; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007950 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007950
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlutaredoxin domain-containing protein
Genome locationscaffold13:2698497..2698796
RNA-Seq ExpressionMS007950
SyntenyMS007950
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0097573 - glutathione oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646327.1 hypothetical protein Csa_015602 [Cucumis sativus]3.6e-4894.95Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW
        RLRNLASQKAVVIFSKSSCYICHS+QTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIW
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW

XP_008451630.1 PREDICTED: glutaredoxin-C11 [Cucumis melo]1.2e-4895Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        RLRNLASQKAVVIFSKSSCYICHS+QTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

XP_022146613.1 glutaredoxin-C11 [Momordica charantia]7.2e-4998.99Show/hide
Query:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        LRNLASQKAVVIFSKSSCYICHSVQTLFYELG SPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
Subjt:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

XP_022954101.1 glutaredoxin-C11-like [Cucurbita moschata]4.2e-4997Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        RLRNLASQKAVVIFSKSSCYICHS+QTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

XP_038876720.1 glutaredoxin-C11 [Benincasa hispida]9.3e-4996Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        RLRNLASQKAVVIFSKSSCYICHS+QTLFYELGASPAIHELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

TrEMBL top hitse value%identityAlignment
A0A0A0K7M4 Glutaredoxin domain-containing protein5.9e-4995Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        RLRNLASQKAVVIFSKSSCYICHS+QTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

A0A5A7VIX0 Glutaredoxin-C11-like5.9e-4995Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        RLRNLASQKAVVIFSKSSCYICHS+QTLFYELGASPA+HELDH+ANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

A0A6J1CZ09 glutaredoxin-C113.5e-4998.99Show/hide
Query:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        LRNLASQKAVVIFSKSSCYICHSVQTLFYELG SPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
Subjt:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

A0A6J1GPY2 glutaredoxin-C11-like2.0e-4997Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        RLRNLASQKAVVIFSKSSCYICHS+QTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

A0A6J1JXM7 glutaredoxin-C11-like isoform X22.0e-4997Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        RLRNLASQKAVVIFSKSSCYICHS+QTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIG++KDVISLHVNGDLKQMLIDAKAIWL
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

SwissProt top hitse value%identityAlignment
O23421 Monothiol glutaredoxin-S34.9e-2451.52Show/hide
Query:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        L+ + S+K+VVIFSK+SC + H+++TLF +LG +P I+ELD  + G+EI+ AL  LGC+P+VP VFIGG+ +G +  V+SLH+N  L  ML  A A+WL
Subjt:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

O82254 Putative glutaredoxin-C124.8e-3264.36Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWAL-RGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW
        R+R+LAS+KA VIF+KSSC +CHS++TLFYELGASPAIHELD +  G +++ AL R  G NP+VPAVF+GG+++G++KDVIS HV+G LKQML  + AIW
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWAL-RGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW

Query:  L
        L
Subjt:  L

Q0JG89 Putative glutaredoxin-C24.9e-2452.48Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGL-GCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW
        R+  L+SQ+AVVIF  S+C++CH V+TLF ELG S A+HE+D + NG++++ AL G+ G  P VPAVFIGGK +G +  V+SLH+ G L  +L +A A+W
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGL-GCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW

Query:  L
        L
Subjt:  L

Q9LIF1 Monothiol glutaredoxin-S102.9e-2959.38Show/hide
Query:  LASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        LASQ+AVVIFSKS+C + H+++ LFYE G SPAI E+D +  G++I+WAL  LGC+P+VPAVF+GGKF+GT+  V++LH+NG LK +L +A A+WL
Subjt:  LASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

Q9LYC6 Glutaredoxin-C111.6e-3569.31Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLG-CNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW
        R+R+L+S+KA VIF+KSSC +CHS++TLFYELGASPAIHELD +  GRE++ ALR LG  NP+VPAVF+GG++IG++KD+IS HV+G LKQML DAKAIW
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLG-CNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW

Query:  L
        L
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT2G47870.1 Thioredoxin superfamily protein3.4e-3364.36Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWAL-RGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW
        R+R+LAS+KA VIF+KSSC +CHS++TLFYELGASPAIHELD +  G +++ AL R  G NP+VPAVF+GG+++G++KDVIS HV+G LKQML  + AIW
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWAL-RGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW

Query:  L
        L
Subjt:  L

AT3G21460.1 Glutaredoxin family protein2.1e-3059.38Show/hide
Query:  LASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        LASQ+AVVIFSKS+C + H+++ LFYE G SPAI E+D +  G++I+WAL  LGC+P+VPAVF+GGKF+GT+  V++LH+NG LK +L +A A+WL
Subjt:  LASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

AT3G62950.1 Thioredoxin superfamily protein1.1e-3669.31Show/hide
Query:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLG-CNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW
        R+R+L+S+KA VIF+KSSC +CHS++TLFYELGASPAIHELD +  GRE++ ALR LG  NP+VPAVF+GG++IG++KD+IS HV+G LKQML DAKAIW
Subjt:  RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLG-CNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIW

Query:  L
        L
Subjt:  L

AT4G15690.1 Thioredoxin superfamily protein2.2e-2451.52Show/hide
Query:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        L+ + S+K+VVIFSK+SC + H+++TLF + G +P I+ELD    GREI+ AL  LGC+P+VP VFIGG+ +G +  V+SLH+N  L  ML  A A+WL
Subjt:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL

AT4G15700.1 Thioredoxin superfamily protein3.4e-2551.52Show/hide
Query:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL
        L+ + S+K+VVIFSK+SC + H+++TLF +LG +P I+ELD  + G+EI+ AL  LGC+P+VP VFIGG+ +G +  V+SLH+N  L  ML  A A+WL
Subjt:  LRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATTGAGAAACTTGGCATCACAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGTCATAGCGTCCAGACACTTTTTTATGAGCTTGGTGCGAGCCCTGC
AATTCATGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCTTCTGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAG
GTACATCAAAAGATGTTATTTCTCTCCATGTTAATGGGGACCTGAAACAAATGTTGATAGATGCGAAGGCCATCTGGTTG
mRNA sequenceShow/hide mRNA sequence
AGATTGAGAAACTTGGCATCACAGAAAGCAGTAGTGATTTTTTCCAAGAGCTCATGCTACATATGTCATAGCGTCCAGACACTTTTTTATGAGCTTGGTGCGAGCCCTGC
AATTCATGAGCTTGACCATGAAGCAAATGGGCGAGAAATTGATTGGGCTCTTAGAGGTCTAGGGTGCAACCCTTCTGTTCCAGCTGTGTTCATAGGAGGAAAGTTTATAG
GTACATCAAAAGATGTTATTTCTCTCCATGTTAATGGGGACCTGAAACAAATGTTGATAGATGCGAAGGCCATCTGGTTG
Protein sequenceShow/hide protein sequence
RLRNLASQKAVVIFSKSSCYICHSVQTLFYELGASPAIHELDHEANGREIDWALRGLGCNPSVPAVFIGGKFIGTSKDVISLHVNGDLKQMLIDAKAIWL