; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007947 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007947
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTCP family transcription factor
Genome locationscaffold13:2659331..2660305
RNA-Seq ExpressionMS007947
SyntenyMS007947
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008361 - regulation of cell size (biological process)
GO:0048364 - root development (biological process)
GO:1900056 - negative regulation of leaf senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026035.1 Transcription factor TCP9, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-11275.22Show/hide
Query:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MAD QKQE ++  D   P        +DSS MDLLALAPKQE PD         S IQ+VNF  EIAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT  SSNQ+    +ADQS+ KKRRKRPANSDYVDVNDAV+V+VSN
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN

Query:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS
        GVV +     AA Q A PPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSFP    P  P VNT ARPIS+V  SK + SHI SS TNQSS++SS+
Subjt:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS

Query:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        S SKS+SVMAPIS+STVPTSS   KTTT+MLRDFSLEIYDK+E
Subjt:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

XP_022964565.1 transcription factor TCP9 [Cucurbita moschata]5.1e-11275.22Show/hide
Query:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MAD QKQE ++  D   P        +DSS MDLLALAPKQE PD         S IQ+VNF  EIAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT  SSNQ+    +ADQS+ KKRRKRPANSDYVDVNDAV+V+VSN
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN

Query:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS
        GVV +     AA Q A PPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSFP    P  P VNT ARPIS+V  SK + SHI SS TNQSS++SS+
Subjt:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS

Query:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        S SKS+SVMAPIS+STVPTSS   KTTT+MLRDFSLEIYDK+E
Subjt:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

XP_022999831.1 transcription factor TCP9 [Cucurbita maxima]3.0e-11275.22Show/hide
Query:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MAD QKQE ++  D   P        +DSS MDLLALAPKQE PD         S IQ+VNF  EIAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT  SSNQ+    +ADQS+ KKRRKRPANSDYVDVNDAV+V+VSN
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN

Query:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS
        GVV +     AA Q A PPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSFP    P PP VNT ARPIS+V  SK + SHI SS TNQSS++SS+
Subjt:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS

Query:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
          SKS+SVMAPIS+STVPTSS   KTTT+MLRDFSLEIYDK+E
Subjt:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

XP_023515272.1 transcription factor TCP9 [Cucurbita pepo subsp. pepo]1.1e-11175.22Show/hide
Query:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MAD QKQE ++  D   P        +DSS MDLLALAPKQE PD         S IQ+VNF  EIAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT  SSNQ+    +ADQS  KKRRKRPANSDYVDVNDAV+V+VSN
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN

Query:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS
        GVV +     AA Q A PPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSFP    P  P VNT ARPIS+V  SK + SHI SS TNQSS++SS+
Subjt:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS

Query:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        S SKS+SVMAPIS+STVPTSS   KTTT+MLRDFSLEIYDK+E
Subjt:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

XP_038876433.1 transcription factor TCP9 [Benincasa hispida]2.3e-11274.64Show/hide
Query:  MADFQKQELHEHHDSPPPPPP---ADSSPMDLLALAPKQELPDS-------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR
        MAD QKQEL +  DSP    P   +DSS +DLL L PKQE PDS       SG+QL+NFT +IAKTVS+LPPKRASTKDRHTKVEGRGRRIRIPATCAAR
Subjt:  MADFQKQELHEHHDSPPPPPP---ADSSPMDLLALAPKQELPDS-------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAAR

Query:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAV--SNG
        IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSS        +AD S+AKKRRKRPANSDYVDV+ A++V+V  SNG
Subjt:  IFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAV--SNG

Query:  VVQAA------AQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS
        V+QA       A Q AFPPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSFP P     P ++T ARPIS+  SSKP+ SHI SSPTNQSS+TSSS
Subjt:  VVQAA------AQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS

Query:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        S SKSQSVMAPIS+ST  T+    KTTTQMLRDFSLEIY+KEE
Subjt:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

TrEMBL top hitse value%identityAlignment
A0A0A0KCU1 TCP domain-containing protein8.8e-11075.76Show/hide
Query:  MADFQKQELHEHHDSPPPP---PPADSSPMDLLALAPKQELPDSS-GIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTR
        MAD QKQEL +  DSPP       +DSS MDLL L PKQE PDS+    L+ F  +I KT+SSLPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTR
Subjt:  MADFQKQELHEHHDSPPPP---PPADSSPMDLLALAPKQELPDSS-GIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTR

Query:  ELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVS-NGVVQAAAQ
        ELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSSNQ+    +AD S+ KKRRKRPANSDYVDVNDA++V++S + V  ++A 
Subjt:  ELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVS-NGVVQAAAQ

Query:  QPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPIS
        Q AFPPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSF TP     P +NT ARPIS+ P SK E SHI SSPTNQSS+TSSSS SKSQSVMAPI 
Subjt:  QPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPIS

Query:  TSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
              SSSS KTTTQMLRDFSLEIYDKEE
Subjt:  TSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

A0A5A7TAM9 Transcription factor TCP91.5e-10975.45Show/hide
Query:  MADFQKQELHEHHDSPPPP---PPADSSPMDLLALAPKQELPDSS-GIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTR
        MAD QKQEL +  DSPP       +DSS MDLL L PKQE PDS+    L+ F  +I KT+SSLPPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTR
Subjt:  MADFQKQELHEHHDSPPPP---PPADSSPMDLLALAPKQELPDSS-GIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTR

Query:  ELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVS-NGVVQAAAQ
        ELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT SSSNQ+    +AD S+ KKRRKRPANSDYVDVNDA++V++S + V  + A 
Subjt:  ELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVS-NGVVQAAAQ

Query:  QPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPIS
        Q AFPPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSF   + P  P +NT ARPIS+ P SKP+ SHI SSPTNQSS+TSSSS SKSQSVMAPIS
Subjt:  QPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPIS

Query:  TSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        +S+V  S    KTTTQMLRDFSLEIYDKEE
Subjt:  TSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

A0A6J1H4Z3 transcription factor TCP9-like8.8e-11072.89Show/hide
Query:  MADFQKQELHEHHDSPPPP---PPADSSPMDLLALAPKQELPDSS-GIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTR
        MAD  KQ+L +HH SPP       +DSSPM+LL LAPK+E PD+    Q+V FTAEI KTVSS+PPKR STKDRHTKVEGRGRRIRIPATCAARIFQLTR
Subjt:  MADFQKQELHEHHDSPPPP---PPADSSPMDLLALAPKQELPDSS-GIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTR

Query:  ELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAV--------SNG
        ELGHKSDGETIRWLLERAEPAIIAATGTGT+PAIAMSVNGTLKIPTTT SSSNQ+    + DQS++KKRRKRPANSDYVDVNDAV+V+V        SNG
Subjt:  ELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAV--------SNG

Query:  VVQAA------AQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS
         VQAA      A Q  FPPG VPVWAIPSNAIIPGAVFMVPSV CSS+RPQ FSFPTP     P +NT ARPIS+VP SK   SHI ++ TNQSS+TS+S
Subjt:  VVQAA------AQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS

Query:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        S SKS+SVMAPIS+STV T+    KTT QMLR+FSLEIYDKEE
Subjt:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

A0A6J1HL63 transcription factor TCP92.5e-11275.22Show/hide
Query:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MAD QKQE ++  D   P        +DSS MDLLALAPKQE PD         S IQ+VNF  EIAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT  SSNQ+    +ADQS+ KKRRKRPANSDYVDVNDAV+V+VSN
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN

Query:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS
        GVV +     AA Q A PPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSFP    P  P VNT ARPIS+V  SK + SHI SS TNQSS++SS+
Subjt:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS

Query:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        S SKS+SVMAPIS+STVPTSS   KTTT+MLRDFSLEIYDK+E
Subjt:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

A0A6J1KE73 transcription factor TCP91.4e-11275.22Show/hide
Query:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC
        MAD QKQE ++  D   P        +DSS MDLLALAPKQE PD         S IQ+VNF  EIAKTVS LPPKRASTKDRHTKVEGRGRRIRIPATC
Subjt:  MADFQKQELHEHHDSPPPPP-----PADSSPMDLLALAPKQELPDS--------SGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATC

Query:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN
        AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTT  SSNQ+    +ADQS+ KKRRKRPANSDYVDVNDAV+V+VSN
Subjt:  AARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSN

Query:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS
        GVV +     AA Q A PPG VPVWAIPSNAIIPGAVFMVPSVACSS+RPQLFSFP    P PP VNT ARPIS+V  SK + SHI SS TNQSS++SS+
Subjt:  GVVQA-----AAQQPAFPPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSS

Query:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
          SKS+SVMAPIS+STVPTSS   KTTT+MLRDFSLEIYDK+E
Subjt:  SVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

SwissProt top hitse value%identityAlignment
A2YXQ1 Transcription factor PCF25.2e-3551Show/hide
Query:  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAA-ADQ
        PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIAATGTGT+PAIA +V+G L+IPT +SSSS     A    ++
Subjt:  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAA-ADQ

Query:  SSAKKRRK--------------RPANSDYVDV--------NDAVAVAVSNGVVQAAAQQPAFPPGLVPVWAIPS---------NAIIP--GAVFMVPSVA
        SSAK+RRK                A + Y  V        +   A++V +G+    A     P GLVPV+A+P+         N +IP   AV+MVP  A
Subjt:  SSAKKRRK--------------RPANSDYVDV--------NDAVAVAVSNGVVQAAAQQPAFPPGLVPVWAIPS---------NAIIP--GAVFMVPSVA

O64647 Transcription factor TCP95.9e-6354.05Show/hide
Query:  NFTAEIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSS
        +F+  +A   S+ PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT++
Subjt:  NFTAEIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSS

Query:  SSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVA-------------VAVSNGVVQAAAQQPAFPPGLVPVWAIPSNAIIP--GAVFMVPSVACSSSR
         S+         ++  KK+RKRP+NS+Y+D++DAV+             +     +  +   Q   P G+ P+WAIPSNA+IP  GA F++P +A  S++
Subjt:  SSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVA-------------VAVSNGVVQAAAQQPAFPPGLVPVWAIPSNAIIP--GAVFMVPSVACSSSR

Query:  PQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSST--KTTTQMLRDFSLEIYDKEE
        PQL +FP     P   V  AA   +S  +  P    + SS     S  S S++S++ SVMAP S+S V T SSS+   TTT  LRDFSLEIY+K+E
Subjt:  PQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSST--KTTTQMLRDFSLEIYDKEE

Q6ZBH6 Transcription factor PCF25.2e-3551Show/hide
Query:  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAA-ADQ
        PP R   +DRHTKVEGRGRRIR+PA CAARIFQLTRELGHKSDGETIRWLL+++EPAIIAATGTGT+PAIA +V+G L+IPT +SSSS     A    ++
Subjt:  PPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAA-ADQ

Query:  SSAKKRRK--------------RPANSDYVDV--------NDAVAVAVSNGVVQAAAQQPAFPPGLVPVWAIPS---------NAIIP--GAVFMVPSVA
        SSAK+RRK                A + Y  V        +   A++V +G+    A     P GLVPV+A+P+         N +IP   AV+MVP  A
Subjt:  SSAKKRRK--------------RPANSDYVDV--------NDAVAVAVSNGVVQAAAQQPAFPPGLVPVWAIPS---------NAIIP--GAVFMVPSVA

Q9C9L2 Transcription factor TCP154.3e-2941.9Show/hide
Query:  PPPPADSSPMDLLALAPKQELPDSSGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA
        P P  +  P   L L        S+ + +++ T+E        PPKR STKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA
Subjt:  PPPPADSSPMDLLALAPKQELPDSSGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA

Query:  IIAATGTGTIPAIAMSVNGTLKIP---------TTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAV----AVSNGVVQAAAQQ--PAFPPG
        +IAATGTGTIPA   S+N +L+            TT SS     P  +       + + RP N  +   + +  +     + N +VQ+ A     +  P 
Subjt:  IIAATGTGTIPAIAMSVNGTLKIP---------TTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAV----AVSNGVVQAAAQQ--PAFPPG

Query:  LVPVWAIPSN
          P W+   N
Subjt:  LVPVWAIPSN

Q9LT89 Transcription factor TCP191.3e-4147.04Show/hide
Query:  PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSS
        PKR ++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT   SS          D   
Subjt:  PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSS

Query:  AKKRRKRPANSDYVDVNDAVAVAVSNGVVQAAAQQPAF------PPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPI
         KKRRKR   SD+VDVND+   +V++G+    A             G VP W +       G  F+           Q+++ PT      P +N  ARP+
Subjt:  AKKRRKRPANSDYVDVNDAVAVAVSNGVVQAAAQQPAF------PPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPI

Query:  SSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        SS                          VS +    A + T        S   TTQ LRDFSLEIYDK E
Subjt:  SSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

Arabidopsis top hitse value%identityAlignment
AT1G69690.1 TCP family transcription factor3.0e-3041.9Show/hide
Query:  PPPPADSSPMDLLALAPKQELPDSSGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA
        P P  +  P   L L        S+ + +++ T+E        PPKR STKDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEPA
Subjt:  PPPPADSSPMDLLALAPKQELPDSSGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPA

Query:  IIAATGTGTIPAIAMSVNGTLKIP---------TTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAV----AVSNGVVQAAAQQ--PAFPPG
        +IAATGTGTIPA   S+N +L+            TT SS     P  +       + + RP N  +   + +  +     + N +VQ+ A     +  P 
Subjt:  IIAATGTGTIPAIAMSVNGTLKIP---------TTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAV----AVSNGVVQAAAQQ--PAFPPG

Query:  LVPVWAIPSN
          P W+   N
Subjt:  LVPVWAIPSN

AT2G45680.1 TCP family transcription factor4.2e-6454.05Show/hide
Query:  NFTAEIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSS
        +F+  +A   S+ PP KRASTKDRHTKVEGRGRRIR+PATCAARIFQLTRELGHKSDGETIRWLLE AEPAIIAATGTGT+PAIAMSVNGTLKIPTTT++
Subjt:  NFTAEIAKTVSSLPP-KRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSS

Query:  SSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVA-------------VAVSNGVVQAAAQQPAFPPGLVPVWAIPSNAIIP--GAVFMVPSVACSSSR
         S+         ++  KK+RKRP+NS+Y+D++DAV+             +     +  +   Q   P G+ P+WAIPSNA+IP  GA F++P +A  S++
Subjt:  SSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVA-------------VAVSNGVVQAAAQQPAFPPGLVPVWAIPSNAIIP--GAVFMVPSVACSSSR

Query:  PQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSST--KTTTQMLRDFSLEIYDKEE
        PQL +FP     P   V  AA   +S  +  P    + SS     S  S S++S++ SVMAP S+S V T SSS+   TTT  LRDFSLEIY+K+E
Subjt:  PQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSST--KTTTQMLRDFSLEIYDKEE

AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 141.5e-2945.6Show/hide
Query:  DFQKQELHEHH--------------DSPPPPPPADSSPMDLLALAPKQEL-------------PDSSGIQLVNFTAEIAKTVSSLPP-KRASTKDRHTKV
        D   + LH HH              D      P+ SS   L +L   Q+L             P ++  +L+    E A   +  PP KRASTKDRHTKV
Subjt:  DFQKQELHEHH--------------DSPPPPPPADSSPMDLLALAPKQEL-------------PDSSGIQLVNFTAEIAKTVSSLPP-KRASTKDRHTKV

Query:  EGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAA
        +GRGRRIR+PA CAAR+FQLTRELGHKSDGETI WLL++AEP++IAATGTGTIPA   S+N +L+   ++ S  +  + AA+
Subjt:  EGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAA

AT5G51910.1 TCP family transcription factor9.1e-4347.04Show/hide
Query:  PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSS
        PKR ++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT   SS          D   
Subjt:  PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSS

Query:  AKKRRKRPANSDYVDVNDAVAVAVSNGVVQAAAQQPAF------PPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPI
         KKRRKR   SD+VDVND+   +V++G+    A             G VP W +       G  F+           Q+++ PT      P +N  ARP+
Subjt:  AKKRRKRPANSDYVDVNDAVAVAVSNGVVQAAAQQPAF------PPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPI

Query:  SSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        SS                          VS +    A + T        S   TTQ LRDFSLEIYDK E
Subjt:  SSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE

AT5G51910.2 TCP family transcription factor9.1e-4347.04Show/hide
Query:  PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSS
        PKR ++KDRHTKVEGRGRRIR+PA CAAR+FQLTRELGHKSDGETIRWLLERAEPAII ATGTGT+PAIA+SVNGTLKIPT   SS          D   
Subjt:  PKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSS

Query:  AKKRRKRPANSDYVDVNDAVAVAVSNGVVQAAAQQPAF------PPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPI
         KKRRKR   SD+VDVND+   +V++G+    A             G VP W +       G  F+           Q+++ PT      P +N  ARP+
Subjt:  AKKRRKRPANSDYVDVNDAVAVAVSNGVVQAAAQQPAF------PPGLVPVWAIPSNAIIPGAVFMVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPI

Query:  SSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE
        SS                          VS +    A + T        S   TTQ LRDFSLEIYDK E
Subjt:  SSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTTCCAAAAGCAGGAACTCCACGAACACCACGATTCGCCGCCGCCGCCGCCGCCGGCCGATTCCTCCCCCATGGACCTTCTTGCCCTCGCTCCCAAGCAGGA
GCTCCCGGACTCGTCTGGAATTCAGCTCGTCAATTTCACCGCGGAGATCGCTAAAACGGTGTCGTCTCTCCCCCCGAAGCGGGCCTCCACCAAGGATCGCCACACCAAGG
TCGAGGGCCGCGGCCGGAGGATCCGAATTCCGGCCACCTGCGCCGCCCGTATCTTCCAGCTCACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGCTGGCTT
CTCGAGCGGGCCGAGCCGGCGATTATCGCCGCCACGGGCACCGGTACCATTCCCGCCATCGCCATGTCCGTTAATGGCACCCTCAAAATCCCCACCACTACTTCTTCTTC
CTCCAACCAAGAACAACCCGCCGCCGCCGCCGACCAATCCTCCGCTAAGAAGCGCCGTAAACGCCCCGCTAACAGCGACTACGTTGACGTAAACGACGCCGTCGCCGTCG
CCGTCTCCAACGGTGTCGTTCAGGCCGCCGCTCAACAGCCGGCTTTTCCTCCTGGTTTGGTTCCAGTGTGGGCCATCCCATCCAACGCCATAATCCCCGGCGCGGTTTTC
ATGGTTCCATCCGTCGCCTGCTCCTCCTCCCGCCCGCAGTTATTCTCATTCCCGACTCCAACGCCGCCGCCGCCGCCGCCCGTCAACACCGCGGCGAGGCCCATTTCTTC
CGTTCCGTCGAGCAAGCCCGAGCCGTCTCACATTCACTCCAGCCCCACCAATCAAAGCTCCACCACTTCAAGCTCTTCCGTCTCGAAGTCTCAATCCGTCATGGCGCCGA
TCTCGACCTCCACCGTCCCGACGAGCAGCAGTTCCACAAAAACGACGACGCAGATGCTGAGAGACTTCTCGTTAGAGATTTACGATAAAGAAGAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTTCCAAAAGCAGGAACTCCACGAACACCACGATTCGCCGCCGCCGCCGCCGCCGGCCGATTCCTCCCCCATGGACCTTCTTGCCCTCGCTCCCAAGCAGGA
GCTCCCGGACTCGTCTGGAATTCAGCTCGTCAATTTCACCGCGGAGATCGCTAAAACGGTGTCGTCTCTCCCCCCGAAGCGGGCCTCCACCAAGGATCGCCACACCAAGG
TCGAGGGCCGCGGCCGGAGGATCCGAATTCCGGCCACCTGCGCCGCCCGTATCTTCCAGCTCACTCGAGAGCTCGGCCACAAGTCCGACGGCGAAACCATCCGCTGGCTT
CTCGAGCGGGCCGAGCCGGCGATTATCGCCGCCACGGGCACCGGTACCATTCCCGCCATCGCCATGTCCGTTAATGGCACCCTCAAAATCCCCACCACTACTTCTTCTTC
CTCCAACCAAGAACAACCCGCCGCCGCCGCCGACCAATCCTCCGCTAAGAAGCGCCGTAAACGCCCCGCTAACAGCGACTACGTTGACGTAAACGACGCCGTCGCCGTCG
CCGTCTCCAACGGTGTCGTTCAGGCCGCCGCTCAACAGCCGGCTTTTCCTCCTGGTTTGGTTCCAGTGTGGGCCATCCCATCCAACGCCATAATCCCCGGCGCGGTTTTC
ATGGTTCCATCCGTCGCCTGCTCCTCCTCCCGCCCGCAGTTATTCTCATTCCCGACTCCAACGCCGCCGCCGCCGCCGCCCGTCAACACCGCGGCGAGGCCCATTTCTTC
CGTTCCGTCGAGCAAGCCCGAGCCGTCTCACATTCACTCCAGCCCCACCAATCAAAGCTCCACCACTTCAAGCTCTTCCGTCTCGAAGTCTCAATCCGTCATGGCGCCGA
TCTCGACCTCCACCGTCCCGACGAGCAGCAGTTCCACAAAAACGACGACGCAGATGCTGAGAGACTTCTCGTTAGAGATTTACGATAAAGAAGAG
Protein sequenceShow/hide protein sequence
MADFQKQELHEHHDSPPPPPPADSSPMDLLALAPKQELPDSSGIQLVNFTAEIAKTVSSLPPKRASTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWL
LERAEPAIIAATGTGTIPAIAMSVNGTLKIPTTTSSSSNQEQPAAAADQSSAKKRRKRPANSDYVDVNDAVAVAVSNGVVQAAAQQPAFPPGLVPVWAIPSNAIIPGAVF
MVPSVACSSSRPQLFSFPTPTPPPPPPVNTAARPISSVPSSKPEPSHIHSSPTNQSSTTSSSSVSKSQSVMAPISTSTVPTSSSSTKTTTQMLRDFSLEIYDKEE