; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007940 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007940
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome locationscaffold13:2566948..2567093
RNA-Seq ExpressionMS007940
SyntenyMS007940
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051287 - NAD binding (molecular function)
InterPro domainsIPR001135 - NADH-quinone oxidoreductase, subunit D
IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H
IPR029014 - [NiFe]-hydrogenase, large subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFU94944.1 NdhH, partial [Putranjiva roxburghii]3.6e-1481.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
QJR53013.1 NADH-plastoquinone oxidoreductase subunit 7 [Herpetospermum pedunculosum]2.7e-1481.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
YP_009300158.1 NADH-plastoquinone oxidoreductase subunit 7 [Pelargonium transvaalense]1.6e-1479.59Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++REL+YDLFEAAT MRMM N+F IG VAADLPHGWIDKCLDFCHY +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
YP_009751793.1 NADH dehydrogenase subunit H [Herpetospermum pedunculosum]2.7e-1481.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
YP_009975439.1 NADH-plastoquinone oxidoreductase subunit 7 [Drypetes lateriflora]3.6e-1481.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
TrEMBL top hitse value%identityAlignment
A0A1B0PUM8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic7.8e-1579.59Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++REL+YDLFEAAT MRMM N+F IG VAADLPHGWIDKCLDFCHY +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
A0A6H0ET26 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.3e-1481.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
A0A6M4K3L3 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.3e-1481.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
A0A7G8QCP6 NADH-quinone oxidoreductase subunit D1.7e-1481.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
A0A7G8QDC2 NADH-quinone oxidoreductase subunit D1.7e-1481.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
SwissProt top hitse value%identityAlignment
A0A391 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1679.59Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++REL+YDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
A7Y3K5 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic6.1e-1779.59Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++REL+YDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC+Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
A8SEG2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic1.0e-1679.59Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++REL+YDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic8.0e-1781.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic8.0e-1781.63Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RELVYDLFEAAT MRMM NFF IG VAADLPHGWIDKCLDFC Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
Arabidopsis top hitse value%identityAlignment
ATCG01110.1 NAD(P)H dehydrogenase subunit H1.1e-1675.51Show/hide
Query:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI
        F++RE VYDLFEAAT MRMM NFF IG +AADLP+GWIDKCLDFC Y +
Subjt:  FQKRELVYDLFEAATDMRMM-NFFCIGRVAADLPHGWIDKCLDFCHYLI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTCAAAAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGATATGAGAATGATGAATTTTTTTTGTATCGGGAGAGTCGCGGCTGATCTACCTCATGGCTGGAT
AGATAAATGTTTGGATTTCTGCCATTATCTCATA
mRNA sequenceShow/hide mRNA sequence
TTTCAAAAAAGAGAATTAGTATATGATCTATTCGAAGCAGCCACCGATATGAGAATGATGAATTTTTTTTGTATCGGGAGAGTCGCGGCTGATCTACCTCATGGCTGGAT
AGATAAATGTTTGGATTTCTGCCATTATCTCATA
Protein sequenceShow/hide protein sequence
FQKRELVYDLFEAATDMRMMNFFCIGRVAADLPHGWIDKCLDFCHYLI