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MS007927 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007927
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear protein X1
Genome locationscaffold13:2485887..2486219
RNA-Seq ExpressionMS007927
SyntenyMS007927
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER33580.1 nuclear protein X1 [Striga asiatica]7.5e-0743.52Show/hide
Query:  ERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGER-MFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKG
        E GG   ++GDLVEL    VV +DV+ E+V D GE  +  +  G   V D  DGDG  AVDL  E G  +VV E   +  + E+ GD+VG D G GG  G
Subjt:  ERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGER-MFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKG

Query:  ENEEEEFG
        E+E++  G
Subjt:  ENEEEEFG

KAF1897991.1 hypothetical protein Lal_00032753 [Lupinus albus]8.9e-0859.38Show/hide
Query:  NGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKGENEEE
        +GGES V +D+DGDGL AVD+VGE GL +V   +AV+R   +NVGD+VGGD GD  G  E EEE
Subjt:  NGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKGENEEE

KAF8702535.1 hypothetical protein HU200_032917 [Digitaria exilis]3.1e-0847.25Show/hide
Query:  VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGG
        VERGGE  +  + V+L  + VV++  +AE VLD GE    D  G  AVG+DEDGD + AVDLV   GL +V     VLR  +E+  D+VGG
Subjt:  VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGG

KCW72927.1 hypothetical protein EUGRSUZ_E01366 [Eucalyptus grandis]4.3e-1856.48Show/hide
Query:  VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKG
        V+ GGE  ++GDLVEL  + VV+DDV  E VLDDGE +    GG  AV + EDGDGL AVDLVG+ GL +V AE  VL E LE+ GD+V    GDGGG  
Subjt:  VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKG

Query:  ENEEEEFG
        + EEEE G
Subjt:  ENEEEEFG

THU43778.1 hypothetical protein C4D60_Mb02t00360 [Musa balbisiana]6.4e-0647.19Show/hide
Query:  GGECSSIGDLVELRRIVVVQDDVKAEEVLD--DGE-RMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIV
        GGE  + G+LVEL    VV +DV+ EEVL+  +GE R+  + G    V D EDGDG TAVDL  E G  +VV E   LR + +N  D+V
Subjt:  GGECSSIGDLVELRRIVVVQDDVKAEEVLD--DGE-RMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIV

TrEMBL top hitse value%identityAlignment
A0A059C3M7 Uncharacterized protein2.1e-1856.48Show/hide
Query:  VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKG
        V+ GGE  ++GDLVEL  + VV+DDV  E VLDDGE +    GG  AV + EDGDGL AVDLVG+ GL +V AE  VL E LE+ GD+V    GDGGG  
Subjt:  VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKG

Query:  ENEEEEFG
        + EEEE G
Subjt:  ENEEEEFG

A0A0A0KZJ2 Uncharacterized protein8.7e-0952.17Show/hide
Query:  VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLL
        +E  GE   +GDLVE   IVVVQDDV+ EE+  +GERMF  +G ES +G+++D D LTAV LVG+  ++
Subjt:  VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLL

A0A4S8I773 Uncharacterized protein3.1e-0647.19Show/hide
Query:  GGECSSIGDLVELRRIVVVQDDVKAEEVLD--DGE-RMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIV
        GGE  + G+LVEL    VV +DV+ EEVL+  +GE R+  + G    V D EDGDG TAVDL  E G  +VV E   LR + +N  D+V
Subjt:  GGECSSIGDLVELRRIVVVQDDVKAEEVLD--DGE-RMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIV

A0A5A7PLF7 Nuclear protein X13.6e-0743.52Show/hide
Query:  ERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGER-MFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKG
        E GG   ++GDLVEL    VV +DV+ E+V D GE  +  +  G   V D  DGDG  AVDL  E G  +VV E   +  + E+ GD+VG D G GG  G
Subjt:  ERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGER-MFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKG

Query:  ENEEEEFG
        E+E++  G
Subjt:  ENEEEEFG

A0A6A5PNL6 Uncharacterized protein4.3e-0859.38Show/hide
Query:  NGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKGENEEE
        +GGES V +D+DGDGL AVD+VGE GL +V   +AV+R   +NVGD+VGGD GD  G  E EEE
Subjt:  NGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKGENEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAGAGCGTGGTGGAGAGTGTAGTTCCATTGGAGATCTTGTGGAGCTTCGTCGGATCGTAGTAGTCCAAGACGATGTGAAGGCTGAGGAAGTTCTTGATGACGGAGAGAG
GATGTTTCGCGACAACGGGGGAGAGAGCGCCGTTGGAGACGACGAGGACGGTGATGGTCTGACGGCTGTTGATCTCGTCGGCGAGCCTGGTCTGCTGCAAGTAGTTGCAG
AAATCGCTGTACTCCGGGAAGTCCTTGAGAATGTCGGTGATATTGTGGGCGGAGACGACGGCGACGGCGGCGGCAAGGGCGAGAACGAAGAAGAGGAATTTGGAATCCGC
CAT
mRNA sequenceShow/hide mRNA sequence
GTAGAGCGTGGTGGAGAGTGTAGTTCCATTGGAGATCTTGTGGAGCTTCGTCGGATCGTAGTAGTCCAAGACGATGTGAAGGCTGAGGAAGTTCTTGATGACGGAGAGAG
GATGTTTCGCGACAACGGGGGAGAGAGCGCCGTTGGAGACGACGAGGACGGTGATGGTCTGACGGCTGTTGATCTCGTCGGCGAGCCTGGTCTGCTGCAAGTAGTTGCAG
AAATCGCTGTACTCCGGGAAGTCCTTGAGAATGTCGGTGATATTGTGGGCGGAGACGACGGCGACGGCGGCGGCAAGGGCGAGAACGAAGAAGAGGAATTTGGAATCCGC
CAT
Protein sequenceShow/hide protein sequence
VERGGECSSIGDLVELRRIVVVQDDVKAEEVLDDGERMFRDNGGESAVGDDEDGDGLTAVDLVGEPGLLQVVAEIAVLREVLENVGDIVGGDDGDGGGKGENEEEEFGIR
H