDRDGFVNMEE--------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DK

Query:  DGDGFVNFQDFHLMMKA
        DGDGFV+F++F LMM A
Subjt:  DGDGFVNFQDFHLMMKA

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML187.1e-1140.18Show/hide
Query:  EVDEIASEMDSDRDGFVNMEE-------------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGD
        EV  +  EMDSDRDGFV++ E                          +  L EAF ++D   NG+I A EL R+L +LG  K  + DC RMI   D DGD
Subjt:  EVDEIASEMDSDRDGFVNMEE-------------------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGD

Query:  GFVNFQDFHLMM
        G VNF +F  MM
Subjt:  GFVNFQDFHLMM

Q9FYK2 Probable calcium-binding protein CML252.7e-1038.61Show/hide
Query:  KEVDEIASEMDSDRDGFVNMEE----------DDDV---LMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLM
        +E+++  +E+D   DG++N EE           +DV   L +AFS++D   NG I AEEL  +L  LG  +  + +C++MI G DKDGDG ++F++F +M
Subjt:  KEVDEIASEMDSDRDGFVNMEE----------DDDV---LMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLM

Query:  M
        M
Subjt:  M

Q9M7R0 Calcium-binding allergen Ole e 87.1e-1136.79Show/hide
Query:  ASKEVDEIASEMDSDRDGFVNMEE----------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQ
        + +E+  I  E+D+D+DGF+N++E                 ++ L EAF L+D   NG I + EL +IL++LG  ++   DC  MI+  D DGDG+V+F+
Subjt:  ASKEVDEIASEMDSDRDGFVNMEE----------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQ

Query:  DFHLMM
        +F  MM
Subjt:  DFHLMM

Q9SRR7 Calmodulin-like protein 32.1e-1038.83Show/hide
Query:  KEVDEIASEMDSDRDGFVNMEE-------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRK-FGLKDCKRMI-EGDKDGDGFVNFQDFHL
        K++ ++  ++D + DG+V++EE             +++ + EAF++FD  ++G I  EELR +L+ LG ++   L+DCKRMI + D DGDG VNF++F  
Subjt:  KEVDEIASEMDSDRDGFVNMEE-------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRK-FGLKDCKRMI-EGDKDGDGFVNFQDFHL

Query:  MMK
        MMK
Subjt:  MMK

Q9SS31 Probable calcium-binding protein CML363.2e-1139.42Show/hide
Query:  KEVDEIASEMDSDRDGFVNMEE------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMI-EGDKDGDGFVNFQDFHLMM
        +E++ +  E+D D DG + +EE            D   L E F  FD  ++G I A+EL R+ S +G  +  L DCKRMI + D+DGDGFV F +F  MM
Subjt:  KEVDEIASEMDSDRDGFVNMEE------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMI-EGDKDGDGFVNFQDFHLMM

Query:  KATR
           R
Subjt:  KATR

Arabidopsis top hitse value%identityAlignment
AT1G05990.1 EF hand calcium-binding protein family3.0e-0935.58Show/hide
Query:  KEVDEIASEMDSDRDGFVNM--------------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRK-FGLKDCKRMIEG-DKDGDGFVNFQDFH
        KE+ ++  ++D + DG V++              +E+++ + EAF++FD   +G I  +EL+ +LS LG ++   L DCK+MI+  D DGDG VN+++F 
Subjt:  KEVDEIASEMDSDRDGFVNM--------------EEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRK-FGLKDCKRMIEG-DKDGDGFVNFQDFH

Query:  LMMK
         MMK
Subjt:  LMMK

AT1G24620.1 EF hand calcium-binding protein family1.9e-1138.61Show/hide
Query:  KEVDEIASEMDSDRDGFVNMEE----------DDDV---LMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLM
        +E+++  +E+D   DG++N EE           +DV   L +AFS++D   NG I AEEL  +L  LG  +  + +C++MI G DKDGDG ++F++F +M
Subjt:  KEVDEIASEMDSDRDGFVNMEE----------DDDV---LMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQDFHLM

Query:  M
        M
Subjt:  M

AT2G36180.1 EF hand calcium-binding protein family4.7e-1033.94Show/hide
Query:  SKEVDEIASEMDSDRDGFVN----------------MEEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQD
        S+E+D++   +D D DG ++                  E++ V+ EAF L+D   +G+I A E+  +L +LG  K  ++DC  M++  DKD DGFVNF++
Subjt:  SKEVDEIASEMDSDRDGFVN----------------MEEDDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMIEG-DKDGDGFVNFQD

Query:  FHLMMKATR
        F +MM + +
Subjt:  FHLMMKATR

AT3G07490.1 ARF-GAP domain 111.5e-1138.83Show/hide
Query:  KEVDEIASEMDSDRDGFVNMEE-------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRK-FGLKDCKRMI-EGDKDGDGFVNFQDFHL
        K++ ++  ++D + DG+V++EE             +++ + EAF++FD  ++G I  EELR +L+ LG ++   L+DCKRMI + D DGDG VNF++F  
Subjt:  KEVDEIASEMDSDRDGFVNMEE-------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRK-FGLKDCKRMI-EGDKDGDGFVNFQDFHL

Query:  MMK
        MMK
Subjt:  MMK

AT3G10190.1 Calcium-binding EF-hand family protein2.3e-1239.42Show/hide
Query:  KEVDEIASEMDSDRDGFVNMEE------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMI-EGDKDGDGFVNFQDFHLMM
        +E++ +  E+D D DG + +EE            D   L E F  FD  ++G I A+EL R+ S +G  +  L DCKRMI + D+DGDGFV F +F  MM
Subjt:  KEVDEIASEMDSDRDGFVNMEE------------DDDVLMEAFSLFDCYKNGQICAEELRRILSKLGWRKFGLKDCKRMI-EGDKDGDGFVNFQDFHLMM

Query:  KATR
           R
Subjt:  KATR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATTCTCTAAAATCTTCCTTCACAACATTCCATAGAAAAATCACCTCCAAACCCTACTTCCAAAAAACCCTAAAGTTCAACAACCAAAAGCTCCCTAATTCTTT
CACCACTTCCTATGGCAACCTCAAGATCTCAAAGAGAGCTCCATACAATAAGAAGCTTAAAGCTTCAAAAGAAGTAGACGAAATCGCAAGCGAAATGGACTCGGACCGCG
ATGGGTTCGTGAACATGGAAGAAGATGATGATGTTCTTATGGAAGCCTTTTCTCTATTTGATTGTTACAAAAATGGGCAGATTTGTGCTGAAGAATTGAGGAGGATTTTG
AGCAAACTTGGGTGGAGAAAATTTGGGTTGAAAGATTGCAAAAGAATGATTGAAGGAGACAAAGATGGAGATGGATTTGTGAATTTTCAAGATTTTCATCTGATGATGAA
AGCAACAAGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATTCTCTAAAATCTTCCTTCACAACATTCCATAGAAAAATCACCTCCAAACCCTACTTCCAAAAAACCCTAAAGTTCAACAACCAAAAGCTCCCTAATTCTTT
CACCACTTCCTATGGCAACCTCAAGATCTCAAAGAGAGCTCCATACAATAAGAAGCTTAAAGCTTCAAAAGAAGTAGACGAAATCGCAAGCGAAATGGACTCGGACCGCG
ATGGGTTCGTGAACATGGAAGAAGATGATGATGTTCTTATGGAAGCCTTTTCTCTATTTGATTGTTACAAAAATGGGCAGATTTGTGCTGAAGAATTGAGGAGGATTTTG
AGCAAACTTGGGTGGAGAAAATTTGGGTTGAAAGATTGCAAAAGAATGATTGAAGGAGACAAAGATGGAGATGGATTTGTGAATTTTCAAGATTTTCATCTGATGATGAA
AGCAACAAGA
Protein sequenceShow/hide protein sequence
MFNSLKSSFTTFHRKITSKPYFQKTLKFNNQKLPNSFTTSYGNLKISKRAPYNKKLKASKEVDEIASEMDSDRDGFVNMEEDDDVLMEAFSLFDCYKNGQICAEELRRIL
SKLGWRKFGLKDCKRMIEGDKDGDGFVNFQDFHLMMKATR